RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 URB2Q14146 1524 aaKnown RBP3.55□□□□□ -1.84
CHD1-201ENST00000284049 PPP2R5AQ15172 486 aa3.55□□□□□ -1.84
CHD1-201ENST00000284049 IPO9Q96P70 1041 aaKnown RBP3.55□□□□□ -1.84
CHD1-201ENST00000284049 MAP10Q9P2G4 905 aa3.55□□□□□ -1.84
CHD1-201ENST00000284049 NESP48681 1621 aa3.55□□□□□ -1.84
CHD1-201ENST00000284049 IFT140Q96RY7 1462 aa3.55□□□□□ -1.84
CHD1-201ENST00000284049 KIF3CO14782 793 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 ZBTB24O43167 697 aaPredicted RBP3.54□□□□□ -1.84
CHD1-201ENST00000284049 TRIM37O94972 964 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 EIF4BP23588 611 aaKnown RBP3.54□□□□□ -1.84
CHD1-201ENST00000284049 LMOD3Q0VAK6 560 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 TMEM92Q6UXU6 159 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 HELQQ8TDG4 1101 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 ARMC5Q96C12 935 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 IRF2BPLQ9H1B7 796 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 TTF2Q9UNY4 1162 aaKnown RBP3.54□□□□□ -1.84
CHD1-201ENST00000284049 PRKAB1Q9Y478 270 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 CUL7Q14999 1698 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 KRT18P05783 430 aaKnown RBP3.54□□□□□ -1.84
CHD1-201ENST00000284049 TAS1R3Q7RTX0 852 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 FANCLQ9NW38 375 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 CUX1P39880 1505 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 CREB3O43889 395 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 MAP4K4O95819 1239 aaPredicted RBP3.54□□□□□ -1.84
CHD1-201ENST00000284049 IRX6P78412 446 aaPredicted RBP3.54□□□□□ -1.84
CHD1-201ENST00000284049 WWC2Q6AWC2 1192 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 C1orf216Q8TAB5 229 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 PRXQ9BXM0 1461 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 TCERG1O14776 1098 aaKnown RBP3.54□□□□□ -1.84
CHD1-201ENST00000284049 P4HBP07237 508 aaKnown RBP3.54□□□□□ -1.84
CHD1-201ENST00000284049 NFX1Q12986 1120 aaKnown RBP3.54□□□□□ -1.84
CHD1-201ENST00000284049 PPP2R5EQ16537 467 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 NUDT12Q9BQG2 462 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 STIM2Q9P246 746 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 PRC1O43663 620 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 SLC10A3P09131 477 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 CPEP16870 476 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 SPACA7Q96KW9 195 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 USB1Q9BQ65 265 aaKnown RBP3.54□□□□□ -1.84
CHD1-201ENST00000284049 COMMD10Q9Y6G5 202 aa3.54□□□□□ -1.84
CHD1-201ENST00000284049 KIF21BO75037 1637 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 APOBRQ0VD83 1088 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 ATL2Q8NHH9 583 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 RPS6KC1Q96S38 1066 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 TMC4Q7Z404 712 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 FERD3LQ96RJ6 166 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 RBSNQ9H1K0 784 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 PCDH12Q9NPG4 1184 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 WWC3Q9ULE0 1092 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 SLC27A5Q9Y2P5 690 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 GPSM3Q9Y4H4 160 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 KIF21AQ7Z4S6 1674 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 ZFYVE27Q5T4F4 411 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 BCL2L12Q9HB09 334 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 KIAA1024Q9UPX6 916 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 PPM1FP49593 454 aaPredicted RBP3.53□□□□□ -1.84
CHD1-201ENST00000284049 ZRSR2Q15696 482 aaKnown RBP3.53□□□□□ -1.84
CHD1-201ENST00000284049 NBPF6Q5VWK0 638 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 PDXDC2PQ6P474 469 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 BPHLQ86WA6 291 aaPredicted RBP3.53□□□□□ -1.84
CHD1-201ENST00000284049 NBPF4Q96M43 638 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 EFR3BQ9Y2G0 817 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 ERBB3P21860 1342 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 TRIM6-TRIM34B2RNG4 842 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 GTF2E1P29083 439 aaPredicted RBP3.53□□□□□ -1.84
CHD1-201ENST00000284049 DOK7Q18PE1 504 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 EGFLAMQ63HQ2 1017 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 GPKOWQ92917 476 aaPredicted RBP eCLIP3.53□□□□□ -1.844e-6■□□□□ 10.1
CHD1-201ENST00000284049 FRMD6Q96NE9 622 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 SMAD5Q99717 465 aaKnown RBP3.53□□□□□ -1.84
CHD1-201ENST00000284049 CCDC87Q9NVE4 849 aa3.53□□□□□ -1.84
CHD1-201ENST00000284049 MAGI1Q96QZ7 1491 aaPredicted RBP3.53□□□□□ -1.85
CHD1-201ENST00000284049 FANCD2Q9BXW9 1451 aa3.53□□□□□ -1.85
CHD1-201ENST00000284049 XRCC5P13010 732 aaKnown RBP3.52□□□□□ -1.85
CHD1-201ENST00000284049 GPATCH11Q8N954 259 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 GPRASP2Q96D09 838 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 FAM198AQ9UFP1 575 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 PCDHB3Q9Y5E6 796 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 OPLAHO14841 1288 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 TREHO43280 583 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 GALR2O43603 387 aaPredicted RBP3.52□□□□□ -1.85
CHD1-201ENST00000284049 GADD45BO75293 160 aaPredicted RBP3.52□□□□□ -1.85
CHD1-201ENST00000284049 IFIT2P09913 472 aaKnown RBP3.52□□□□□ -1.85
CHD1-201ENST00000284049 NBPF7P0C2Y1 421 aaPredicted RBP3.52□□□□□ -1.85
CHD1-201ENST00000284049 PWP1Q13610 501 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 SIX5Q8N196 739 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 EMILIN1Q9Y6C2 1016 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 CLASP1Q7Z460 1538 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 NASPP49321 788 aaPredicted RBP3.52□□□□□ -1.85
CHD1-201ENST00000284049 FANCCQ00597 558 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 PAK2Q13177 524 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 TCEAL1Q15170 157 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 DESI1Q6ICB0 168 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 SMC5Q8IY18 1101 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 TMEM121BQ9BXQ6 578 aaPredicted RBP3.52□□□□□ -1.85
CHD1-201ENST00000284049 FAM13BQ9NYF5 915 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 TSKSQ9UJT2 592 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 NUP160Q12769 1436 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 JAZF1Q86VZ6 243 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 AIDAQ96BJ3 306 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms