RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 VPS37CA5D8V6 355 aaPredicted RBP15.58■□□□□ 0.08
PCDHB4-201ENST00000194152 GSPT1P15170 499 aaKnown RBP15.58■□□□□ 0.08
PCDHB4-201ENST00000194152 PDE1AP54750 535 aa15.58■□□□□ 0.08
PCDHB4-201ENST00000194152 C19orf44Q9H6X5 657 aa15.58■□□□□ 0.08
PCDHB4-201ENST00000194152 DCTPP1Q9H773 170 aa15.58■□□□□ 0.08
PCDHB4-201ENST00000194152 PRPF40AO75400 957 aaKnown RBP15.58■□□□□ 0.08
PCDHB4-201ENST00000194152 TSC1Q92574 1164 aa15.58■□□□□ 0.08
PCDHB4-201ENST00000194152 ANTXR1Q9H6X2 564 aa15.58■□□□□ 0.08
PCDHB4-201ENST00000194152 K7ELQ4 463 aaPredicted RBP15.57■□□□□ 0.08
PCDHB4-201ENST00000194152 ARHGEF40Q8TER5 1519 aa15.57■□□□□ 0.08
PCDHB4-201ENST00000194152 CD2BP2O95400 341 aaKnown RBP15.57■□□□□ 0.08
PCDHB4-201ENST00000194152 DBF4Q9UBU7 674 aaPredicted RBP15.57■□□□□ 0.08
PCDHB4-201ENST00000194152 SBNO1A3KN83 1393 aa15.57■□□□□ 0.08
PCDHB4-201ENST00000194152 OFD1O75665 1012 aa15.57■□□□□ 0.08
PCDHB4-201ENST00000194152 LMTK2Q8IWU2 1503 aa15.56■□□□□ 0.08
PCDHB4-201ENST00000194152 ZNF771Q7L3S4 317 aaPredicted RBP15.56■□□□□ 0.08
PCDHB4-201ENST00000194152 TOMM22Q9NS69 142 aa15.56■□□□□ 0.08
PCDHB4-201ENST00000194152 GTF2E1P29083 439 aaPredicted RBP15.56■□□□□ 0.08
PCDHB4-201ENST00000194152 SKOR2Q2VWA4 1001 aaPredicted RBP15.56■□□□□ 0.08
PCDHB4-201ENST00000194152 SNRKQ9NRH2 765 aa15.56■□□□□ 0.08
PCDHB4-201ENST00000194152 PTPRCP08575 1304 aa15.56■□□□□ 0.08
PCDHB4-201ENST00000194152 VWDEQ8N2E2 1590 aa15.56■□□□□ 0.08
PCDHB4-201ENST00000194152 A0A087WZG4 1122 aa15.56■□□□□ 0.08
PCDHB4-201ENST00000194152 MAP3K5Q99683 1374 aa15.55■□□□□ 0.08
PCDHB4-201ENST00000194152 SPDYE4A6NLX3 237 aa15.55■□□□□ 0.08
PCDHB4-201ENST00000194152 ZNF853P0CG23 659 aa15.55■□□□□ 0.08
PCDHB4-201ENST00000194152 PRDM4Q9UKN5 801 aa15.55■□□□□ 0.08
PCDHB4-201ENST00000194152 ZGPATQ8N5A5 531 aaKnown RBP15.55■□□□□ 0.08
PCDHB4-201ENST00000194152 PLEKHG1Q9ULL1 1385 aa15.55■□□□□ 0.08
PCDHB4-201ENST00000194152 RNMTO43148 476 aaKnown RBP15.54■□□□□ 0.08
PCDHB4-201ENST00000194152 USP16Q9Y5T5 823 aa15.54■□□□□ 0.08
PCDHB4-201ENST00000194152 RHPN1Q8TCX5 695 aa15.54■□□□□ 0.08
PCDHB4-201ENST00000194152 EDC3Q96F86 508 aaKnown RBP15.54■□□□□ 0.08
PCDHB4-201ENST00000194152 ACSBG1Q96GR2 724 aa15.54■□□□□ 0.08
PCDHB4-201ENST00000194152 ZNF496Q96IT1 587 aaPredicted RBP15.54■□□□□ 0.08
PCDHB4-201ENST00000194152 USP44Q9H0E7 712 aa15.53■□□□□ 0.08
PCDHB4-201ENST00000194152 NLRP1Q9C000 1473 aa15.53■□□□□ 0.08
PCDHB4-201ENST00000194152 FKBP4Q02790 459 aaKnown RBP eCLIP15.53■□□□□ 0.08
PCDHB4-201ENST00000194152 FBXW7Q969H0 707 aa15.53■□□□□ 0.08
PCDHB4-201ENST00000194152 FAM135BQ49AJ0 1406 aa15.53■□□□□ 0.08
PCDHB4-201ENST00000194152 BICDL1Q6ZP65 573 aa15.53■□□□□ 0.08
PCDHB4-201ENST00000194152 A1BGP04217 495 aa15.52■□□□□ 0.08
PCDHB4-201ENST00000194152 WASHC4Q2M389 1173 aa15.52■□□□□ 0.08
PCDHB4-201ENST00000194152 PRPF40BQ6NWY9 871 aaKnown RBP15.52■□□□□ 0.08
PCDHB4-201ENST00000194152 FERMT3Q86UX7 667 aa15.52■□□□□ 0.08
PCDHB4-201ENST00000194152 UNC5CLQ8IV45 518 aa15.52■□□□□ 0.08
PCDHB4-201ENST00000194152 CNTROBQ8N137 903 aa15.52■□□□□ 0.08
PCDHB4-201ENST00000194152 CGNQ9P2M7 1197 aaKnown RBP15.52■□□□□ 0.08
PCDHB4-201ENST00000194152 NRXN1Q9ULB1 1477 aa15.52■□□□□ 0.08
PCDHB4-201ENST00000194152 PTPRUQ92729 1446 aa15.52■□□□□ 0.08
PCDHB4-201ENST00000194152 LRRC7Q96NW7 1537 aa15.52■□□□□ 0.08
PCDHB4-201ENST00000194152 APPP05067 770 aa15.52■□□□□ 0.08
PCDHB4-201ENST00000194152 AMOTQ4VCS5 1084 aa15.52■□□□□ 0.08
PCDHB4-201ENST00000194152 AKAP4Q5JQC9 854 aa15.52■□□□□ 0.08
PCDHB4-201ENST00000194152 ABCC4O15439 1325 aa15.51■□□□□ 0.07
PCDHB4-201ENST00000194152 MYO5BQ9ULV0 1848 aa15.51■□□□□ 0.07
PCDHB4-201ENST00000194152 DEPDC5O75140 1603 aa15.51■□□□□ 0.07
PCDHB4-201ENST00000194152 EIF4A1P60842 406 aaKnown RBP15.51■□□□□ 0.07
PCDHB4-201ENST00000194152 CEBPZQ03701 1054 aaKnown RBP15.51■□□□□ 0.07
PCDHB4-201ENST00000194152 SIGLEC1Q9BZZ2 1709 aa15.51■□□□□ 0.07
PCDHB4-201ENST00000194152 CD163L1Q9NR16 1453 aa15.51■□□□□ 0.07
PCDHB4-201ENST00000194152 CADPS2Q86UW7 1296 aa15.51■□□□□ 0.07
PCDHB4-201ENST00000194152 IFNL2Q8IZJ0 200 aa15.51■□□□□ 0.07
PCDHB4-201ENST00000194152 ATP8B2P98198 1209 aa15.5■□□□□ 0.07
PCDHB4-201ENST00000194152 HSP90AB3PQ58FF7 597 aa15.5■□□□□ 0.07
PCDHB4-201ENST00000194152 RABEP1Q15276 862 aa15.5■□□□□ 0.07
PCDHB4-201ENST00000194152 KIF1BPQ96EK5 621 aa15.5■□□□□ 0.07
PCDHB4-201ENST00000194152 JAKMIP1Q96N16 626 aaKnown RBP15.5■□□□□ 0.07
PCDHB4-201ENST00000194152 ISY1Q9ULR0 285 aaKnown RBP15.5■□□□□ 0.07
PCDHB4-201ENST00000194152 ADAMTS13Q76LX8 1427 aa15.5■□□□□ 0.07
PCDHB4-201ENST00000194152 FIBPO43427 364 aa15.5■□□□□ 0.07
PCDHB4-201ENST00000194152 KIAA2012Q0VF49 1180 aa15.5■□□□□ 0.07
PCDHB4-201ENST00000194152 MTERF4Q7Z6M4 381 aaKnown RBP15.5■□□□□ 0.07
PCDHB4-201ENST00000194152 ANKRD13DQ6ZTN6 518 aa15.49■□□□□ 0.07
PCDHB4-201ENST00000194152 RAB11FIP4Q86YS3 637 aa15.49■□□□□ 0.07
PCDHB4-201ENST00000194152 SMAP1Q8IYB5 467 aaPredicted RBP15.49■□□□□ 0.07
PCDHB4-201ENST00000194152 LRRC2Q9BYS8 371 aa15.49■□□□□ 0.07
PCDHB4-201ENST00000194152 RTL1A6NKG5 1358 aa15.49■□□□□ 0.07
PCDHB4-201ENST00000194152 ATP7BP35670 1465 aa15.49■□□□□ 0.07
PCDHB4-201ENST00000194152 CASTP20810 708 aaKnown RBP15.49■□□□□ 0.07
PCDHB4-201ENST00000194152 DDX46Q7L014 1031 aaKnown RBP15.49■□□□□ 0.07
PCDHB4-201ENST00000194152 CHMP4AQ9BY43 222 aa15.49■□□□□ 0.07
PCDHB4-201ENST00000194152 BICC1Q9H694 974 aaKnown RBP15.49■□□□□ 0.07
PCDHB4-201ENST00000194152 IGSF1Q8N6C5 1336 aa15.49■□□□□ 0.07
PCDHB4-201ENST00000194152 PNPLA6Q8IY17 1366 aa15.49■□□□□ 0.07
PCDHB4-201ENST00000194152 PIK3R4Q99570 1358 aa15.49■□□□□ 0.07
PCDHB4-201ENST00000194152 ZKSCAN1P17029 563 aaPredicted RBP15.48■□□□□ 0.07
PCDHB4-201ENST00000194152 PKP1Q13835 747 aa15.48■□□□□ 0.07
PCDHB4-201ENST00000194152 CSPP1Q1MSJ5 1256 aa15.48■□□□□ 0.07
PCDHB4-201ENST00000194152 DIP2BQ9P265 1576 aa15.48■□□□□ 0.07
PCDHB4-201ENST00000194152 MYO3AQ8NEV4 1616 aa15.48■□□□□ 0.07
PCDHB4-201ENST00000194152 ZRSR1Q15695 479 aaKnown RBP15.48■□□□□ 0.07
PCDHB4-201ENST00000194152 DRC7Q8IY82 874 aa15.48■□□□□ 0.07
PCDHB4-201ENST00000194152 TMEM94Q12767 1356 aa15.48■□□□□ 0.07
PCDHB4-201ENST00000194152 LAMC1P11047 1609 aa15.48■□□□□ 0.07
PCDHB4-201ENST00000194152 PDIA4P13667 645 aaKnown RBP15.48■□□□□ 0.07
PCDHB4-201ENST00000194152 NUCB2P80303 420 aa15.48■□□□□ 0.07
PCDHB4-201ENST00000194152 ZNF790Q6PG37 636 aa15.48■□□□□ 0.07
PCDHB4-201ENST00000194152 SOS1Q07889 1333 aaPredicted RBP15.47■□□□□ 0.07
PCDHB4-201ENST00000194152 SETBP1Q9Y6X0 1596 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms