RNA–Protein interactions for RNA: ENSMUST00000214204.1

Chrna3-202, Transcript of Neuronal acetylcholine receptor subunit alpha-3, mousemouse

TSL 1 (best) BASIC

Gene Chrna3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3-202ENSMUST00000214204 Atl3Q91YH5 541 aa18.4■□□□□ 0.54
Chrna3-202ENSMUST00000214204 Ltbp1Q8CG19 1712 aa18.4■□□□□ 0.54
Chrna3-202ENSMUST00000214204 Tlr7P58681 1050 aa18.4■□□□□ 0.54
Chrna3-202ENSMUST00000214204 Cypt2Q6P924 180 aa18.4■□□□□ 0.54
Chrna3-202ENSMUST00000214204 Mst1rQ62190 1378 aa18.39■□□□□ 0.54
Chrna3-202ENSMUST00000214204 Fam71e1A1L3C1 212 aa18.39■□□□□ 0.53
Chrna3-202ENSMUST00000214204 Dcaf5Q80T85 946 aa18.38■□□□□ 0.53
Chrna3-202ENSMUST00000214204 Smarca5Q91ZW3 1051 aaKnown RBP18.38■□□□□ 0.53
Chrna3-202ENSMUST00000214204 InhbeO08717 350 aa18.38■□□□□ 0.53
Chrna3-202ENSMUST00000214204 FanclQ9CR14 375 aa18.38■□□□□ 0.53
Chrna3-202ENSMUST00000214204 CarsQ9ER72 831 aaKnown RBP18.38■□□□□ 0.53
Chrna3-202ENSMUST00000214204 Hs1bp3Q3TC93 395 aa18.37■□□□□ 0.53
Chrna3-202ENSMUST00000214204 Srgap3Q812A2 1099 aa18.37■□□□□ 0.53
Chrna3-202ENSMUST00000214204 Ppp1r42Q8R1Z4 357 aa18.37■□□□□ 0.53
Chrna3-202ENSMUST00000214204 Cwc27Q3TKY6 469 aa18.37■□□□□ 0.53
Chrna3-202ENSMUST00000214204 Ppm1mQ8BU27 406 aa18.36■□□□□ 0.53
Chrna3-202ENSMUST00000214204 Lmbr1lQ9D1E5 489 aa18.35■□□□□ 0.53
Chrna3-202ENSMUST00000214204 Stk36Q69ZM6 1316 aa18.35■□□□□ 0.53
Chrna3-202ENSMUST00000214204 Gm12185Q5NCB2 835 aa18.35■□□□□ 0.53
Chrna3-202ENSMUST00000214204 HnrnpuQ8VEK3 800 aaKnown RBP18.35■□□□□ 0.53
Chrna3-202ENSMUST00000214204 Nav1Q8CH77 1875 aa18.35■□□□□ 0.53
Chrna3-202ENSMUST00000214204 MypnQ5DTJ9 1315 aa18.34■□□□□ 0.53
Chrna3-202ENSMUST00000214204 GakQ99KY4 1305 aa18.34■□□□□ 0.53
Chrna3-202ENSMUST00000214204 Ppp2r3aB2RXC8 1150 aa18.34■□□□□ 0.53
Chrna3-202ENSMUST00000214204 Trim30dE9PWL0 497 aa18.34■□□□□ 0.53
Chrna3-202ENSMUST00000214204 Egfem1Q8C088 590 aa18.34■□□□□ 0.53
Chrna3-202ENSMUST00000214204 Ddx60E9PZQ1 1711 aa18.34■□□□□ 0.53
Chrna3-202ENSMUST00000214204 Brd1E9PZ26 1189 aaKnown RBP18.33■□□□□ 0.53
Chrna3-202ENSMUST00000214204 Trim52Q8CDV4 233 aa18.33■□□□□ 0.53
Chrna3-202ENSMUST00000214204 Ubap1lG3UW59 384 aa18.33■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Vps33bP59016 617 aa18.33■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Atp8b2P98199 1209 aa18.33■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Wwc1Q5SXA9 1104 aa18.32■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Tgfb1i1Q62219 461 aa18.32■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Morc2aQ69ZX6 1030 aa18.32■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Kif18aQ91WD7 886 aa18.32■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Ccdc146E9Q9F7 977 aa18.32■□□□□ 0.52
Chrna3-202ENSMUST00000214204 HellsQ60848 821 aa18.32■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Ankle2Q6P1H6 964 aa18.32■□□□□ 0.52
Chrna3-202ENSMUST00000214204 NmiO35309 314 aa18.31■□□□□ 0.52
Chrna3-202ENSMUST00000214204 LifrP42703 1092 aa18.31■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Adam1aQ60813 791 aa18.31■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Eif4g2Q62448 906 aaKnown RBP18.31■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Jmjd4Q8BFT6 427 aa18.31■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Slfnl1Q8BHW9 410 aa18.3■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Ier5O89113 308 aa18.3■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Grm8P47743 908 aa18.3■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Slc4a10Q5DTL9 1118 aa18.3■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Cog6Q8R3I3 657 aa18.3■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Nip7Q9CXK8 180 aaKnown RBP18.3■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Ank1Q02357 1862 aa18.29■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Jarid2Q62315 1234 aa18.29■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Mylk2Q8VCR8 613 aa18.29■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Nphp1Q9QY53 687 aa18.29■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Atg4a-psA0A0G2JFS9 396 aa18.29■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Zbtb40Q6PCS8 1258 aa18.29■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Atg4aQ8C9S8 396 aa18.29■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Mmp8O70138 465 aa18.28■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Dmrt2Q8BG36 561 aa18.28■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Miga2Q8BK03 593 aa18.28■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Klc3Q91W40 508 aa18.28■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Zbtb1Q91VL9 713 aa18.28■□□□□ 0.52
Chrna3-202ENSMUST00000214204 Fkbp5Q64378 456 aa18.27■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Soga3Q6NZL0 945 aa18.27■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Ripor2Q80U16 1078 aa18.27■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Bicdl1A0JNT9 577 aa18.26■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Pa2g4P50580 394 aaKnown RBP18.26■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Gigyf1Q99MR1 1044 aaKnown RBP18.26■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Ltb4r2Q9JJL9 360 aa18.26■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Sart3Q9JLI8 962 aaKnown RBP18.26■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Phlpp2Q8BXA7 1320 aa18.26■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Ccdc183A2AJB1 534 aa18.25■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Ak7Q9D2H2 614 aa18.25■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Erbb4Q61527 1308 aa18.25■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Ccdc27Q3V036 639 aa18.25■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Aldh8a1Q8BH00 487 aa18.25■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Abca3Q8R420 1704 aa18.24■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Wdr63B2RY71 923 aa18.23■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Ankib1Q6ZPS6 1085 aa18.23■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Q8BT18 775 aa18.23■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Taok3Q8BYC6 898 aa18.23■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Cetn4Q8K4K1 168 aa18.23■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Sipa1l3G3X9J0 1776 aa18.23■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Kndc1Q0KK55 1742 aa18.23■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Eif3aP23116 1344 aaKnown RBP18.23■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Ddx58Q6Q899 926 aa18.23■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Tceal9Q9DD24 104 aa18.23■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Map7O88735 730 aa18.22■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Lrit1Q8K099 624 aa18.22■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Sos2Q02384 1333 aa18.22■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Igflr1Q3U4N7 345 aa18.22■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Mcmdc2E9Q956 681 aa18.21■□□□□ 0.51
Chrna3-202ENSMUST00000214204 AK157302I3ITR1 129 aa18.21■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Ppfibp2O35711 882 aa18.21■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Strn4P58404 760 aa18.21■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Pde4dQ01063 747 aa18.21■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Isca1Q9D924 129 aa18.21■□□□□ 0.51
Chrna3-202ENSMUST00000214204 4930523C07RikE9Q2T4 99 aa18.21■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Fnbp4Q6ZQ03 1031 aa18.21■□□□□ 0.51
Chrna3-202ENSMUST00000214204 Bcar3Q9QZK2 820 aa18.21■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms