RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 CCDC12Q8WUD4 166 aaPredicted RBP12.24□□□□□ -0.45
OTOF-201ENST00000272371 NUP133Q8WUM0 1156 aa12.24□□□□□ -0.45
OTOF-201ENST00000272371 KLHL10Q6JEL2 608 aa12.24□□□□□ -0.45
OTOF-201ENST00000272371 CCDC158Q5M9N0 1113 aa12.23□□□□□ -0.45
OTOF-201ENST00000272371 TOM1L2Q6ZVM7 507 aa12.23□□□□□ -0.45
OTOF-201ENST00000272371 OTUD6BQ8N6M0 293 aa12.23□□□□□ -0.45
OTOF-201ENST00000272371 WASF1Q92558 559 aa12.23□□□□□ -0.45
OTOF-201ENST00000272371 CCDC121Q6ZUS5 278 aa12.23□□□□□ -0.45
OTOF-201ENST00000272371 RBM27Q9P2N5 1060 aaKnown RBP12.23□□□□□ -0.45
OTOF-201ENST00000272371 ANAPC15P60006 121 aa12.23□□□□□ -0.45
OTOF-201ENST00000272371 ANKS4BQ8N8V4 417 aa12.23□□□□□ -0.45
OTOF-201ENST00000272371 ZSWIM4Q9H7M6 989 aa12.23□□□□□ -0.45
OTOF-201ENST00000272371 TMCO5BA8MYB1 307 aa12.23□□□□□ -0.45
OTOF-201ENST00000272371 CCT4P50991 539 aaKnown RBP12.23□□□□□ -0.45
OTOF-201ENST00000272371 CPLX3Q8WVH0 158 aa12.23□□□□□ -0.45
OTOF-201ENST00000272371 NAP1L3Q99457 506 aaPredicted RBP12.22□□□□□ -0.45
OTOF-201ENST00000272371 OGFRQ9NZT2 677 aa12.22□□□□□ -0.45
OTOF-201ENST00000272371 PPP2R1AP30153 589 aa12.22□□□□□ -0.45
OTOF-201ENST00000272371 NAA25Q14CX7 972 aa12.22□□□□□ -0.45
OTOF-201ENST00000272371 ATF7IPQ6VMQ6 1270 aa12.22□□□□□ -0.45
OTOF-201ENST00000272371 HECW1Q76N89 1606 aa12.22□□□□□ -0.45
OTOF-201ENST00000272371 MCM6Q14566 821 aa12.22□□□□□ -0.45
OTOF-201ENST00000272371 TMEM132EQ6IEE7 984 aa12.22□□□□□ -0.45
OTOF-201ENST00000272371 ZNF830Q96NB3 372 aaPredicted RBP12.22□□□□□ -0.45
OTOF-201ENST00000272371 KIF21BO75037 1637 aa12.22□□□□□ -0.45
OTOF-201ENST00000272371 GNG11P61952 73 aa12.22□□□□□ -0.45
OTOF-201ENST00000272371 FERMT3Q86UX7 667 aa12.22□□□□□ -0.45
OTOF-201ENST00000272371 RAPGEF4Q8WZA2 1011 aa12.22□□□□□ -0.45
OTOF-201ENST00000272371 DDX19AQ9NUU7 478 aaKnown RBP12.22□□□□□ -0.45
OTOF-201ENST00000272371 NCOA2Q15596 1464 aa12.22□□□□□ -0.45
OTOF-201ENST00000272371 CASKIN1Q8WXD9 1431 aa12.22□□□□□ -0.45
OTOF-201ENST00000272371 SSBP05455 408 aaKnown RBP eCLIP12.22□□□□□ -0.45
OTOF-201ENST00000272371 KIF5BP33176 963 aa12.22□□□□□ -0.45
OTOF-201ENST00000272371 LRSAM1Q6UWE0 723 aa12.22□□□□□ -0.45
OTOF-201ENST00000272371 VPS36Q86VN1 386 aa12.22□□□□□ -0.45
OTOF-201ENST00000272371 SERPINA10Q9UK55 444 aa12.22□□□□□ -0.45
OTOF-201ENST00000272371 POTEJP0CG39 1038 aa12.22□□□□□ -0.45
OTOF-201ENST00000272371 EBAG9O00559 213 aa12.21□□□□□ -0.45
OTOF-201ENST00000272371 SOGA3Q5TF21 947 aa12.21□□□□□ -0.45
OTOF-201ENST00000272371 PRDM11Q9NQV5 511 aa12.21□□□□□ -0.45
OTOF-201ENST00000272371 NEBLO76041 1014 aa12.21□□□□□ -0.45
OTOF-201ENST00000272371 CTNNBL1Q8WYA6 563 aaPredicted RBP12.21□□□□□ -0.45
OTOF-201ENST00000272371 CKAP4Q07065 602 aaKnown RBP12.21□□□□□ -0.45
OTOF-201ENST00000272371 LARP1Q6PKG0 1096 aaKnown RBP12.21□□□□□ -0.45
OTOF-201ENST00000272371 HOOK3Q86VS8 718 aa12.21□□□□□ -0.45
OTOF-201ENST00000272371 VPS18Q9P253 973 aa12.21□□□□□ -0.45
OTOF-201ENST00000272371 OPA1O60313 960 aa12.21□□□□□ -0.46
OTOF-201ENST00000272371 CEBPAP49715 358 aaPredicted RBP12.21□□□□□ -0.46
OTOF-201ENST00000272371 TSR2Q969E8 191 aaKnown RBP12.21□□□□□ -0.46
OTOF-201ENST00000272371 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.21□□□□□ -0.46
OTOF-201ENST00000272371 LRRC9Q6ZRR7 1453 aa12.21□□□□□ -0.46
OTOF-201ENST00000272371 KRBA2Q6ZNG9 492 aa12.21□□□□□ -0.46
OTOF-201ENST00000272371 NBPF11Q86T75 865 aa12.21□□□□□ -0.46
OTOF-201ENST00000272371 TSG101Q99816 390 aa12.21□□□□□ -0.46
OTOF-201ENST00000272371 JADE2Q9NQC1 790 aa12.21□□□□□ -0.46
OTOF-201ENST00000272371 FGD6Q6ZV73 1430 aa12.21□□□□□ -0.46
OTOF-201ENST00000272371 ATRIPQ8WXE1 791 aa12.2□□□□□ -0.46
OTOF-201ENST00000272371 IQGAP2Q13576 1575 aa12.2□□□□□ -0.46
OTOF-201ENST00000272371 DDX46Q7L014 1031 aaKnown RBP12.2□□□□□ -0.46
OTOF-201ENST00000272371 FSD2A1L4K1 749 aa12.2□□□□□ -0.46
OTOF-201ENST00000272371 MTHFSP49914 203 aa12.2□□□□□ -0.46
OTOF-201ENST00000272371 KLHL40Q2TBA0 621 aa12.2□□□□□ -0.46
OTOF-201ENST00000272371 DDX23Q9BUQ8 820 aaKnown RBP12.2□□□□□ -0.46
OTOF-201ENST00000272371 IGSF3O75054 1194 aa12.2□□□□□ -0.46
OTOF-201ENST00000272371 SETSIPP0DME0 302 aa12.2□□□□□ -0.46
OTOF-201ENST00000272371 NACAP1Q9BZK3 213 aa12.2□□□□□ -0.46
OTOF-201ENST00000272371 BAG4O95429 457 aaKnown RBP12.2□□□□□ -0.46
OTOF-201ENST00000272371 FAM114A1Q8IWE2 563 aa12.19□□□□□ -0.46
OTOF-201ENST00000272371 PPP1R12BO60237 982 aaPredicted RBP12.19□□□□□ -0.46
OTOF-201ENST00000272371 XRCC6P12956 609 aaKnown RBP eCLIP12.19□□□□□ -0.46
OTOF-201ENST00000272371 MATR3P43243 847 aaKnown RBP eCLIP12.19□□□□□ -0.46
OTOF-201ENST00000272371 CCDC155Q8N6L0 562 aa12.19□□□□□ -0.46
OTOF-201ENST00000272371 CLEC11AQ9Y240 323 aa12.19□□□□□ -0.46
OTOF-201ENST00000272371 FYCO1Q9BQS8 1478 aa12.19□□□□□ -0.46
OTOF-201ENST00000272371 TDRD12Q587J7 1177 aaKnown RBP12.19□□□□□ -0.46
OTOF-201ENST00000272371 A0A1B0GUA9 196 aa12.19□□□□□ -0.46
OTOF-201ENST00000272371 FGFR1OPO95684 399 aaKnown RBP12.19□□□□□ -0.46
OTOF-201ENST00000272371 FEZ1Q99689 392 aa12.19□□□□□ -0.46
OTOF-201ENST00000272371 KIF4AO95239 1232 aa12.19□□□□□ -0.46
OTOF-201ENST00000272371 PAIP2Q9BPZ3 127 aaKnown RBP12.19□□□□□ -0.46
OTOF-201ENST00000272371 VGLL3A8MV65 326 aa12.18□□□□□ -0.46
OTOF-201ENST00000272371 SLU7O95391 586 aaKnown RBP12.18□□□□□ -0.46
OTOF-201ENST00000272371 ZKSCAN5Q9Y2L8 839 aa12.18□□□□□ -0.46
OTOF-201ENST00000272371 RRBP1Q9P2E9 1410 aaKnown RBP12.18□□□□□ -0.46
OTOF-201ENST00000272371 C11orf95C9JLR9 678 aaPredicted RBP12.18□□□□□ -0.46
OTOF-201ENST00000272371 WDR63Q8IWG1 891 aa12.18□□□□□ -0.46
OTOF-201ENST00000272371 SH2B1Q9NRF2 756 aaPredicted RBP12.18□□□□□ -0.46
OTOF-201ENST00000272371 EHBP1Q8NDI1 1231 aa12.18□□□□□ -0.46
OTOF-201ENST00000272371 CCDC114Q96M63 670 aa12.18□□□□□ -0.46
OTOF-201ENST00000272371 CD109Q6YHK3 1445 aa12.18□□□□□ -0.46
OTOF-201ENST00000272371 CUL7Q14999 1698 aa12.18□□□□□ -0.46
OTOF-201ENST00000272371 ERICH3Q5RHP9 1530 aa12.18□□□□□ -0.46
OTOF-201ENST00000272371 A0A1W2PRG0 241 aa12.18□□□□□ -0.46
OTOF-201ENST00000272371 MXRA7P84157 204 aa12.18□□□□□ -0.46
OTOF-201ENST00000272371 GOLGA1Q92805 767 aa12.18□□□□□ -0.46
OTOF-201ENST00000272371 HOMER2Q9NSB8 354 aa12.18□□□□□ -0.46
OTOF-201ENST00000272371 CTNNA3Q9UI47 895 aa12.18□□□□□ -0.46
OTOF-201ENST00000272371 KIF20AO95235 890 aa12.18□□□□□ -0.46
OTOF-201ENST00000272371 GPR162Q16538 588 aa12.18□□□□□ -0.46
OTOF-201ENST00000272371 CCDC97Q96F63 343 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms