RNA–Protein interactions for RNA: ENST00000262942.9

ARPC1A-201, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARPC1A, Length 1,565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-201ENST00000262942 LINC00116Q8NCU8 138 aa18.3■□□□□ 0.52
ARPC1A-201ENST00000262942 USP16Q9Y5T5 823 aa18.3■□□□□ 0.52
ARPC1A-201ENST00000262942 N4BP2Q86UW6 1770 aaPredicted RBP18.29■□□□□ 0.52
ARPC1A-201ENST00000262942 SCN7AQ01118 1682 aa18.29■□□□□ 0.52
ARPC1A-201ENST00000262942 ANKRD36CQ5JPF3 1778 aa18.29■□□□□ 0.52
ARPC1A-201ENST00000262942 SNRPA1P09661 255 aaKnown RBP18.29■□□□□ 0.52
ARPC1A-201ENST00000262942 BAG6P46379 1132 aa18.29■□□□□ 0.52
ARPC1A-201ENST00000262942 SF3B2Q13435 895 aaKnown RBP18.29■□□□□ 0.52
ARPC1A-201ENST00000262942 TWISTNBQ3B726 338 aaPredicted RBP18.29■□□□□ 0.52
ARPC1A-201ENST00000262942 VAMP4O75379 141 aa18.28■□□□□ 0.52
ARPC1A-201ENST00000262942 HOXB7P09629 217 aa18.28■□□□□ 0.52
ARPC1A-201ENST00000262942 CYP19A1P11511 503 aaPredicted RBP18.26■□□□□ 0.51
ARPC1A-201ENST00000262942 SLC27A3Q5K4L6 730 aa18.26■□□□□ 0.51
ARPC1A-201ENST00000262942 SOS1Q07889 1333 aaPredicted RBP18.25■□□□□ 0.51
ARPC1A-201ENST00000262942 AFDNP55196 1824 aaKnown RBP18.25■□□□□ 0.51
ARPC1A-201ENST00000262942 NECTIN2Q92692 538 aa18.25■□□□□ 0.51
ARPC1A-201ENST00000262942 CASZ1Q86V15 1759 aa18.24■□□□□ 0.51
ARPC1A-201ENST00000262942 EIF2S2P20042 333 aaKnown RBP18.24■□□□□ 0.51
ARPC1A-201ENST00000262942 HDGFL1Q5TGJ6 251 aa18.24■□□□□ 0.51
ARPC1A-201ENST00000262942 CNTNAP4Q9C0A0 1308 aa18.24■□□□□ 0.51
ARPC1A-201ENST00000262942 CRKLP46109 303 aaKnown RBP18.23■□□□□ 0.51
ARPC1A-201ENST00000262942 PIP4K2AP48426 406 aaPredicted RBP18.23■□□□□ 0.51
ARPC1A-201ENST00000262942 TEX13AQ9BXU3 409 aaPredicted RBP18.23■□□□□ 0.51
ARPC1A-201ENST00000262942 ZBTB1Q9Y2K1 713 aa18.23■□□□□ 0.51
ARPC1A-201ENST00000262942 NBPF26B4DH59 902 aa18.22■□□□□ 0.51
ARPC1A-201ENST00000262942 A1BGP04217 495 aa18.22■□□□□ 0.51
ARPC1A-201ENST00000262942 PDIA6Q15084 440 aa18.22■□□□□ 0.51
ARPC1A-201ENST00000262942 PROSER3Q2NL68 480 aa18.22■□□□□ 0.51
ARPC1A-201ENST00000262942 NBPF14Q5TI25 921 aa18.22■□□□□ 0.51
ARPC1A-201ENST00000262942 NBPF10Q6P3W6 841 aaKnown RBP18.22■□□□□ 0.51
ARPC1A-201ENST00000262942 INTS5Q6P9B9 1019 aaKnown RBP18.22■□□□□ 0.51
ARPC1A-201ENST00000262942 NBPF15Q8N660 670 aa18.22■□□□□ 0.51
ARPC1A-201ENST00000262942 TCERG1O14776 1098 aaKnown RBP18.21■□□□□ 0.51
ARPC1A-201ENST00000262942 ANXA1P04083 346 aa18.21■□□□□ 0.51
ARPC1A-201ENST00000262942 ZNF827Q17R98 1081 aa18.21■□□□□ 0.51
ARPC1A-201ENST00000262942 ANO8Q9HCE9 1232 aaPredicted RBP18.21■□□□□ 0.51
ARPC1A-201ENST00000262942 CHPF2Q9P2E5 772 aa18.21■□□□□ 0.51
ARPC1A-201ENST00000262942 CT47B1P0C2W7 299 aaPredicted RBP18.21■□□□□ 0.51
ARPC1A-201ENST00000262942 LRP10Q7Z4F1 713 aa18.21■□□□□ 0.51
ARPC1A-201ENST00000262942 AMIGO3Q86WK7 504 aa18.21■□□□□ 0.51
ARPC1A-201ENST00000262942 CCDC87Q9NVE4 849 aa18.21■□□□□ 0.51
ARPC1A-201ENST00000262942 STARD3NLO95772 234 aa18.2■□□□□ 0.5
ARPC1A-201ENST00000262942 AKT1S1Q96B36 256 aa18.2■□□□□ 0.5
ARPC1A-201ENST00000262942 ERBB4Q15303 1308 aa18.2■□□□□ 0.5
ARPC1A-201ENST00000262942 COL24A1Q17RW2 1714 aa18.2■□□□□ 0.5
ARPC1A-201ENST00000262942 RC3H1Q5TC82 1133 aaKnown RBP18.19■□□□□ 0.5
ARPC1A-201ENST00000262942 SSH1Q8WYL5 1049 aa18.19■□□□□ 0.5
ARPC1A-201ENST00000262942 RARSP54136 660 aaKnown RBP18.18■□□□□ 0.5
ARPC1A-201ENST00000262942 CCDC30Q5VVM6 783 aa18.18■□□□□ 0.5
ARPC1A-201ENST00000262942 SMIM5Q71RC9 77 aa18.18■□□□□ 0.5
ARPC1A-201ENST00000262942 CANXP27824 592 aaKnown RBP18.17■□□□□ 0.5
ARPC1A-201ENST00000262942 BCL2L13Q9BXK5 485 aa18.17■□□□□ 0.5
ARPC1A-201ENST00000262942 DDX21Q9NR30 783 aaKnown RBP eCLIP18.17■□□□□ 0.5
ARPC1A-201ENST00000262942 COL15A1P39059 1388 aa18.17■□□□□ 0.5
ARPC1A-201ENST00000262942 GNPATO15228 680 aa18.17■□□□□ 0.5
ARPC1A-201ENST00000262942 MYL6BP14649 208 aa18.17■□□□□ 0.5
ARPC1A-201ENST00000262942 MRPL50Q8N5N7 158 aaKnown RBP18.17■□□□□ 0.5
ARPC1A-201ENST00000262942 ZNF428Q96B54 188 aa18.17■□□□□ 0.5
ARPC1A-201ENST00000262942 ALDH1L2Q3SY69 923 aa18.16■□□□□ 0.5
ARPC1A-201ENST00000262942 G2E3Q7L622 706 aa18.16■□□□□ 0.5
ARPC1A-201ENST00000262942 AK7Q96M32 723 aa18.16■□□□□ 0.5
ARPC1A-201ENST00000262942 PHAXQ9H814 394 aaKnown RBP18.16■□□□□ 0.5
ARPC1A-201ENST00000262942 DBF4Q9UBU7 674 aaPredicted RBP18.16■□□□□ 0.5
ARPC1A-201ENST00000262942 RPS6KA4O75676 772 aa18.15■□□□□ 0.5
ARPC1A-201ENST00000262942 EIF5P55010 431 aaKnown RBP18.15■□□□□ 0.5
ARPC1A-201ENST00000262942 BCAR3O75815 825 aa18.14■□□□□ 0.49
ARPC1A-201ENST00000262942 IL6STP40189 918 aaPredicted RBP18.14■□□□□ 0.49
ARPC1A-201ENST00000262942 SLC4A2P04920 1241 aa18.13■□□□□ 0.49
ARPC1A-201ENST00000262942 STK31Q9BXU1 1019 aa18.13■□□□□ 0.49
ARPC1A-201ENST00000262942 SMC4Q9NTJ3 1288 aa18.13■□□□□ 0.49
ARPC1A-201ENST00000262942 PNPLA7Q6ZV29 1317 aa18.13■□□□□ 0.49
ARPC1A-201ENST00000262942 SLC15A2Q16348 729 aa18.13■□□□□ 0.49
ARPC1A-201ENST00000262942 RCAN3Q9UKA8 241 aa18.13■□□□□ 0.49
ARPC1A-201ENST00000262942 TTLL7Q6ZT98 887 aa18.12■□□□□ 0.49
ARPC1A-201ENST00000262942 XAGE3Q8WTP9 111 aa18.12■□□□□ 0.49
ARPC1A-201ENST00000262942 HYPKQ9NX55 129 aa18.12■□□□□ 0.49
ARPC1A-201ENST00000262942 RTCBQ9Y3I0 505 aaKnown RBP18.12■□□□□ 0.49
ARPC1A-201ENST00000262942 ZNF330Q9Y3S2 320 aaPredicted RBP18.12■□□□□ 0.49
ARPC1A-201ENST00000262942 PHF14O94880 888 aa18.11■□□□□ 0.49
ARPC1A-201ENST00000262942 BRPF1P55201 1214 aaPredicted RBP18.11■□□□□ 0.49
ARPC1A-201ENST00000262942 CHMP4AQ9BY43 222 aa18.11■□□□□ 0.49
ARPC1A-201ENST00000262942 STK32BQ9NY57 414 aa18.11■□□□□ 0.49
ARPC1A-201ENST00000262942 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.1■□□□□ 0.49
ARPC1A-201ENST00000262942 SOCS7O14512 581 aa18.1■□□□□ 0.49
ARPC1A-201ENST00000262942 SSFA2P28290 1259 aa18.1■□□□□ 0.49
ARPC1A-201ENST00000262942 FLIIQ13045 1269 aa18.1■□□□□ 0.49
ARPC1A-201ENST00000262942 COPS6Q7L5N1 327 aa18.1■□□□□ 0.49
ARPC1A-201ENST00000262942 ADCY9O60503 1353 aa18.1■□□□□ 0.49
ARPC1A-201ENST00000262942 LAMB2P55268 1798 aa18.1■□□□□ 0.49
ARPC1A-201ENST00000262942 ARHGEF1Q92888 912 aaKnown RBP18.09■□□□□ 0.49
ARPC1A-201ENST00000262942 TFCP2L1Q9NZI6 479 aa18.09■□□□□ 0.49
ARPC1A-201ENST00000262942 NRXN2Q9P2S2 1712 aa18.09■□□□□ 0.49
ARPC1A-201ENST00000262942 HMGB2P26583 209 aaKnown RBP18.08■□□□□ 0.49
ARPC1A-201ENST00000262942 AIMP1Q12904 312 aaKnown RBP18.08■□□□□ 0.49
ARPC1A-201ENST00000262942 MYH3P11055 1940 aa18.08■□□□□ 0.48
ARPC1A-201ENST00000262942 COL23A1Q86Y22 540 aaPredicted RBP18.08■□□□□ 0.48
ARPC1A-201ENST00000262942 SRP68Q9UHB9 627 aaKnown RBP18.08■□□□□ 0.48
ARPC1A-201ENST00000262942 TBC1D2BQ9UPU7 963 aa18.08■□□□□ 0.48
ARPC1A-201ENST00000262942 TNNQ9UQP3 1299 aa18.08■□□□□ 0.48
ARPC1A-201ENST00000262942 DDX60Q8IY21 1712 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms