RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 PNISRQ8TF01 805 aaKnown RBP23.63■■□□□ 1.37
SNRPA1-201ENST00000254193 SRP68Q9UHB9 627 aaKnown RBP23.63■■□□□ 1.37
SNRPA1-201ENST00000254193 UBR3Q6ZT12 1888 aa23.62■■□□□ 1.37
SNRPA1-201ENST00000254193 COL5A3P25940 1745 aaPredicted RBP23.62■■□□□ 1.37
SNRPA1-201ENST00000254193 APAF1O14727 1248 aa23.61■■□□□ 1.37
SNRPA1-201ENST00000254193 SNRPA1P09661 255 aaKnown RBP23.61■■□□□ 1.37
SNRPA1-201ENST00000254193 TRIM35Q9UPQ4 493 aa23.61■■□□□ 1.37
SNRPA1-201ENST00000254193 USP16Q9Y5T5 823 aa23.61■■□□□ 1.37
SNRPA1-201ENST00000254193 SIPA1L3O60292 1781 aaPredicted RBP23.6■■□□□ 1.37
SNRPA1-201ENST00000254193 CICQ96RK0 1608 aaPredicted RBP23.6■■□□□ 1.37
SNRPA1-201ENST00000254193 A1BGP04217 495 aa23.6■■□□□ 1.37
SNRPA1-201ENST00000254193 GYS1P13807 737 aa23.6■■□□□ 1.37
SNRPA1-201ENST00000254193 NLGN1Q8N2Q7 840 aa23.59■■□□□ 1.37
SNRPA1-201ENST00000254193 VIRMAQ69YN4 1812 aaKnown RBP23.59■■□□□ 1.37
SNRPA1-201ENST00000254193 UBR2Q8IWV8 1755 aa23.58■■□□□ 1.37
SNRPA1-201ENST00000254193 MMP10P09238 476 aa23.58■■□□□ 1.37
SNRPA1-201ENST00000254193 TSPYL4Q9UJ04 414 aa23.58■■□□□ 1.37
SNRPA1-201ENST00000254193 USP42Q9H9J4 1324 aaKnown RBP23.58■■□□□ 1.36
SNRPA1-201ENST00000254193 EIF4A1P60842 406 aaKnown RBP23.57■■□□□ 1.36
SNRPA1-201ENST00000254193 MYH14Q7Z406 1995 aaKnown RBP23.57■■□□□ 1.36
SNRPA1-201ENST00000254193 COL15A1P39059 1388 aa23.56■■□□□ 1.36
SNRPA1-201ENST00000254193 PIP4K2AP48426 406 aaPredicted RBP23.56■■□□□ 1.36
SNRPA1-201ENST00000254193 EIF5P55010 431 aaKnown RBP23.56■■□□□ 1.36
SNRPA1-201ENST00000254193 FKBP8Q14318 412 aa23.56■■□□□ 1.36
SNRPA1-201ENST00000254193 ZNF330Q9Y3S2 320 aaPredicted RBP23.56■■□□□ 1.36
SNRPA1-201ENST00000254193 ZPR1O75312 459 aa23.55■■□□□ 1.36
SNRPA1-201ENST00000254193 USPL1Q5W0Q7 1092 aa23.55■■□□□ 1.36
SNRPA1-201ENST00000254193 SENP3-EIF4A1A0A087X0R7 540 aa23.54■■□□□ 1.36
SNRPA1-201ENST00000254193 NLGN2Q8NFZ4 835 aa23.54■■□□□ 1.36
SNRPA1-201ENST00000254193 NARFQ9UHQ1 456 aa23.54■■□□□ 1.36
SNRPA1-201ENST00000254193 GIGYF1O75420 1035 aaPredicted RBP23.53■■□□□ 1.36
SNRPA1-201ENST00000254193 IL6STP40189 918 aaPredicted RBP23.53■■□□□ 1.36
SNRPA1-201ENST00000254193 LAS1LQ9Y4W2 734 aaKnown RBP23.53■■□□□ 1.36
SNRPA1-201ENST00000254193 COL24A1Q17RW2 1714 aa23.53■■□□□ 1.36
SNRPA1-201ENST00000254193 BABAM1Q9NWV8 329 aa23.52■■□□□ 1.36
SNRPA1-201ENST00000254193 DLG5Q8TDM6 1919 aa23.52■■□□□ 1.36
SNRPA1-201ENST00000254193 A0A087WZG4 1122 aa23.51■■□□□ 1.35
SNRPA1-201ENST00000254193 CHL1O00533 1208 aa23.51■■□□□ 1.35
SNRPA1-201ENST00000254193 BCL2L12Q9HB09 334 aa23.51■■□□□ 1.35
SNRPA1-201ENST00000254193 TBC1D2BQ9UPU7 963 aa23.51■■□□□ 1.35
SNRPA1-201ENST00000254193 CD2APQ9Y5K6 639 aa23.51■■□□□ 1.35
SNRPA1-201ENST00000254193 NBPF26B4DH59 902 aa23.5■■□□□ 1.35
SNRPA1-201ENST00000254193 NBPF10Q6P3W6 841 aaKnown RBP23.5■■□□□ 1.35
SNRPA1-201ENST00000254193 NBPF15Q8N660 670 aa23.5■■□□□ 1.35
SNRPA1-201ENST00000254193 PARP3Q9Y6F1 533 aa23.5■■□□□ 1.35
SNRPA1-201ENST00000254193 NPM2Q86SE8 214 aaKnown RBP23.49■■□□□ 1.35
SNRPA1-201ENST00000254193 DCAF8L1A6NGE4 600 aa23.48■■□□□ 1.35
SNRPA1-201ENST00000254193 DDR1Q08345 913 aa23.48■■□□□ 1.35
SNRPA1-201ENST00000254193 TM4SF1P30408 202 aa23.47■■□□□ 1.35
SNRPA1-201ENST00000254193 NFIXQ14938 502 aa23.46■■□□□ 1.35
SNRPA1-201ENST00000254193 FAM9BQ8IZU0 186 aa23.46■■□□□ 1.35
SNRPA1-201ENST00000254193 KRT24Q2M2I5 525 aa23.45■■□□□ 1.34
SNRPA1-201ENST00000254193 DZIP3Q86Y13 1208 aaKnown RBP23.45■■□□□ 1.34
SNRPA1-201ENST00000254193 CFAP44Q96MT7 982 aa23.45■■□□□ 1.34
SNRPA1-201ENST00000254193 C4AP0C0L4 1744 aa23.45■■□□□ 1.34
SNRPA1-201ENST00000254193 POLRMTO00411 1230 aaKnown RBP23.44■■□□□ 1.34
SNRPA1-201ENST00000254193 CAMTA2O94983 1202 aa23.44■■□□□ 1.34
SNRPA1-201ENST00000254193 BICDL1Q6ZP65 573 aa23.44■■□□□ 1.34
SNRPA1-201ENST00000254193 KDM3BQ7LBC6 1761 aa23.43■■□□□ 1.34
SNRPA1-201ENST00000254193 EIF2S2P20042 333 aaKnown RBP23.43■■□□□ 1.34
SNRPA1-201ENST00000254193 PELP1Q8IZL8 1130 aaKnown RBP23.43■■□□□ 1.34
SNRPA1-201ENST00000254193 ZNF853P0CG23 659 aa23.42■■□□□ 1.34
SNRPA1-201ENST00000254193 CALD1Q05682 793 aaKnown RBP23.42■■□□□ 1.34
SNRPA1-201ENST00000254193 GPR162Q16538 588 aa23.42■■□□□ 1.34
SNRPA1-201ENST00000254193 NGEFQ8N5V2 710 aa23.42■■□□□ 1.34
SNRPA1-201ENST00000254193 MBIPQ9NS73 344 aa23.42■■□□□ 1.34
SNRPA1-201ENST00000254193 TBC1D9BQ66K14 1250 aa23.41■■□□□ 1.34
SNRPA1-201ENST00000254193 IFT57Q9NWB7 429 aa23.41■■□□□ 1.34
SNRPA1-201ENST00000254193 MYL6BP14649 208 aa23.4■■□□□ 1.34
SNRPA1-201ENST00000254193 NECTIN2Q92692 538 aa23.4■■□□□ 1.34
SNRPA1-201ENST00000254193 SALL2Q9Y467 1007 aaPredicted RBP23.4■■□□□ 1.34
SNRPA1-201ENST00000254193 GNAI1P63096 354 aa23.39■■□□□ 1.33
SNRPA1-201ENST00000254193 CCDC27Q2M243 656 aa23.39■■□□□ 1.33
SNRPA1-201ENST00000254193 WWC1Q8IX03 1113 aa23.39■■□□□ 1.33
SNRPA1-201ENST00000254193 WWC3Q9ULE0 1092 aa23.39■■□□□ 1.33
SNRPA1-201ENST00000254193 SERPINB2P05120 415 aa23.38■■□□□ 1.33
SNRPA1-201ENST00000254193 C10orf71Q711Q0 1435 aa23.38■■□□□ 1.33
SNRPA1-201ENST00000254193 PDIA6Q15084 440 aa23.37■■□□□ 1.33
SNRPA1-201ENST00000254193 ERBB4Q15303 1308 aa23.36■■□□□ 1.33
SNRPA1-201ENST00000254193 A0A0G2JLW4 131 aa23.36■■□□□ 1.33
SNRPA1-201ENST00000254193 ANXA1P04083 346 aa23.36■■□□□ 1.33
SNRPA1-201ENST00000254193 YBX3P16989 372 aaKnown RBP eCLIP23.36■■□□□ 1.33
SNRPA1-201ENST00000254193 TGFB2P61812 414 aa23.36■■□□□ 1.33
SNRPA1-201ENST00000254193 PROSER3Q2NL68 480 aa23.36■■□□□ 1.33
SNRPA1-201ENST00000254193 DUSP27Q5VZP5 1158 aa23.36■■□□□ 1.33
SNRPA1-201ENST00000254193 TTLL7Q6ZT98 887 aa23.36■■□□□ 1.33
SNRPA1-201ENST00000254193 DPEP1P16444 411 aa23.35■■□□□ 1.33
SNRPA1-201ENST00000254193 SETDB2Q96T68 719 aa23.35■■□□□ 1.33
SNRPA1-201ENST00000254193 HLFQ16534 295 aa23.34■■□□□ 1.33
SNRPA1-201ENST00000254193 NCBP3Q53F19 620 aaKnown RBP23.34■■□□□ 1.33
SNRPA1-201ENST00000254193 CLEC4GQ6UXB4 293 aa23.34■■□□□ 1.33
SNRPA1-201ENST00000254193 ZNF652Q9Y2D9 606 aa23.34■■□□□ 1.33
SNRPA1-201ENST00000254193 PXDNLA1KZ92 1463 aa23.33■■□□□ 1.33
SNRPA1-201ENST00000254193 ELL2O00472 640 aaPredicted RBP23.33■■□□□ 1.33
SNRPA1-201ENST00000254193 HDGFL1Q5TGJ6 251 aa23.33■■□□□ 1.33
SNRPA1-201ENST00000254193 LRP10Q7Z4F1 713 aa23.33■■□□□ 1.33
SNRPA1-201ENST00000254193 TSR2Q969E8 191 aaKnown RBP23.33■■□□□ 1.33
SNRPA1-201ENST00000254193 HOXB7P09629 217 aa23.32■■□□□ 1.32
SNRPA1-201ENST00000254193 KIF6Q6ZMV9 814 aa23.32■■□□□ 1.32
SNRPA1-201ENST00000254193 CARMIL3Q8ND23 1372 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms