RNA–Protein interactions for RNA: ENSMUST00000211005.1

Nup98-204, Transcript of Nuclear pore complex protein Nup98-Nup96, mousemouse

TSL 1 (best) BASIC

Gene Nup98, Length 3,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98-204ENSMUST00000211005 Trim52Q8CDV4 233 aa11.88□□□□□ -0.51
Nup98-204ENSMUST00000211005 Sipa1l3G3X9J0 1776 aa11.88□□□□□ -0.51
Nup98-204ENSMUST00000211005 Gm12185Q5NCB2 835 aa11.87□□□□□ -0.51
Nup98-204ENSMUST00000211005 Mphosph10Q810V0 681 aaKnown RBP11.87□□□□□ -0.51
Nup98-204ENSMUST00000211005 Taok3Q8BYC6 898 aa11.87□□□□□ -0.51
Nup98-204ENSMUST00000211005 Tm6sf1P58749 370 aa11.87□□□□□ -0.51
Nup98-204ENSMUST00000211005 1700123L14RikQ3V2K7 440 aa11.86□□□□□ -0.51
Nup98-204ENSMUST00000211005 Dbr1Q923B1 550 aa11.86□□□□□ -0.51
Nup98-204ENSMUST00000211005 Erbb4Q61527 1308 aa11.86□□□□□ -0.51
Nup98-204ENSMUST00000211005 B4galnt3Q6L8S8 986 aa11.86□□□□□ -0.51
Nup98-204ENSMUST00000211005 Ppm1mQ8BU27 406 aa11.86□□□□□ -0.51
Nup98-204ENSMUST00000211005 Klc3Q91W40 508 aa11.86□□□□□ -0.51
Nup98-204ENSMUST00000211005 Ly75Q60767 1723 aa11.86□□□□□ -0.51
Nup98-204ENSMUST00000211005 Ank1Q02357 1862 aa11.86□□□□□ -0.51
Nup98-204ENSMUST00000211005 Rps6ka4Q9Z2B9 773 aa11.86□□□□□ -0.51
Nup98-204ENSMUST00000211005 Map3k13Q1HKZ5 959 aa11.85□□□□□ -0.51
Nup98-204ENSMUST00000211005 Ankle2Q6P1H6 964 aa11.85□□□□□ -0.51
Nup98-204ENSMUST00000211005 Chmp5Q9D7S9 219 aa11.85□□□□□ -0.51
Nup98-204ENSMUST00000211005 Cfdp1O88271 295 aaKnown RBP11.85□□□□□ -0.51
Nup98-204ENSMUST00000211005 Stk36Q69ZM6 1316 aa11.85□□□□□ -0.51
Nup98-204ENSMUST00000211005 Gnai2P08752 355 aaKnown RBP11.85□□□□□ -0.51
Nup98-204ENSMUST00000211005 HellsQ60848 821 aa11.85□□□□□ -0.51
Nup98-204ENSMUST00000211005 Lrit1Q8K099 624 aa11.85□□□□□ -0.51
Nup98-204ENSMUST00000211005 MypnQ5DTJ9 1315 aa11.84□□□□□ -0.51
Nup98-204ENSMUST00000211005 Ppfibp2O35711 882 aa11.84□□□□□ -0.51
Nup98-204ENSMUST00000211005 Hs1bp3Q3TC93 395 aa11.84□□□□□ -0.51
Nup98-204ENSMUST00000211005 Trim27Q62158 513 aa11.84□□□□□ -0.51
Nup98-204ENSMUST00000211005 Pde4dQ01063 747 aa11.84□□□□□ -0.51
Nup98-204ENSMUST00000211005 Cers3Q1A3B0 383 aa11.84□□□□□ -0.51
Nup98-204ENSMUST00000211005 Anp32aO35381 247 aa11.83□□□□□ -0.52
Nup98-204ENSMUST00000211005 Fam13aQ8BGI4 693 aa11.83□□□□□ -0.52
Nup98-204ENSMUST00000211005 Gigyf1Q99MR1 1044 aaKnown RBP11.83□□□□□ -0.52
Nup98-204ENSMUST00000211005 MetP16056 1379 aa11.83□□□□□ -0.52
Nup98-204ENSMUST00000211005 Zbtb40Q6PCS8 1258 aa11.83□□□□□ -0.52
Nup98-204ENSMUST00000211005 Nip7Q9CXK8 180 aaKnown RBP11.83□□□□□ -0.52
Nup98-204ENSMUST00000211005 Zcrb1Q9CZ96 217 aaKnown RBP11.83□□□□□ -0.52
Nup98-204ENSMUST00000211005 Tlr7P58681 1050 aa11.82□□□□□ -0.52
Nup98-204ENSMUST00000211005 Zbtb1Q91VL9 713 aa11.82□□□□□ -0.52
Nup98-204ENSMUST00000211005 Atl3Q91YH5 541 aa11.82□□□□□ -0.52
Nup98-204ENSMUST00000211005 Lmbr1lQ9D1E5 489 aa11.82□□□□□ -0.52
Nup98-204ENSMUST00000211005 Ubap1lG3UW59 384 aa11.82□□□□□ -0.52
Nup98-204ENSMUST00000211005 EspnQ9ET47 871 aa11.82□□□□□ -0.52
Nup98-204ENSMUST00000211005 Miga2Q8BK03 593 aa11.81□□□□□ -0.52
Nup98-204ENSMUST00000211005 Afg3l2Q8JZQ2 802 aaKnown RBP11.81□□□□□ -0.52
Nup98-204ENSMUST00000211005 Sos2Q02384 1333 aa11.81□□□□□ -0.52
Nup98-204ENSMUST00000211005 HnrnpuQ8VEK3 800 aaKnown RBP11.81□□□□□ -0.52
Nup98-204ENSMUST00000211005 Bicdl1A0JNT9 577 aa11.8□□□□□ -0.52
Nup98-204ENSMUST00000211005 SkilQ60665 675 aa11.8□□□□□ -0.52
Nup98-204ENSMUST00000211005 Ric1Q69ZJ7 1422 aa11.8□□□□□ -0.52
Nup98-204ENSMUST00000211005 Srgap3Q812A2 1099 aa11.8□□□□□ -0.52
Nup98-204ENSMUST00000211005 Ppp1r42Q8R1Z4 357 aa11.8□□□□□ -0.52
Nup98-204ENSMUST00000211005 Grm8P47743 908 aa11.8□□□□□ -0.52
Nup98-204ENSMUST00000211005 Eif3aP23116 1344 aaKnown RBP11.8□□□□□ -0.52
Nup98-204ENSMUST00000211005 Arhgap33Q80YF9 1305 aa11.8□□□□□ -0.52
Nup98-204ENSMUST00000211005 Atp8b2P98199 1209 aa11.79□□□□□ -0.52
Nup98-204ENSMUST00000211005 Slfnl1Q8BHW9 410 aa11.79□□□□□ -0.52
Nup98-204ENSMUST00000211005 C4bP01029 1738 aa11.79□□□□□ -0.52
Nup98-204ENSMUST00000211005 NmiO35309 314 aa11.79□□□□□ -0.52
Nup98-204ENSMUST00000211005 Cwc27Q3TKY6 469 aa11.79□□□□□ -0.52
Nup98-204ENSMUST00000211005 Wwc1Q5SXA9 1104 aa11.79□□□□□ -0.52
Nup98-204ENSMUST00000211005 Ddx58Q6Q899 926 aa11.79□□□□□ -0.52
Nup98-204ENSMUST00000211005 Ripor2Q80U16 1078 aa11.79□□□□□ -0.52
Nup98-204ENSMUST00000211005 Pnmal2G3X9N3 661 aa11.79□□□□□ -0.52
Nup98-204ENSMUST00000211005 Fkbp5Q64378 456 aa11.79□□□□□ -0.52
Nup98-204ENSMUST00000211005 Liat1Q810M6 228 aa11.79□□□□□ -0.52
Nup98-204ENSMUST00000211005 Kiaa0319lQ8K135 1048 aa11.79□□□□□ -0.52
Nup98-204ENSMUST00000211005 DiexfQ8BTT6 772 aaKnown RBP11.78□□□□□ -0.52
Nup98-204ENSMUST00000211005 CarsQ9ER72 831 aaKnown RBP11.78□□□□□ -0.52
Nup98-204ENSMUST00000211005 Ltb4r2Q9JJL9 360 aa11.78□□□□□ -0.52
Nup98-204ENSMUST00000211005 Ier5O89113 308 aa11.78□□□□□ -0.52
Nup98-204ENSMUST00000211005 Adam1aQ60813 791 aa11.78□□□□□ -0.52
Nup98-204ENSMUST00000211005 Tgfb1i1Q62219 461 aa11.78□□□□□ -0.52
Nup98-204ENSMUST00000211005 Arap2Q8BZ05 1703 aa11.78□□□□□ -0.52
Nup98-204ENSMUST00000211005 Sugp2Q8CH09 1067 aa11.78□□□□□ -0.52
Nup98-204ENSMUST00000211005 AK157302I3ITR1 129 aa11.77□□□□□ -0.52
Nup98-204ENSMUST00000211005 Ppp6r1Q7TSI3 856 aa11.77□□□□□ -0.52
Nup98-204ENSMUST00000211005 Isca1Q9D924 129 aa11.77□□□□□ -0.52
Nup98-204ENSMUST00000211005 Ssc5dQ8BV57 1371 aa11.77□□□□□ -0.52
Nup98-204ENSMUST00000211005 Soga3Q6NZL0 945 aa11.77□□□□□ -0.52
Nup98-204ENSMUST00000211005 Mrc1Q61830 1456 aa11.77□□□□□ -0.53
Nup98-204ENSMUST00000211005 Lama4P97927 1816 aa11.77□□□□□ -0.53
Nup98-204ENSMUST00000211005 LifrP42703 1092 aa11.77□□□□□ -0.53
Nup98-204ENSMUST00000211005 GalcP54818 684 aa11.77□□□□□ -0.53
Nup98-204ENSMUST00000211005 FanclQ9CR14 375 aa11.77□□□□□ -0.53
Nup98-204ENSMUST00000211005 Mum1Q6DID5 682 aa11.77□□□□□ -0.53
Nup98-204ENSMUST00000211005 Mmp8O70138 465 aa11.76□□□□□ -0.53
Nup98-204ENSMUST00000211005 Ankib1Q6ZPS6 1085 aa11.76□□□□□ -0.53
Nup98-204ENSMUST00000211005 Q8BT18 775 aa11.76□□□□□ -0.53
Nup98-204ENSMUST00000211005 Smarca5Q91ZW3 1051 aaKnown RBP11.76□□□□□ -0.53
Nup98-204ENSMUST00000211005 Sart3Q9JLI8 962 aaKnown RBP11.76□□□□□ -0.53
Nup98-204ENSMUST00000211005 Ankrd31A0A140LI88 1765 aa11.76□□□□□ -0.53
Nup98-204ENSMUST00000211005 ScaperF8VQ70 1398 aaKnown RBP11.76□□□□□ -0.53
Nup98-204ENSMUST00000211005 Prr5lA2AVJ5 370 aa11.76□□□□□ -0.53
Nup98-204ENSMUST00000211005 Brd1E9PZ26 1189 aaKnown RBP11.76□□□□□ -0.53
Nup98-204ENSMUST00000211005 Smarcc1P97496 1104 aa11.76□□□□□ -0.53
Nup98-204ENSMUST00000211005 Kiaa0319Q5SZV5 1081 aa11.76□□□□□ -0.53
Nup98-204ENSMUST00000211005 Eif4g2Q62448 906 aaKnown RBP11.76□□□□□ -0.53
Nup98-204ENSMUST00000211005 Nphp1Q9QY53 687 aa11.76□□□□□ -0.53
Nup98-204ENSMUST00000211005 Casz1Q9CWL2 1761 aa11.76□□□□□ -0.53
Nup98-204ENSMUST00000211005 Gnl3lQ6PGG6 577 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms