RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 FKBP4Q02790 459 aaKnown RBP eCLIP11.36□□□□□ -0.59
CCDC113-201ENST00000219299 TTC39AQ5SRH9 613 aa11.36□□□□□ -0.59
CCDC113-201ENST00000219299 RTCBQ9Y3I0 505 aaKnown RBP11.36□□□□□ -0.59
CCDC113-201ENST00000219299 DZIP3Q86Y13 1208 aaKnown RBP11.36□□□□□ -0.59
CCDC113-201ENST00000219299 DNAJC10Q8IXB1 793 aa11.36□□□□□ -0.59
CCDC113-201ENST00000219299 CCNL1Q9UK58 526 aaPredicted RBP11.36□□□□□ -0.59
CCDC113-201ENST00000219299 SKOR2Q2VWA4 1001 aaPredicted RBP11.36□□□□□ -0.59
CCDC113-201ENST00000219299 NBPF5PQ86XG9 351 aaPredicted RBP11.36□□□□□ -0.59
CCDC113-201ENST00000219299 CEP170BQ9Y4F5 1589 aaPredicted RBP11.36□□□□□ -0.59
CCDC113-201ENST00000219299 MAP4K4O95819 1239 aaPredicted RBP11.36□□□□□ -0.59
CCDC113-201ENST00000219299 ARHGAP45Q92619 1136 aa11.36□□□□□ -0.59
CCDC113-201ENST00000219299 GNL3LQ9NVN8 582 aaKnown RBP11.36□□□□□ -0.59
CCDC113-201ENST00000219299 SMARCA5O60264 1052 aaPredicted RBP11.35□□□□□ -0.59
CCDC113-201ENST00000219299 DDX21Q9NR30 783 aaKnown RBP eCLIP11.35□□□□□ -0.59
CCDC113-201ENST00000219299 ZNF219Q9P2Y4 722 aaPredicted RBP11.35□□□□□ -0.59
CCDC113-201ENST00000219299 IGSF1Q8N6C5 1336 aa11.35□□□□□ -0.59
CCDC113-201ENST00000219299 RICTORQ6R327 1708 aa11.35□□□□□ -0.59
CCDC113-201ENST00000219299 KCNQ3O43525 872 aa11.35□□□□□ -0.59
CCDC113-201ENST00000219299 NUTM1Q86Y26 1132 aa11.35□□□□□ -0.59
CCDC113-201ENST00000219299 AMOTL1Q8IY63 956 aa11.35□□□□□ -0.59
CCDC113-201ENST00000219299 NIP7Q9Y221 180 aaKnown RBP eCLIP11.35□□□□□ -0.59
CCDC113-201ENST00000219299 C1orf167Q5SNV9 1468 aa11.35□□□□□ -0.59
CCDC113-201ENST00000219299 SPATA31D1Q6ZQQ2 1576 aa11.35□□□□□ -0.59
CCDC113-201ENST00000219299 ZC3H13Q5T200 1668 aaKnown RBP11.35□□□□□ -0.59
CCDC113-201ENST00000219299 GNPATO15228 680 aa11.35□□□□□ -0.59
CCDC113-201ENST00000219299 PPP1R42Q7Z4L9 355 aa11.35□□□□□ -0.59
CCDC113-201ENST00000219299 PREX1Q8TCU6 1659 aa11.35□□□□□ -0.59
CCDC113-201ENST00000219299 CWF19L2Q2TBE0 894 aaKnown RBP11.35□□□□□ -0.59
CCDC113-201ENST00000219299 G2E3Q7L622 706 aa11.35□□□□□ -0.59
CCDC113-201ENST00000219299 KIF1BPQ96EK5 621 aa11.35□□□□□ -0.59
CCDC113-201ENST00000219299 SETDB2Q96T68 719 aa11.35□□□□□ -0.59
CCDC113-201ENST00000219299 CDC45O75419 566 aa11.34□□□□□ -0.59
CCDC113-201ENST00000219299 RAD21O60216 631 aa11.34□□□□□ -0.59
CCDC113-201ENST00000219299 LDHAL6AQ6ZMR3 332 aa11.34□□□□□ -0.59
CCDC113-201ENST00000219299 PTPRUQ92729 1446 aa11.34□□□□□ -0.59
CCDC113-201ENST00000219299 TRDNQ13061 729 aa11.34□□□□□ -0.59
CCDC113-201ENST00000219299 SKAP1Q86WV1 359 aa11.34□□□□□ -0.59
CCDC113-201ENST00000219299 LINS1Q8NG48 757 aa11.34□□□□□ -0.59
CCDC113-201ENST00000219299 TRIM34Q9BYJ4 488 aa11.34□□□□□ -0.59
CCDC113-201ENST00000219299 PTCH1Q13635 1447 aa11.33□□□□□ -0.59
CCDC113-201ENST00000219299 ANKRD18BA2A2Z9 1011 aa11.33□□□□□ -0.6
CCDC113-201ENST00000219299 RNF20Q5VTR2 975 aa11.33□□□□□ -0.6
CCDC113-201ENST00000219299 RPGRQ92834 1020 aaKnown RBP11.33□□□□□ -0.6
CCDC113-201ENST00000219299 GRM8O00222 908 aa11.33□□□□□ -0.6
CCDC113-201ENST00000219299 ERVV-2B6SEH9 535 aa11.32□□□□□ -0.6
CCDC113-201ENST00000219299 RLBP1P12271 317 aa11.32□□□□□ -0.6
CCDC113-201ENST00000219299 CCDC8Q9H0W5 538 aaPredicted RBP11.32□□□□□ -0.6
CCDC113-201ENST00000219299 ANKIB1Q9P2G1 1089 aa11.32□□□□□ -0.6
CCDC113-201ENST00000219299 ABCF2Q9UG63 623 aa11.32□□□□□ -0.6
CCDC113-201ENST00000219299 EIF4A1P60842 406 aaKnown RBP11.32□□□□□ -0.6
CCDC113-201ENST00000219299 UNC5CLQ8IV45 518 aa11.32□□□□□ -0.6
CCDC113-201ENST00000219299 BABAM1Q9NWV8 329 aa11.32□□□□□ -0.6
CCDC113-201ENST00000219299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.32□□□□□ -0.6
CCDC113-201ENST00000219299 USP16Q9Y5T5 823 aa11.32□□□□□ -0.6
CCDC113-201ENST00000219299 APBA3O96018 575 aa11.32□□□□□ -0.6
CCDC113-201ENST00000219299 SLC4A3P48751 1232 aa11.32□□□□□ -0.6
CCDC113-201ENST00000219299 LMBR1LQ6UX01 489 aa11.32□□□□□ -0.6
CCDC113-201ENST00000219299 PLEKHF1Q96S99 279 aa11.32□□□□□ -0.6
CCDC113-201ENST00000219299 VWDEQ8N2E2 1590 aa11.32□□□□□ -0.6
CCDC113-201ENST00000219299 TULP1O00294 542 aaPredicted RBP11.31□□□□□ -0.6
CCDC113-201ENST00000219299 CSPP1Q1MSJ5 1256 aa11.31□□□□□ -0.6
CCDC113-201ENST00000219299 TULP4Q9NRJ4 1543 aa11.31□□□□□ -0.6
CCDC113-201ENST00000219299 DCAF8L1A6NGE4 600 aa11.31□□□□□ -0.6
CCDC113-201ENST00000219299 IFIT1P09914 478 aaKnown RBP11.31□□□□□ -0.6
CCDC113-201ENST00000219299 SETBP1Q9Y6X0 1596 aa11.31□□□□□ -0.6
CCDC113-201ENST00000219299 ALDH1L1O75891 902 aa11.3□□□□□ -0.6
CCDC113-201ENST00000219299 DDX46Q7L014 1031 aaKnown RBP11.3□□□□□ -0.6
CCDC113-201ENST00000219299 CHMP4CQ96CF2 233 aa11.3□□□□□ -0.6
CCDC113-201ENST00000219299 BOLA2Q9H3K6 86 aa11.3□□□□□ -0.6
CCDC113-201ENST00000219299 WWC3Q9ULE0 1092 aa11.3□□□□□ -0.6
CCDC113-201ENST00000219299 RTL1A6NKG5 1358 aa11.3□□□□□ -0.6
CCDC113-201ENST00000219299 IDH1O75874 414 aaKnown RBP11.3□□□□□ -0.6
CCDC113-201ENST00000219299 TRAPPC3LQ5T215 181 aa11.3□□□□□ -0.6
CCDC113-201ENST00000219299 ZNF622Q969S3 477 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCDC113-201ENST00000219299 ASAP1Q9ULH1 1129 aa11.3□□□□□ -0.6
CCDC113-201ENST00000219299 HSPA1LP34931 641 aa11.3□□□□□ -0.6
CCDC113-201ENST00000219299 NLRP3Q96P20 1036 aa11.3□□□□□ -0.6
CCDC113-201ENST00000219299 C22orf23Q9BZE7 217 aa11.3□□□□□ -0.6
CCDC113-201ENST00000219299 RALYLQ86SE5 291 aaKnown RBP11.3□□□□□ -0.6
CCDC113-201ENST00000219299 LRP2BPQ9P2M1 347 aa11.3□□□□□ -0.6
CCDC113-201ENST00000219299 AKAP2Q9Y2D5 859 aa11.3□□□□□ -0.6
CCDC113-201ENST00000219299 PCDHB15Q9Y5E8 787 aa11.3□□□□□ -0.6
CCDC113-201ENST00000219299 FER1L4A9Z1Z3 1794 aa11.3□□□□□ -0.6
CCDC113-201ENST00000219299 C6orf229H3BNL8 230 aa11.29□□□□□ -0.6
CCDC113-201ENST00000219299 GIGYF1O75420 1035 aaPredicted RBP11.29□□□□□ -0.6
CCDC113-201ENST00000219299 SYNE3Q6ZMZ3 975 aa11.29□□□□□ -0.6
CCDC113-201ENST00000219299 CDC5LQ99459 802 aaKnown RBP11.29□□□□□ -0.6
CCDC113-201ENST00000219299 TNS3Q68CZ2 1445 aa11.29□□□□□ -0.6
CCDC113-201ENST00000219299 HOXB7P09629 217 aa11.29□□□□□ -0.6
CCDC113-201ENST00000219299 ZNF772Q68DY9 489 aaPredicted RBP11.29□□□□□ -0.6
CCDC113-201ENST00000219299 RAB11FIP3O75154 756 aa11.29□□□□□ -0.6
CCDC113-201ENST00000219299 RXRBP28702 533 aa11.29□□□□□ -0.6
CCDC113-201ENST00000219299 NBPF14Q5TI25 921 aa11.29□□□□□ -0.6
CCDC113-201ENST00000219299 TPTE2Q6XPS3 522 aa11.29□□□□□ -0.6
CCDC113-201ENST00000219299 KIF24Q5T7B8 1368 aa11.29□□□□□ -0.6
CCDC113-201ENST00000219299 TPM4P67936 248 aa11.29□□□□□ -0.6
CCDC113-201ENST00000219299 FOXD4L5Q5VV16 416 aaPredicted RBP11.29□□□□□ -0.6
CCDC113-201ENST00000219299 FOXD4L4Q8WXT5 416 aaPredicted RBP11.29□□□□□ -0.6
CCDC113-201ENST00000219299 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.29□□□□□ -0.6
CCDC113-201ENST00000219299 BCORL1Q5H9F3 1711 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms