RNA–Protein interactions for RNA: ENST00000280780.6

FAM53B-201, Transcript of family with sequence similarity 53 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM53B, Length 1,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53B-201ENST00000280780 COL23A1Q86Y22 540 aaPredicted RBP28.95■■■□□ 2.22
FAM53B-201ENST00000280780 DNAJC10Q8IXB1 793 aa28.95■■■□□ 2.22
FAM53B-201ENST00000280780 COL5A3P25940 1745 aaPredicted RBP28.95■■■□□ 2.22
FAM53B-201ENST00000280780 QSER1Q2KHR3 1735 aa28.94■■■□□ 2.22
FAM53B-201ENST00000280780 EXOSC9Q06265 439 aaKnown RBP28.93■■■□□ 2.22
FAM53B-201ENST00000280780 UBR3Q6ZT12 1888 aa28.93■■■□□ 2.22
FAM53B-201ENST00000280780 TTC5Q8N0Z6 440 aa28.92■■■□□ 2.22
FAM53B-201ENST00000280780 AK7Q96M32 723 aa28.92■■■□□ 2.22
FAM53B-201ENST00000280780 ATF5Q9Y2D1 282 aaPredicted RBP28.92■■■□□ 2.22
FAM53B-201ENST00000280780 EIF4A1P60842 406 aaKnown RBP28.91■■■□□ 2.22
FAM53B-201ENST00000280780 C8orf58Q8NAV2 365 aa28.91■■■□□ 2.22
FAM53B-201ENST00000280780 TSPYL6Q8N831 410 aa28.9■■■□□ 2.22
FAM53B-201ENST00000280780 GNPATO15228 680 aa28.89■■■□□ 2.22
FAM53B-201ENST00000280780 PHF14O94880 888 aa28.89■■■□□ 2.22
FAM53B-201ENST00000280780 HEG1Q9ULI3 1381 aa28.89■■■□□ 2.21
FAM53B-201ENST00000280780 PRAMEF22A3QJZ6 481 aa28.88■■■□□ 2.21
FAM53B-201ENST00000280780 CYP19A1P11511 503 aaPredicted RBP28.88■■■□□ 2.21
FAM53B-201ENST00000280780 CRKLP46109 303 aaKnown RBP28.88■■■□□ 2.21
FAM53B-201ENST00000280780 INTS5Q6P9B9 1019 aaKnown RBP28.88■■■□□ 2.21
FAM53B-201ENST00000280780 CICQ96RK0 1608 aaPredicted RBP28.88■■■□□ 2.21
FAM53B-201ENST00000280780 RC3H1Q5TC82 1133 aaKnown RBP28.88■■■□□ 2.21
FAM53B-201ENST00000280780 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.87■■■□□ 2.21
FAM53B-201ENST00000280780 VSIG10Q8N0Z9 540 aa28.87■■■□□ 2.21
FAM53B-201ENST00000280780 CNTNAP4Q9C0A0 1308 aa28.86■■■□□ 2.21
FAM53B-201ENST00000280780 ELL2O00472 640 aaPredicted RBP28.85■■■□□ 2.21
FAM53B-201ENST00000280780 MSH5O43196 834 aa28.85■■■□□ 2.21
FAM53B-201ENST00000280780 FMNL2Q96PY5 1086 aa28.85■■■□□ 2.21
FAM53B-201ENST00000280780 PTGER2P43116 358 aa28.84■■■□□ 2.21
FAM53B-201ENST00000280780 SPON1Q9HCB6 807 aa28.84■■■□□ 2.21
FAM53B-201ENST00000280780 LAMB4A4D0S4 1761 aa28.83■■■□□ 2.21
FAM53B-201ENST00000280780 RPS6KA4O75676 772 aa28.83■■■□□ 2.21
FAM53B-201ENST00000280780 HMGB2P26583 209 aaKnown RBP28.83■■■□□ 2.21
FAM53B-201ENST00000280780 SGIP1Q9BQI5 828 aa28.83■■■□□ 2.21
FAM53B-201ENST00000280780 MTFR1LQ9H019 292 aa28.83■■■□□ 2.21
FAM53B-201ENST00000280780 USP16Q9Y5T5 823 aa28.83■■■□□ 2.21
FAM53B-201ENST00000280780 LRP5O75197 1615 aa28.82■■■□□ 2.2
FAM53B-201ENST00000280780 SSFA2P28290 1259 aa28.82■■■□□ 2.2
FAM53B-201ENST00000280780 TWISTNBQ3B726 338 aaPredicted RBP28.82■■■□□ 2.2
FAM53B-201ENST00000280780 VAMP4O75379 141 aa28.81■■■□□ 2.2
FAM53B-201ENST00000280780 RTCBQ9Y3I0 505 aaKnown RBP28.81■■■□□ 2.2
FAM53B-201ENST00000280780 GIGYF1O75420 1035 aaPredicted RBP28.8■■■□□ 2.2
FAM53B-201ENST00000280780 ARHGEF1Q92888 912 aaKnown RBP28.8■■■□□ 2.2
FAM53B-201ENST00000280780 ZBTB1Q9Y2K1 713 aa28.8■■■□□ 2.2
FAM53B-201ENST00000280780 SLC16A10Q8TF71 515 aa28.79■■■□□ 2.2
FAM53B-201ENST00000280780 CCDC87Q9NVE4 849 aa28.79■■■□□ 2.2
FAM53B-201ENST00000280780 MSL1Q68DK7 614 aa28.79■■■□□ 2.2
FAM53B-201ENST00000280780 FLAD1Q8NFF5 587 aa28.79■■■□□ 2.2
FAM53B-201ENST00000280780 A1BGP04217 495 aa28.78■■■□□ 2.2
FAM53B-201ENST00000280780 TRAPPC3LQ5T215 181 aa28.78■■■□□ 2.2
FAM53B-201ENST00000280780 CT47B1P0C2W7 299 aaPredicted RBP28.76■■■□□ 2.19
FAM53B-201ENST00000280780 SNRPA1P09661 255 aaKnown RBP28.75■■■□□ 2.19
FAM53B-201ENST00000280780 PIP4K2AP48426 406 aaPredicted RBP28.75■■■□□ 2.19
FAM53B-201ENST00000280780 COL24A1Q17RW2 1714 aa28.75■■■□□ 2.19
FAM53B-201ENST00000280780 STARD3NLO95772 234 aa28.75■■■□□ 2.19
FAM53B-201ENST00000280780 HOXB7P09629 217 aa28.75■■■□□ 2.19
FAM53B-201ENST00000280780 CANXP27824 592 aaKnown RBP28.75■■■□□ 2.19
FAM53B-201ENST00000280780 GTF3C3Q9Y5Q9 886 aa28.75■■■□□ 2.19
FAM53B-201ENST00000280780 TEX13AQ9BXU3 409 aaPredicted RBP28.74■■■□□ 2.19
FAM53B-201ENST00000280780 RCAN3Q9UKA8 241 aa28.74■■■□□ 2.19
FAM53B-201ENST00000280780 SOS1Q07889 1333 aaPredicted RBP28.74■■■□□ 2.19
FAM53B-201ENST00000280780 RARSP54136 660 aaKnown RBP28.72■■■□□ 2.19
FAM53B-201ENST00000280780 SRP68Q9UHB9 627 aaKnown RBP28.72■■■□□ 2.19
FAM53B-201ENST00000280780 C4AP0C0L4 1744 aa28.72■■■□□ 2.19
FAM53B-201ENST00000280780 TCERG1O14776 1098 aaKnown RBP28.71■■■□□ 2.19
FAM53B-201ENST00000280780 SSH1Q8WYL5 1049 aa28.71■■■□□ 2.19
FAM53B-201ENST00000280780 NECTIN2Q92692 538 aa28.71■■■□□ 2.19
FAM53B-201ENST00000280780 CACNA1FO60840 1977 aa28.7■■■□□ 2.19
FAM53B-201ENST00000280780 ADRA2BP18089 450 aa28.7■■■□□ 2.18
FAM53B-201ENST00000280780 EIF5P55010 431 aaKnown RBP28.7■■■□□ 2.18
FAM53B-201ENST00000280780 BCL2L13Q9BXK5 485 aa28.7■■■□□ 2.18
FAM53B-201ENST00000280780 RFC4P35249 363 aa28.69■■■□□ 2.18
FAM53B-201ENST00000280780 HDGFL1Q5TGJ6 251 aa28.69■■■□□ 2.18
FAM53B-201ENST00000280780 GOLGB1Q14789 3259 aaKnown RBP28.68■■■□□ 2.18
FAM53B-201ENST00000280780 NBPF26B4DH59 902 aa28.68■■■□□ 2.18
FAM53B-201ENST00000280780 GYS1P13807 737 aa28.68■■■□□ 2.18
FAM53B-201ENST00000280780 EIF2S2P20042 333 aaKnown RBP28.68■■■□□ 2.18
FAM53B-201ENST00000280780 NBPF10Q6P3W6 841 aaKnown RBP28.68■■■□□ 2.18
FAM53B-201ENST00000280780 NBPF15Q8N660 670 aa28.68■■■□□ 2.18
FAM53B-201ENST00000280780 ZNF428Q96B54 188 aa28.68■■■□□ 2.18
FAM53B-201ENST00000280780 BCAR3O75815 825 aa28.67■■■□□ 2.18
FAM53B-201ENST00000280780 UTRNP46939 3433 aa28.66■■■□□ 2.18
FAM53B-201ENST00000280780 ARXQ96QS3 562 aa28.66■■■□□ 2.18
FAM53B-201ENST00000280780 PPP1R1BQ9UD71 204 aaPredicted RBP28.66■■■□□ 2.18
FAM53B-201ENST00000280780 COL15A1P39059 1388 aa28.65■■■□□ 2.18
FAM53B-201ENST00000280780 ALDH1L2Q3SY69 923 aa28.65■■■□□ 2.18
FAM53B-201ENST00000280780 USP42Q9H9J4 1324 aaKnown RBP28.64■■■□□ 2.18
FAM53B-201ENST00000280780 FKBP8Q14318 412 aa28.63■■■□□ 2.17
FAM53B-201ENST00000280780 CCDC30Q5VVM6 783 aa28.63■■■□□ 2.17
FAM53B-201ENST00000280780 USPL1Q5W0Q7 1092 aa28.63■■■□□ 2.17
FAM53B-201ENST00000280780 MRPL50Q8N5N7 158 aaKnown RBP28.63■■■□□ 2.17
FAM53B-201ENST00000280780 BCL2L12Q9HB09 334 aa28.63■■■□□ 2.17
FAM53B-201ENST00000280780 SMC4Q9NTJ3 1288 aa28.63■■■□□ 2.17
FAM53B-201ENST00000280780 CHPF2Q9P2E5 772 aa28.63■■■□□ 2.17
FAM53B-201ENST00000280780 ZNF330Q9Y3S2 320 aaPredicted RBP28.63■■■□□ 2.17
FAM53B-201ENST00000280780 IL6STP40189 918 aaPredicted RBP28.62■■■□□ 2.17
FAM53B-201ENST00000280780 PDIA6Q15084 440 aa28.62■■■□□ 2.17
FAM53B-201ENST00000280780 PROSER3Q2NL68 480 aa28.62■■■□□ 2.17
FAM53B-201ENST00000280780 ANXA1P04083 346 aa28.62■■■□□ 2.17
FAM53B-201ENST00000280780 POLD1P28340 1107 aa28.62■■■□□ 2.17
FAM53B-201ENST00000280780 TBC1D2BQ9UPU7 963 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms