RNA–Protein interactions for RNA: ENST00000259607.6

CCL21-201, Transcript of C-C motif chemokine ligand 21, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCL21, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21-201ENST00000259607 PTGER2P43116 358 aa13.45□□□□□ -0.26
CCL21-201ENST00000259607 NEUROD2Q15784 382 aa13.45□□□□□ -0.26
CCL21-201ENST00000259607 TSPYL4Q9UJ04 414 aa13.45□□□□□ -0.26
CCL21-201ENST00000259607 TUBGCP6Q96RT7 1819 aa13.44□□□□□ -0.26
CCL21-201ENST00000259607 INTS5Q6P9B9 1019 aaKnown RBP13.44□□□□□ -0.26
CCL21-201ENST00000259607 ARHGEF1Q92888 912 aaKnown RBP13.44□□□□□ -0.26
CCL21-201ENST00000259607 RNF39Q9H2S5 420 aa13.44□□□□□ -0.26
CCL21-201ENST00000259607 DLG5Q8TDM6 1919 aa13.44□□□□□ -0.26
CCL21-201ENST00000259607 TJP1Q07157 1748 aa13.44□□□□□ -0.26
CCL21-201ENST00000259607 IL6STP40189 918 aaPredicted RBP13.43□□□□□ -0.26
CCL21-201ENST00000259607 SGIP1Q9BQI5 828 aa13.43□□□□□ -0.26
CCL21-201ENST00000259607 SOS1Q07889 1333 aaPredicted RBP13.42□□□□□ -0.26
CCL21-201ENST00000259607 APAF1O14727 1248 aa13.42□□□□□ -0.26
CCL21-201ENST00000259607 RRP7AQ9Y3A4 280 aaKnown RBP13.42□□□□□ -0.26
CCL21-201ENST00000259607 COL15A1P39059 1388 aa13.42□□□□□ -0.26
CCL21-201ENST00000259607 RGL2O15211 777 aa13.41□□□□□ -0.26
CCL21-201ENST00000259607 CANXP27824 592 aaKnown RBP13.41□□□□□ -0.26
CCL21-201ENST00000259607 GNAI1P63096 354 aa13.41□□□□□ -0.26
CCL21-201ENST00000259607 CCDC27Q2M243 656 aa13.41□□□□□ -0.26
CCL21-201ENST00000259607 CFAP44Q96MT7 982 aa13.41□□□□□ -0.26
CCL21-201ENST00000259607 NARFQ9UHQ1 456 aa13.41□□□□□ -0.26
CCL21-201ENST00000259607 COL24A1Q17RW2 1714 aa13.41□□□□□ -0.26
CCL21-201ENST00000259607 ERBB4Q15303 1308 aa13.4□□□□□ -0.26
CCL21-201ENST00000259607 USP42Q9H9J4 1324 aaKnown RBP13.4□□□□□ -0.26
CCL21-201ENST00000259607 CCER2I3L3R5 266 aa13.4□□□□□ -0.26
CCL21-201ENST00000259607 EIF5P55010 431 aaKnown RBP13.4□□□□□ -0.26
CCL21-201ENST00000259607 EIF4A1P60842 406 aaKnown RBP13.4□□□□□ -0.26
CCL21-201ENST00000259607 MSL1Q68DK7 614 aa13.4□□□□□ -0.26
CCL21-201ENST00000259607 THUMPD2Q9BTF0 503 aaKnown RBP13.4□□□□□ -0.26
CCL21-201ENST00000259607 TRIM35Q9UPQ4 493 aa13.4□□□□□ -0.26
CCL21-201ENST00000259607 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.26
CCL21-201ENST00000259607 ZBTB1Q9Y2K1 713 aa13.4□□□□□ -0.26
CCL21-201ENST00000259607 CD2APQ9Y5K6 639 aa13.4□□□□□ -0.26
CCL21-201ENST00000259607 PARP3Q9Y6F1 533 aa13.4□□□□□ -0.26
CCL21-201ENST00000259607 CHL1O00533 1208 aa13.39□□□□□ -0.27
CCL21-201ENST00000259607 KCNQ3O43525 872 aa13.39□□□□□ -0.27
CCL21-201ENST00000259607 GIGYF1O75420 1035 aaPredicted RBP13.39□□□□□ -0.27
CCL21-201ENST00000259607 HOXB7P09629 217 aa13.39□□□□□ -0.27
CCL21-201ENST00000259607 GYS1P13807 737 aa13.39□□□□□ -0.27
CCL21-201ENST00000259607 FHDC1Q9C0D6 1143 aaPredicted RBP13.39□□□□□ -0.27
CCL21-201ENST00000259607 IFT57Q9NWB7 429 aa13.39□□□□□ -0.27
CCL21-201ENST00000259607 MIS18AQ9NYP9 233 aa13.39□□□□□ -0.27
CCL21-201ENST00000259607 LAS1LQ9Y4W2 734 aaKnown RBP13.39□□□□□ -0.27
CCL21-201ENST00000259607 KDM3BQ7LBC6 1761 aa13.38□□□□□ -0.27
CCL21-201ENST00000259607 MMP10P09238 476 aa13.38□□□□□ -0.27
CCL21-201ENST00000259607 AMIGO3Q86WK7 504 aa13.38□□□□□ -0.27
CCL21-201ENST00000259607 KLHL34Q8N239 644 aa13.38□□□□□ -0.27
CCL21-201ENST00000259607 SYT17Q9BSW7 474 aa13.38□□□□□ -0.27
CCL21-201ENST00000259607 ZNF330Q9Y3S2 320 aaPredicted RBP13.38□□□□□ -0.27
CCL21-201ENST00000259607 CCDC184Q52MB2 194 aa13.37□□□□□ -0.27
CCL21-201ENST00000259607 FAM9BQ8IZU0 186 aa13.37□□□□□ -0.27
CCL21-201ENST00000259607 USP16Q9Y5T5 823 aa13.37□□□□□ -0.27
CCL21-201ENST00000259607 MYH14Q7Z406 1995 aaKnown RBP13.37□□□□□ -0.27
CCL21-201ENST00000259607 IL16Q14005 1332 aa13.37□□□□□ -0.27
CCL21-201ENST00000259607 A1BGP04217 495 aa13.36□□□□□ -0.27
CCL21-201ENST00000259607 USPL1Q5W0Q7 1092 aa13.36□□□□□ -0.27
CCL21-201ENST00000259607 CLEC4GQ6UXB4 293 aa13.36□□□□□ -0.27
CCL21-201ENST00000259607 DZIP3Q86Y13 1208 aaKnown RBP13.36□□□□□ -0.27
CCL21-201ENST00000259607 DIEXFQ68CQ4 756 aaKnown RBP13.35□□□□□ -0.27
CCL21-201ENST00000259607 KIF6Q6ZMV9 814 aa13.35□□□□□ -0.27
CCL21-201ENST00000259607 LAMB4A4D0S4 1761 aa13.35□□□□□ -0.27
CCL21-201ENST00000259607 C4AP0C0L4 1744 aa13.34□□□□□ -0.27
CCL21-201ENST00000259607 TGFB2P61812 414 aa13.34□□□□□ -0.27
CCL21-201ENST00000259607 SMIM5Q71RC9 77 aa13.34□□□□□ -0.27
CCL21-201ENST00000259607 WDR63Q8IWG1 891 aa13.34□□□□□ -0.27
CCL21-201ENST00000259607 SRP68Q9UHB9 627 aaKnown RBP13.34□□□□□ -0.27
CCL21-201ENST00000259607 PDZRN3Q9UPQ7 1066 aa13.34□□□□□ -0.27
CCL21-201ENST00000259607 NPHP1O15259 732 aa13.33□□□□□ -0.28
CCL21-201ENST00000259607 ZNF853P0CG23 659 aa13.33□□□□□ -0.28
CCL21-201ENST00000259607 FKBP8Q14318 412 aa13.33□□□□□ -0.28
CCL21-201ENST00000259607 WWC1Q8IX03 1113 aa13.33□□□□□ -0.28
CCL21-201ENST00000259607 SETDB2Q96T68 719 aa13.33□□□□□ -0.28
CCL21-201ENST00000259607 ERVV-1B6SEH8 477 aa13.32□□□□□ -0.28
CCL21-201ENST00000259607 GRIN3BO60391 1043 aa13.32□□□□□ -0.28
CCL21-201ENST00000259607 TM4SF1P30408 202 aa13.32□□□□□ -0.28
CCL21-201ENST00000259607 MBIPQ9NS73 344 aa13.32□□□□□ -0.28
CCL21-201ENST00000259607 TBC1D2BQ9UPU7 963 aa13.32□□□□□ -0.28
CCL21-201ENST00000259607 CARMIL3Q8ND23 1372 aa13.32□□□□□ -0.28
CCL21-201ENST00000259607 PRAMEF22A3QJZ6 481 aa13.31□□□□□ -0.28
CCL21-201ENST00000259607 EIF2S2P20042 333 aaKnown RBP13.31□□□□□ -0.28
CCL21-201ENST00000259607 GPR162Q16538 588 aa13.31□□□□□ -0.28
CCL21-201ENST00000259607 HDGFL1Q5TGJ6 251 aa13.31□□□□□ -0.28
CCL21-201ENST00000259607 MYH16Q9H6N6 1097 aa13.31□□□□□ -0.28
CCL21-201ENST00000259607 DBF4Q9UBU7 674 aaPredicted RBP13.31□□□□□ -0.28
CCL21-201ENST00000259607 NBPF26B4DH59 902 aa13.3□□□□□ -0.28
CCL21-201ENST00000259607 POLRMTO00411 1230 aaKnown RBP13.3□□□□□ -0.28
CCL21-201ENST00000259607 CAMTA2O94983 1202 aa13.3□□□□□ -0.28
CCL21-201ENST00000259607 MYL6BP14649 208 aa13.3□□□□□ -0.28
CCL21-201ENST00000259607 NFIXQ14938 502 aa13.3□□□□□ -0.28
CCL21-201ENST00000259607 HSP90AB3PQ58FF7 597 aa13.3□□□□□ -0.28
CCL21-201ENST00000259607 NBPF10Q6P3W6 841 aaKnown RBP13.3□□□□□ -0.28
CCL21-201ENST00000259607 NBPF15Q8N660 670 aa13.3□□□□□ -0.28
CCL21-201ENST00000259607 DDX21Q9NR30 783 aaKnown RBP eCLIP13.3□□□□□ -0.28
CCL21-201ENST00000259607 HYPKQ9NX55 129 aa13.3□□□□□ -0.28
CCL21-201ENST00000259607 SCN7AQ01118 1682 aa13.29□□□□□ -0.28
CCL21-201ENST00000259607 SERPINB2P05120 415 aa13.29□□□□□ -0.28
CCL21-201ENST00000259607 ST5P78524 1137 aa13.29□□□□□ -0.28
CCL21-201ENST00000259607 GOLGA2Q08379 1002 aa13.29□□□□□ -0.28
CCL21-201ENST00000259607 CCDC30Q5VVM6 783 aa13.29□□□□□ -0.28
CCL21-201ENST00000259607 DUSP27Q5VZP5 1158 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms