RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 STARD3NLO95772 234 aa27.03■■□□□ 1.92
RAB28-201ENST00000288723 CANXP27824 592 aaKnown RBP27.03■■□□□ 1.92
RAB28-201ENST00000288723 NLGN2Q8NFZ4 835 aa27.03■■□□□ 1.92
RAB28-201ENST00000288723 SOS1Q07889 1333 aaPredicted RBP27.03■■□□□ 1.92
RAB28-201ENST00000288723 TMPOP42166 694 aaKnown RBP27.02■■□□□ 1.92
RAB28-201ENST00000288723 NEUROD2Q15784 382 aa27.02■■□□□ 1.92
RAB28-201ENST00000288723 PRAMEF22A3QJZ6 481 aa27.02■■□□□ 1.92
RAB28-201ENST00000288723 MMP10P09238 476 aa27.02■■□□□ 1.92
RAB28-201ENST00000288723 RUNDC1Q96C34 613 aa27.01■■□□□ 1.91
RAB28-201ENST00000288723 C4AP0C0L4 1744 aa27.01■■□□□ 1.91
RAB28-201ENST00000288723 NLGN1Q8N2Q7 840 aa27■■□□□ 1.91
RAB28-201ENST00000288723 TEX13AQ9BXU3 409 aaPredicted RBP27■■□□□ 1.91
RAB28-201ENST00000288723 USP16Q9Y5T5 823 aa27■■□□□ 1.91
RAB28-201ENST00000288723 USP42Q9H9J4 1324 aaKnown RBP26.99■■□□□ 1.91
RAB28-201ENST00000288723 UTRNP46939 3433 aa26.98■■□□□ 1.91
RAB28-201ENST00000288723 DCAF8L1A6NGE4 600 aa26.98■■□□□ 1.91
RAB28-201ENST00000288723 A1BGP04217 495 aa26.98■■□□□ 1.91
RAB28-201ENST00000288723 GOLGB1Q14789 3259 aaKnown RBP26.98■■□□□ 1.91
RAB28-201ENST00000288723 ANP32CO43423 234 aa26.97■■□□□ 1.91
RAB28-201ENST00000288723 FKBP8Q14318 412 aa26.97■■□□□ 1.91
RAB28-201ENST00000288723 COL15A1P39059 1388 aa26.97■■□□□ 1.91
RAB28-201ENST00000288723 USPL1Q5W0Q7 1092 aa26.97■■□□□ 1.91
RAB28-201ENST00000288723 ZPR1O75312 459 aa26.96■■□□□ 1.91
RAB28-201ENST00000288723 SNRPA1P09661 255 aaKnown RBP26.96■■□□□ 1.91
RAB28-201ENST00000288723 ZNF330Q9Y3S2 320 aaPredicted RBP26.96■■□□□ 1.91
RAB28-201ENST00000288723 PIP4K2AP48426 406 aaPredicted RBP26.95■■□□□ 1.91
RAB28-201ENST00000288723 PNISRQ8TF01 805 aaKnown RBP26.95■■□□□ 1.91
RAB28-201ENST00000288723 EIF5P55010 431 aaKnown RBP26.95■■□□□ 1.9
RAB28-201ENST00000288723 CD2APQ9Y5K6 639 aa26.94■■□□□ 1.9
RAB28-201ENST00000288723 LMOD3Q0VAK6 560 aa26.93■■□□□ 1.9
RAB28-201ENST00000288723 PELP1Q8IZL8 1130 aaKnown RBP26.93■■□□□ 1.9
RAB28-201ENST00000288723 NARFQ9UHQ1 456 aa26.93■■□□□ 1.9
RAB28-201ENST00000288723 TRIM35Q9UPQ4 493 aa26.92■■□□□ 1.9
RAB28-201ENST00000288723 EIF4A1P60842 406 aaKnown RBP26.9■■□□□ 1.9
RAB28-201ENST00000288723 PARP3Q9Y6F1 533 aa26.9■■□□□ 1.9
RAB28-201ENST00000288723 GPR162Q16538 588 aa26.9■■□□□ 1.9
RAB28-201ENST00000288723 BCL2L12Q9HB09 334 aa26.9■■□□□ 1.9
RAB28-201ENST00000288723 TSPYL4Q9UJ04 414 aa26.9■■□□□ 1.9
RAB28-201ENST00000288723 TBC1D2BQ9UPU7 963 aa26.9■■□□□ 1.9
RAB28-201ENST00000288723 KDM3BQ7LBC6 1761 aa26.89■■□□□ 1.9
RAB28-201ENST00000288723 APAF1O14727 1248 aa26.89■■□□□ 1.9
RAB28-201ENST00000288723 IL6STP40189 918 aaPredicted RBP26.89■■□□□ 1.9
RAB28-201ENST00000288723 DDR1Q08345 913 aa26.89■■□□□ 1.9
RAB28-201ENST00000288723 MRS2Q9HD23 443 aa26.88■■□□□ 1.89
RAB28-201ENST00000288723 WWC3Q9ULE0 1092 aa26.88■■□□□ 1.89
RAB28-201ENST00000288723 A0A087WZG4 1122 aa26.87■■□□□ 1.89
RAB28-201ENST00000288723 GIGYF1O75420 1035 aaPredicted RBP26.87■■□□□ 1.89
RAB28-201ENST00000288723 TM4SF1P30408 202 aa26.87■■□□□ 1.89
RAB28-201ENST00000288723 NBPF26B4DH59 902 aa26.86■■□□□ 1.89
RAB28-201ENST00000288723 NBPF10Q6P3W6 841 aaKnown RBP26.86■■□□□ 1.89
RAB28-201ENST00000288723 NPM2Q86SE8 214 aaKnown RBP26.86■■□□□ 1.89
RAB28-201ENST00000288723 NBPF15Q8N660 670 aa26.86■■□□□ 1.89
RAB28-201ENST00000288723 LAS1LQ9Y4W2 734 aaKnown RBP26.86■■□□□ 1.89
RAB28-201ENST00000288723 SENP3-EIF4A1A0A087X0R7 540 aa26.85■■□□□ 1.89
RAB28-201ENST00000288723 NFIXQ14938 502 aa26.85■■□□□ 1.89
RAB28-201ENST00000288723 POLRMTO00411 1230 aaKnown RBP26.84■■□□□ 1.89
RAB28-201ENST00000288723 BICDL1Q6ZP65 573 aa26.83■■□□□ 1.89
RAB28-201ENST00000288723 YBX3P16989 372 aaKnown RBP eCLIP26.83■■□□□ 1.89
RAB28-201ENST00000288723 DZIP3Q86Y13 1208 aaKnown RBP26.81■■□□□ 1.88
RAB28-201ENST00000288723 C10orf71Q711Q0 1435 aa26.81■■□□□ 1.88
RAB28-201ENST00000288723 CAMTA2O94983 1202 aa26.8■■□□□ 1.88
RAB28-201ENST00000288723 TBC1D9BQ66K14 1250 aa26.8■■□□□ 1.88
RAB28-201ENST00000288723 BABAM1Q9NWV8 329 aa26.8■■□□□ 1.88
RAB28-201ENST00000288723 A0A0G2JLW4 131 aa26.79■■□□□ 1.88
RAB28-201ENST00000288723 CHL1O00533 1208 aa26.79■■□□□ 1.88
RAB28-201ENST00000288723 NGEFQ8N5V2 710 aa26.79■■□□□ 1.88
RAB28-201ENST00000288723 YY1P25490 414 aa26.77■■□□□ 1.88
RAB28-201ENST00000288723 KRT24Q2M2I5 525 aa26.77■■□□□ 1.88
RAB28-201ENST00000288723 PXDNLA1KZ92 1463 aa26.77■■□□□ 1.88
RAB28-201ENST00000288723 LAMB4A4D0S4 1761 aa26.77■■□□□ 1.88
RAB28-201ENST00000288723 SERPINB2P05120 415 aa26.76■■□□□ 1.88
RAB28-201ENST00000288723 TGFB2P61812 414 aa26.76■■□□□ 1.88
RAB28-201ENST00000288723 DPEP1P16444 411 aa26.76■■□□□ 1.87
RAB28-201ENST00000288723 EIF2S2P20042 333 aaKnown RBP26.76■■□□□ 1.87
RAB28-201ENST00000288723 KIF13BQ9NQT8 1826 aa26.76■■□□□ 1.87
RAB28-201ENST00000288723 MYL6BP14649 208 aa26.75■■□□□ 1.87
RAB28-201ENST00000288723 SCN7AQ01118 1682 aa26.75■■□□□ 1.87
RAB28-201ENST00000288723 N4BP2Q86UW6 1770 aaPredicted RBP26.74■■□□□ 1.87
RAB28-201ENST00000288723 NECTIN2Q92692 538 aa26.74■■□□□ 1.87
RAB28-201ENST00000288723 CFAP44Q96MT7 982 aa26.74■■□□□ 1.87
RAB28-201ENST00000288723 KIAA1551Q9HCM1 1747 aa26.72■■□□□ 1.87
RAB28-201ENST00000288723 GRIN3BO60391 1043 aa26.72■■□□□ 1.87
RAB28-201ENST00000288723 KCNA3P22001 575 aa26.71■■□□□ 1.87
RAB28-201ENST00000288723 CHRNA5P30532 468 aa26.71■■□□□ 1.87
RAB28-201ENST00000288723 CCDC24Q8N4L8 307 aa26.71■■□□□ 1.87
RAB28-201ENST00000288723 SETDB2Q96T68 719 aa26.71■■□□□ 1.87
RAB28-201ENST00000288723 MBIPQ9NS73 344 aa26.71■■□□□ 1.87
RAB28-201ENST00000288723 AFDNP55196 1824 aaKnown RBP26.71■■□□□ 1.87
RAB28-201ENST00000288723 ANXA1P04083 346 aa26.69■■□□□ 1.86
RAB28-201ENST00000288723 ZNF853P0CG23 659 aa26.69■■□□□ 1.86
RAB28-201ENST00000288723 HLFQ16534 295 aa26.69■■□□□ 1.86
RAB28-201ENST00000288723 TTLL7Q6ZT98 887 aa26.69■■□□□ 1.86
RAB28-201ENST00000288723 FAM9BQ8IZU0 186 aa26.69■■□□□ 1.86
RAB28-201ENST00000288723 BCORQ6W2J9 1755 aa26.69■■□□□ 1.86
RAB28-201ENST00000288723 CARMIL3Q8ND23 1372 aa26.68■■□□□ 1.86
RAB28-201ENST00000288723 PDIA6Q15084 440 aa26.68■■□□□ 1.86
RAB28-201ENST00000288723 PROSER3Q2NL68 480 aa26.68■■□□□ 1.86
RAB28-201ENST00000288723 CLEC4GQ6UXB4 293 aa26.68■■□□□ 1.86
RAB28-201ENST00000288723 BCS1LQ9Y276 419 aa26.68■■□□□ 1.86
RAB28-201ENST00000288723 NRXN2Q9P2S2 1712 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms