RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 PSDA5PKW4 1024 aaPredicted RBP19.88■□□□□ 0.77
NCK1-201ENST00000288986 GNPATO15228 680 aa19.88■□□□□ 0.77
NCK1-201ENST00000288986 SLFN5Q08AF3 891 aa19.88■□□□□ 0.77
NCK1-201ENST00000288986 MYH16Q9H6N6 1097 aa19.88■□□□□ 0.77
NCK1-201ENST00000288986 ELL2O00472 640 aaPredicted RBP19.88■□□□□ 0.77
NCK1-201ENST00000288986 RC3H1Q5TC82 1133 aaKnown RBP19.88■□□□□ 0.77
NCK1-201ENST00000288986 ZNF831Q5JPB2 1677 aa19.87■□□□□ 0.77
NCK1-201ENST00000288986 CNTNAP4Q9C0A0 1308 aa19.87■□□□□ 0.77
NCK1-201ENST00000288986 DUSP27Q5VZP5 1158 aa19.87■□□□□ 0.77
NCK1-201ENST00000288986 CCDC87Q9NVE4 849 aa19.87■□□□□ 0.77
NCK1-201ENST00000288986 FANCIQ9NVI1 1328 aa19.87■□□□□ 0.77
NCK1-201ENST00000288986 TAF1LQ8IZX4 1826 aa19.87■□□□□ 0.77
NCK1-201ENST00000288986 PHF14O94880 888 aa19.86■□□□□ 0.77
NCK1-201ENST00000288986 EIF2S2P20042 333 aaKnown RBP19.86■□□□□ 0.77
NCK1-201ENST00000288986 INTS5Q6P9B9 1019 aaKnown RBP19.86■□□□□ 0.77
NCK1-201ENST00000288986 RTCBQ9Y3I0 505 aaKnown RBP19.86■□□□□ 0.77
NCK1-201ENST00000288986 C4BP0C0L5 1744 aa19.86■□□□□ 0.77
NCK1-201ENST00000288986 A1BGP04217 495 aa19.86■□□□□ 0.77
NCK1-201ENST00000288986 CANXP27824 592 aaKnown RBP19.86■□□□□ 0.77
NCK1-201ENST00000288986 SMIM5Q71RC9 77 aa19.86■□□□□ 0.77
NCK1-201ENST00000288986 TJP1Q07157 1748 aa19.85■□□□□ 0.77
NCK1-201ENST00000288986 E9PSI1 815 aa19.85■□□□□ 0.77
NCK1-201ENST00000288986 C8orf58Q8NAV2 365 aa19.85■□□□□ 0.77
NCK1-201ENST00000288986 ZBTB1Q9Y2K1 713 aa19.85■□□□□ 0.77
NCK1-201ENST00000288986 AMIGO3Q86WK7 504 aa19.84■□□□□ 0.77
NCK1-201ENST00000288986 MSH5O43196 834 aa19.84■□□□□ 0.77
NCK1-201ENST00000288986 RPS6KA4O75676 772 aa19.84■□□□□ 0.77
NCK1-201ENST00000288986 PIP4K2AP48426 406 aaPredicted RBP19.84■□□□□ 0.77
NCK1-201ENST00000288986 NECTIN2Q92692 538 aa19.84■□□□□ 0.77
NCK1-201ENST00000288986 ZNF330Q9Y3S2 320 aaPredicted RBP19.84■□□□□ 0.77
NCK1-201ENST00000288986 SRCAPQ6ZRS2 3230 aa19.84■□□□□ 0.77
NCK1-201ENST00000288986 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.83■□□□□ 0.77
NCK1-201ENST00000288986 COL5A3P25940 1745 aaPredicted RBP19.83■□□□□ 0.76
NCK1-201ENST00000288986 SSFA2P28290 1259 aa19.82■□□□□ 0.76
NCK1-201ENST00000288986 TRAPPC3LQ5T215 181 aa19.82■□□□□ 0.76
NCK1-201ENST00000288986 NPM2Q86SE8 214 aaKnown RBP19.82■□□□□ 0.76
NCK1-201ENST00000288986 TSPYL6Q8N831 410 aa19.82■□□□□ 0.76
NCK1-201ENST00000288986 PNPLA7Q6ZV29 1317 aa19.82■□□□□ 0.76
NCK1-201ENST00000288986 NEFLP07196 543 aa19.82■□□□□ 0.76
NCK1-201ENST00000288986 HOXB7P09629 217 aa19.82■□□□□ 0.76
NCK1-201ENST00000288986 EXOSC9Q06265 439 aaKnown RBP19.82■□□□□ 0.76
NCK1-201ENST00000288986 FLAD1Q8NFF5 587 aa19.82■□□□□ 0.76
NCK1-201ENST00000288986 CICQ96RK0 1608 aaPredicted RBP19.82■□□□□ 0.76
NCK1-201ENST00000288986 HDGFL1Q5TGJ6 251 aa19.81■□□□□ 0.76
NCK1-201ENST00000288986 COL23A1Q86Y22 540 aaPredicted RBP19.81■□□□□ 0.76
NCK1-201ENST00000288986 PDGFDQ9GZP0 370 aaPredicted RBP19.81■□□□□ 0.76
NCK1-201ENST00000288986 MYH14Q7Z406 1995 aaKnown RBP19.81■□□□□ 0.76
NCK1-201ENST00000288986 TWISTNBQ3B726 338 aaPredicted RBP19.8■□□□□ 0.76
NCK1-201ENST00000288986 FKBP8Q14318 412 aa19.8■□□□□ 0.76
NCK1-201ENST00000288986 ARHGEF1Q92888 912 aaKnown RBP19.8■□□□□ 0.76
NCK1-201ENST00000288986 ARXQ96QS3 562 aa19.8■□□□□ 0.76
NCK1-201ENST00000288986 RCAN3Q9UKA8 241 aa19.8■□□□□ 0.76
NCK1-201ENST00000288986 MYL6BP14649 208 aa19.79■□□□□ 0.76
NCK1-201ENST00000288986 IL6STP40189 918 aaPredicted RBP19.79■□□□□ 0.76
NCK1-201ENST00000288986 NBPF26B4DH59 902 aa19.78■□□□□ 0.76
NCK1-201ENST00000288986 ADRA2BP18089 450 aa19.78■□□□□ 0.76
NCK1-201ENST00000288986 RFC4P35249 363 aa19.78■□□□□ 0.76
NCK1-201ENST00000288986 NBPF10Q6P3W6 841 aaKnown RBP19.78■□□□□ 0.76
NCK1-201ENST00000288986 NBPF15Q8N660 670 aa19.78■□□□□ 0.76
NCK1-201ENST00000288986 SOS1Q07889 1333 aaPredicted RBP19.78■□□□□ 0.76
NCK1-201ENST00000288986 EIF5P55010 431 aaKnown RBP19.78■□□□□ 0.76
NCK1-201ENST00000288986 CHMP4AQ9BY43 222 aa19.77■□□□□ 0.76
NCK1-201ENST00000288986 COL15A1P39059 1388 aa19.76■□□□□ 0.75
NCK1-201ENST00000288986 ANXA1P04083 346 aa19.76■□□□□ 0.75
NCK1-201ENST00000288986 CCDC30Q5VVM6 783 aa19.76■□□□□ 0.75
NCK1-201ENST00000288986 CHPF2Q9P2E5 772 aa19.76■□□□□ 0.75
NCK1-201ENST00000288986 UBR3Q6ZT12 1888 aa19.75■□□□□ 0.75
NCK1-201ENST00000288986 ERBB4Q15303 1308 aa19.75■□□□□ 0.75
NCK1-201ENST00000288986 VAMP4O75379 141 aa19.75■□□□□ 0.75
NCK1-201ENST00000288986 PDIA6Q15084 440 aa19.75■□□□□ 0.75
NCK1-201ENST00000288986 ERICH6BQ5W0A0 696 aa19.75■□□□□ 0.75
NCK1-201ENST00000288986 DBF4Q9UBU7 674 aaPredicted RBP19.75■□□□□ 0.75
NCK1-201ENST00000288986 TBC1D2BQ9UPU7 963 aa19.75■□□□□ 0.75
NCK1-201ENST00000288986 ZPR1O75312 459 aa19.74■□□□□ 0.75
NCK1-201ENST00000288986 ZBTB7AO95365 584 aa19.74■□□□□ 0.75
NCK1-201ENST00000288986 PROSER3Q2NL68 480 aa19.74■□□□□ 0.75
NCK1-201ENST00000288986 LAMB4A4D0S4 1761 aa19.74■□□□□ 0.75
NCK1-201ENST00000288986 A0A087WZG4 1122 aa19.74■□□□□ 0.75
NCK1-201ENST00000288986 TCERG1O14776 1098 aaKnown RBP19.74■□□□□ 0.75
NCK1-201ENST00000288986 DDX21Q9NR30 783 aaKnown RBP eCLIP19.74■□□□□ 0.75
NCK1-201ENST00000288986 SLC16A10Q8TF71 515 aa19.73■□□□□ 0.75
NCK1-201ENST00000288986 TUBGCP6Q96RT7 1819 aa19.73■□□□□ 0.75
NCK1-201ENST00000288986 DZIP3Q86Y13 1208 aaKnown RBP19.72■□□□□ 0.75
NCK1-201ENST00000288986 STK31Q9BXU1 1019 aa19.72■□□□□ 0.75
NCK1-201ENST00000288986 SRP68Q9UHB9 627 aaKnown RBP19.72■□□□□ 0.75
NCK1-201ENST00000288986 ATF5Q9Y2D1 282 aaPredicted RBP19.72■□□□□ 0.75
NCK1-201ENST00000288986 RRP1P56182 461 aaKnown RBP19.71■□□□□ 0.75
NCK1-201ENST00000288986 AIMP1Q12904 312 aaKnown RBP19.71■□□□□ 0.75
NCK1-201ENST00000288986 USPL1Q5W0Q7 1092 aa19.71■□□□□ 0.75
NCK1-201ENST00000288986 MSL1Q68DK7 614 aa19.71■□□□□ 0.75
NCK1-201ENST00000288986 NARFQ9UHQ1 456 aa19.71■□□□□ 0.75
NCK1-201ENST00000288986 USP42Q9H9J4 1324 aaKnown RBP19.71■□□□□ 0.75
NCK1-201ENST00000288986 MTFR1LQ9H019 292 aa19.7■□□□□ 0.74
NCK1-201ENST00000288986 HYPKQ9NX55 129 aa19.7■□□□□ 0.74
NCK1-201ENST00000288986 QSER1Q2KHR3 1735 aa19.7■□□□□ 0.74
NCK1-201ENST00000288986 SLC4A2P04920 1241 aa19.7■□□□□ 0.74
NCK1-201ENST00000288986 COPS6Q7L5N1 327 aa19.7■□□□□ 0.74
NCK1-201ENST00000288986 LRP10Q7Z4F1 713 aa19.7■□□□□ 0.74
NCK1-201ENST00000288986 GYS1P13807 737 aa19.69■□□□□ 0.74
NCK1-201ENST00000288986 TTLL7Q6ZT98 887 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms