RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Slit1Q80TR4 1531 aa12.46□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Mcm4P49717 862 aa12.46□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Atf3Q60765 181 aa12.46□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 SympkQ80X82 1284 aa12.46□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Amigo3Q8C2S7 508 aa12.46□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Dmrtc1Q9D9R7 182 aa12.46□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Gm21698A0A087WQP8 267 aa12.45□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Gm21671G3UY31 267 aa12.45□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Map3k2Q61083 619 aa12.45□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Ccdc155Q80VJ8 648 aa12.45□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Casq1O09165 405 aa12.44□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Cfdp1O88271 295 aaKnown RBP12.44□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Cct4P80315 539 aaKnown RBP12.44□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Iqsec3Q3TES0 1195 aa12.44□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Irf9Q61179 399 aa12.44□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Mphosph10Q810V0 681 aaKnown RBP12.44□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 DccP70211 1447 aa12.44□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Tgfb1i1Q62219 461 aa12.44□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Morc2aQ69ZX6 1030 aa12.44□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Unc5clQ6R653 518 aa12.44□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Ddx60E9PZQ1 1711 aa12.43□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Eif3aP23116 1344 aaKnown RBP12.43□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Bcl2l13P59017 434 aa12.43□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Pip4k2bQ80XI4 416 aa12.43□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Kiaa0232Q80U59 1396 aaKnown RBP12.43□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Zfp142G5E869 1843 aa12.43□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Abcc4E9Q236 1325 aa12.43□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Igfbp6P47880 238 aa12.42□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Mum1Q6DID5 682 aa12.42□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Ppm1mQ8BU27 406 aa12.42□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Ssfa2Q922B9 1252 aa12.42□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Anapc15P60007 132 aa12.42□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Irx3P81067 507 aa12.42□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Stk11ipQ3TAA7 1072 aa12.42□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Chmp7Q8R1T1 451 aa12.42□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Tceal9Q9DD24 104 aa12.42□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Map3k13Q1HKZ5 959 aa12.41□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Zranb3Q6NZP1 1069 aa12.41□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 LlphQ9D945 130 aaKnown RBP12.41□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Shank2Q80Z38 1476 aa12.41□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Vwa3bJ9JI28 736 aa12.4□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Slc4a10Q5DTL9 1118 aa12.4□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Asic4Q7TNS7 539 aa12.4□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 RgmbQ7TQ33 436 aa12.4□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Zkscan1Q8BGS3 561 aaKnown RBP12.4□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Bloc1s4Q8VED2 215 aa12.4□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Ms4a2P20490 235 aa12.4□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Grm8P47743 908 aa12.4□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Bicc1Q99MQ1 977 aaKnown RBP12.4□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 4933402E13RikQ9D4D2 429 aa12.4□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Pmfbp1Q9WVQ0 1022 aa12.4□□□□□ -0.42
Cpsf3-211ENSMUST00000222968 Plcb2A3KGF7 1181 aa12.39□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Brpf1B2RRD7 1212 aa12.39□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Bag4Q8CI61 457 aa12.39□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 VgfQ0VGU4 617 aa12.38□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Fam228bQ497Q6 232 aa12.38□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 4930572O03RikQ8C5Y0 211 aa12.38□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Hsp90b1P08113 802 aaKnown RBP12.38□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Pa2g4P50580 394 aaKnown RBP12.38□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Zdhhc9P59268 364 aa12.38□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 AnlnQ8K298 1121 aaKnown RBP12.38□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 MccE9PWI3 1003 aa12.37□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Prkab2Q6PAM0 271 aa12.37□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Zbtb3Q91X45 518 aa12.37□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 TefQ9JLC6 301 aa12.37□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Fam50bQ9WTJ8 334 aa12.37□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Rad50P70388 1312 aa12.37□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Ttll7A4Q9F0 912 aa12.36□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Spryd3E9Q9B3 442 aa12.36□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Nlrp9bQ66X22 1003 aa12.36□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Taf5lQ91WQ5 589 aa12.36□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Lmbr1lQ9D1E5 489 aa12.36□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Ccdc7Q9D541 371 aa12.36□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 PigbQ9JJQ0 542 aa12.36□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Tshz3Q8CGV9 1081 aa12.36□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Eif3bQ8JZQ9 803 aaKnown RBP12.36□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Rasa1E9PYG6 1038 aa12.35□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Cnnm1Q0GA42 951 aa12.35□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Isy1Q69ZQ2 285 aaKnown RBP12.35□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 NexnQ7TPW1 607 aa12.35□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 MypnQ5DTJ9 1315 aa12.35□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Plekhd1B2RPU2 505 aa12.34□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Gtf3c3Q3TMP1 882 aa12.34□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Larp1Q6ZQ58 1072 aaKnown RBP12.34□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Cadps2Q8BYR5 1297 aa12.34□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Brf1Q8CFK2 676 aa12.34□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Tiam2Q6ZPF3 1715 aa12.34□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Brinp3Q499E0 766 aa12.34□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Utp18Q5SSI6 552 aaKnown RBP12.34□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Ripor2Q80U16 1078 aa12.34□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Jakmip1Q8BVL9 626 aa12.34□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Slx1bQ8BX32 270 aa12.34□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 PtmsQ9D0J8 101 aaKnown RBP12.34□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Gdpd2Q9ESM6 539 aa12.34□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Mlh1Q9JK91 760 aa12.34□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 Add2Q9QYB8 725 aa12.34□□□□□ -0.43
Cpsf3-211ENSMUST00000222968 EvcP57680 1005 aa12.33□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 EspnlQ3UYR4 1005 aa12.33□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Pdzrn3Q69ZS0 1063 aa12.33□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Stk3Q9JI10 497 aa12.33□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms