RNA–Protein interactions for RNA: ENST00000272238.8

ATP6V1C2-201, Transcript of ATPase H+ transporting V1 subunit C2, humanhuman

TSL 5 BASIC

Gene ATP6V1C2, Length 1,565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2-201ENST00000272238 SLC15A2Q16348 729 aa20.21■□□□□ 0.83
ATP6V1C2-201ENST00000272238 SMIM5Q71RC9 77 aa20.21■□□□□ 0.83
ATP6V1C2-201ENST00000272238 ELL2O00472 640 aaPredicted RBP20.2■□□□□ 0.82
ATP6V1C2-201ENST00000272238 PIP4K2AP48426 406 aaPredicted RBP20.2■□□□□ 0.82
ATP6V1C2-201ENST00000272238 GOLGA2Q08379 1002 aa20.2■□□□□ 0.82
ATP6V1C2-201ENST00000272238 AKT1S1Q96B36 256 aa20.2■□□□□ 0.82
ATP6V1C2-201ENST00000272238 USP16Q9Y5T5 823 aa20.2■□□□□ 0.82
ATP6V1C2-201ENST00000272238 CNTNAP4Q9C0A0 1308 aa20.19■□□□□ 0.82
ATP6V1C2-201ENST00000272238 GIGYF1O75420 1035 aaPredicted RBP20.19■□□□□ 0.82
ATP6V1C2-201ENST00000272238 STARD3NLO95772 234 aa20.19■□□□□ 0.82
ATP6V1C2-201ENST00000272238 CYP19A1P11511 503 aaPredicted RBP20.19■□□□□ 0.82
ATP6V1C2-201ENST00000272238 NECTIN2Q92692 538 aa20.19■□□□□ 0.82
ATP6V1C2-201ENST00000272238 CDCA7LQ96GN5 454 aa20.19■□□□□ 0.82
ATP6V1C2-201ENST00000272238 ZBTB1Q9Y2K1 713 aa20.19■□□□□ 0.82
ATP6V1C2-201ENST00000272238 ZNF330Q9Y3S2 320 aaPredicted RBP20.19■□□□□ 0.82
ATP6V1C2-201ENST00000272238 CASZ1Q86V15 1759 aa20.18■□□□□ 0.82
ATP6V1C2-201ENST00000272238 EIF2S2P20042 333 aaKnown RBP20.18■□□□□ 0.82
ATP6V1C2-201ENST00000272238 AMIGO3Q86WK7 504 aa20.18■□□□□ 0.82
ATP6V1C2-201ENST00000272238 CCDC87Q9NVE4 849 aa20.18■□□□□ 0.82
ATP6V1C2-201ENST00000272238 CANXP27824 592 aaKnown RBP20.17■□□□□ 0.82
ATP6V1C2-201ENST00000272238 MYH16Q9H6N6 1097 aa20.17■□□□□ 0.82
ATP6V1C2-201ENST00000272238 MSH5O43196 834 aa20.17■□□□□ 0.82
ATP6V1C2-201ENST00000272238 TEX13AQ9BXU3 409 aaPredicted RBP20.17■□□□□ 0.82
ATP6V1C2-201ENST00000272238 ZBED9Q6R2W3 1325 aa20.16■□□□□ 0.82
ATP6V1C2-201ENST00000272238 A1BGP04217 495 aa20.16■□□□□ 0.82
ATP6V1C2-201ENST00000272238 DUSP27Q5VZP5 1158 aa20.16■□□□□ 0.82
ATP6V1C2-201ENST00000272238 C8orf58Q8NAV2 365 aa20.16■□□□□ 0.82
ATP6V1C2-201ENST00000272238 PNPLA7Q6ZV29 1317 aa20.15■□□□□ 0.82
ATP6V1C2-201ENST00000272238 E9PSI1 815 aa20.15■□□□□ 0.82
ATP6V1C2-201ENST00000272238 INTS5Q6P9B9 1019 aaKnown RBP20.15■□□□□ 0.82
ATP6V1C2-201ENST00000272238 PDGFDQ9GZP0 370 aaPredicted RBP20.15■□□□□ 0.82
ATP6V1C2-201ENST00000272238 EXOSC9Q06265 439 aaKnown RBP20.14■□□□□ 0.81
ATP6V1C2-201ENST00000272238 TSPYL6Q8N831 410 aa20.14■□□□□ 0.81
ATP6V1C2-201ENST00000272238 RTCBQ9Y3I0 505 aaKnown RBP20.14■□□□□ 0.81
ATP6V1C2-201ENST00000272238 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.13■□□□□ 0.81
ATP6V1C2-201ENST00000272238 HMGB2P26583 209 aaKnown RBP20.13■□□□□ 0.81
ATP6V1C2-201ENST00000272238 HDGFL1Q5TGJ6 251 aa20.13■□□□□ 0.81
ATP6V1C2-201ENST00000272238 COL15A1P39059 1388 aa20.13■□□□□ 0.81
ATP6V1C2-201ENST00000272238 SLFN5Q08AF3 891 aa20.12■□□□□ 0.81
ATP6V1C2-201ENST00000272238 RC3H1Q5TC82 1133 aaKnown RBP20.12■□□□□ 0.81
ATP6V1C2-201ENST00000272238 SCN7AQ01118 1682 aa20.12■□□□□ 0.81
ATP6V1C2-201ENST00000272238 MYL6BP14649 208 aa20.12■□□□□ 0.81
ATP6V1C2-201ENST00000272238 TWISTNBQ3B726 338 aaPredicted RBP20.12■□□□□ 0.81
ATP6V1C2-201ENST00000272238 SOS1Q07889 1333 aaPredicted RBP20.11■□□□□ 0.81
ATP6V1C2-201ENST00000272238 ANXA1P04083 346 aa20.11■□□□□ 0.81
ATP6V1C2-201ENST00000272238 SSFA2P28290 1259 aa20.11■□□□□ 0.81
ATP6V1C2-201ENST00000272238 ARXQ96QS3 562 aa20.11■□□□□ 0.81
ATP6V1C2-201ENST00000272238 BCORQ6W2J9 1755 aa20.1■□□□□ 0.81
ATP6V1C2-201ENST00000272238 RPS6KA4O75676 772 aa20.1■□□□□ 0.81
ATP6V1C2-201ENST00000272238 COL23A1Q86Y22 540 aaPredicted RBP20.1■□□□□ 0.81
ATP6V1C2-201ENST00000272238 NBPF26B4DH59 902 aa20.09■□□□□ 0.81
ATP6V1C2-201ENST00000272238 TCERG1O14776 1098 aaKnown RBP20.09■□□□□ 0.81
ATP6V1C2-201ENST00000272238 HOXB7P09629 217 aa20.09■□□□□ 0.81
ATP6V1C2-201ENST00000272238 NBPF10Q6P3W6 841 aaKnown RBP20.09■□□□□ 0.81
ATP6V1C2-201ENST00000272238 NPM2Q86SE8 214 aaKnown RBP20.09■□□□□ 0.81
ATP6V1C2-201ENST00000272238 NBPF15Q8N660 670 aa20.09■□□□□ 0.81
ATP6V1C2-201ENST00000272238 CHPF2Q9P2E5 772 aa20.09■□□□□ 0.81
ATP6V1C2-201ENST00000272238 PROSER3Q2NL68 480 aa20.08■□□□□ 0.81
ATP6V1C2-201ENST00000272238 TRAPPC3LQ5T215 181 aa20.08■□□□□ 0.81
ATP6V1C2-201ENST00000272238 ZBTB7AO95365 584 aa20.07■□□□□ 0.8
ATP6V1C2-201ENST00000272238 RFC4P35249 363 aa20.07■□□□□ 0.8
ATP6V1C2-201ENST00000272238 IL6STP40189 918 aaPredicted RBP20.07■□□□□ 0.8
ATP6V1C2-201ENST00000272238 MSL1Q68DK7 614 aa20.07■□□□□ 0.8
ATP6V1C2-201ENST00000272238 ARHGEF1Q92888 912 aaKnown RBP20.07■□□□□ 0.8
ATP6V1C2-201ENST00000272238 FLAD1Q8NFF5 587 aa20.06■□□□□ 0.8
ATP6V1C2-201ENST00000272238 SRP68Q9UHB9 627 aaKnown RBP20.06■□□□□ 0.8
ATP6V1C2-201ENST00000272238 ADRA2BP18089 450 aa20.05■□□□□ 0.8
ATP6V1C2-201ENST00000272238 EIF5P55010 431 aaKnown RBP20.05■□□□□ 0.8
ATP6V1C2-201ENST00000272238 ERBB4Q15303 1308 aa20.05■□□□□ 0.8
ATP6V1C2-201ENST00000272238 TBC1D2BQ9UPU7 963 aa20.04■□□□□ 0.8
ATP6V1C2-201ENST00000272238 CCDC30Q5VVM6 783 aa20.04■□□□□ 0.8
ATP6V1C2-201ENST00000272238 USP42Q9H9J4 1324 aaKnown RBP20.04■□□□□ 0.8
ATP6V1C2-201ENST00000272238 AIMP1Q12904 312 aaKnown RBP20.03■□□□□ 0.8
ATP6V1C2-201ENST00000272238 PDIA6Q15084 440 aa20.03■□□□□ 0.8
ATP6V1C2-201ENST00000272238 USPL1Q5W0Q7 1092 aa20.03■□□□□ 0.8
ATP6V1C2-201ENST00000272238 DZIP3Q86Y13 1208 aaKnown RBP20.03■□□□□ 0.8
ATP6V1C2-201ENST00000272238 TRMT2AQ8IZ69 625 aaKnown RBP20.03■□□□□ 0.8
ATP6V1C2-201ENST00000272238 STK31Q9BXU1 1019 aa20.03■□□□□ 0.8
ATP6V1C2-201ENST00000272238 DBF4Q9UBU7 674 aaPredicted RBP20.03■□□□□ 0.8
ATP6V1C2-201ENST00000272238 ARFGEF2Q9Y6D5 1785 aa20.02■□□□□ 0.8
ATP6V1C2-201ENST00000272238 ZPR1O75312 459 aa20.02■□□□□ 0.8
ATP6V1C2-201ENST00000272238 VAMP4O75379 141 aa20.02■□□□□ 0.8
ATP6V1C2-201ENST00000272238 DDX21Q9NR30 783 aaKnown RBP eCLIP20.02■□□□□ 0.8
ATP6V1C2-201ENST00000272238 ATF5Q9Y2D1 282 aaPredicted RBP20.02■□□□□ 0.8
ATP6V1C2-201ENST00000272238 A0A087WZG4 1122 aa20.01■□□□□ 0.79
ATP6V1C2-201ENST00000272238 NUP98P52948 1817 aa20■□□□□ 0.79
ATP6V1C2-201ENST00000272238 KIF6Q6ZMV9 814 aa20■□□□□ 0.79
ATP6V1C2-201ENST00000272238 TTLL7Q6ZT98 887 aa20■□□□□ 0.79
ATP6V1C2-201ENST00000272238 ANKRD36CQ5JPF3 1778 aa20■□□□□ 0.79
ATP6V1C2-201ENST00000272238 XAGE3Q8WTP9 111 aa20■□□□□ 0.79
ATP6V1C2-201ENST00000272238 BCL2L13Q9BXK5 485 aa20■□□□□ 0.79
ATP6V1C2-201ENST00000272238 ZBTB3Q9H5J0 574 aa20■□□□□ 0.79
ATP6V1C2-201ENST00000272238 PHAXQ9H814 394 aaKnown RBP20■□□□□ 0.79
ATP6V1C2-201ENST00000272238 NARFQ9UHQ1 456 aa20■□□□□ 0.79
ATP6V1C2-201ENST00000272238 CACNA1FO60840 1977 aa19.99■□□□□ 0.79
ATP6V1C2-201ENST00000272238 GYS1P13807 737 aa19.99■□□□□ 0.79
ATP6V1C2-201ENST00000272238 LRP10Q7Z4F1 713 aa19.99■□□□□ 0.79
ATP6V1C2-201ENST00000272238 MTFR1LQ9H019 292 aa19.99■□□□□ 0.79
ATP6V1C2-201ENST00000272238 COL24A1Q17RW2 1714 aa19.98■□□□□ 0.79
ATP6V1C2-201ENST00000272238 COPS6Q7L5N1 327 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms