RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Phf23Q8BSN5 401 aa9.34□□□□□ -0.91
Usp40-204ENSMUST00000187758 BcorQ8CGN4 1759 aa9.34□□□□□ -0.91
Usp40-204ENSMUST00000187758 Lrp6O88572 1613 aa9.34□□□□□ -0.91
Usp40-204ENSMUST00000187758 Fer1l6E0CZ42 1862 aa9.34□□□□□ -0.91
Usp40-204ENSMUST00000187758 Eif4g2Q62448 906 aaKnown RBP9.34□□□□□ -0.91
Usp40-204ENSMUST00000187758 Bend3Q6PAL0 825 aa9.34□□□□□ -0.91
Usp40-204ENSMUST00000187758 Dcaf5Q80T85 946 aa9.34□□□□□ -0.91
Usp40-204ENSMUST00000187758 Nhsl1Q8CAF4 1587 aa9.34□□□□□ -0.91
Usp40-204ENSMUST00000187758 Map3k13Q1HKZ5 959 aa9.34□□□□□ -0.91
Usp40-204ENSMUST00000187758 Ccdc27Q3V036 639 aa9.34□□□□□ -0.91
Usp40-204ENSMUST00000187758 Trim27Q62158 513 aa9.34□□□□□ -0.91
Usp40-204ENSMUST00000187758 Stk36Q69ZM6 1316 aa9.34□□□□□ -0.91
Usp40-204ENSMUST00000187758 PappaQ8R4K8 1624 aa9.33□□□□□ -0.92
Usp40-204ENSMUST00000187758 Gm12185Q5NCB2 835 aa9.33□□□□□ -0.92
Usp40-204ENSMUST00000187758 Mylk2Q8VCR8 613 aa9.33□□□□□ -0.92
Usp40-204ENSMUST00000187758 Tiam2Q6ZPF3 1715 aa9.33□□□□□ -0.92
Usp40-204ENSMUST00000187758 Map7O88735 730 aa9.33□□□□□ -0.92
Usp40-204ENSMUST00000187758 Fam13aQ8BGI4 693 aa9.33□□□□□ -0.92
Usp40-204ENSMUST00000187758 Trim52Q8CDV4 233 aa9.33□□□□□ -0.92
Usp40-204ENSMUST00000187758 Tceal9Q9DD24 104 aa9.33□□□□□ -0.92
Usp40-204ENSMUST00000187758 Ttll7A4Q9F0 912 aa9.33□□□□□ -0.92
Usp40-204ENSMUST00000187758 HellsQ60848 821 aa9.33□□□□□ -0.92
Usp40-204ENSMUST00000187758 Cgnl1Q6AW69 1298 aa9.32□□□□□ -0.92
Usp40-204ENSMUST00000187758 Srgap3Q812A2 1099 aa9.32□□□□□ -0.92
Usp40-204ENSMUST00000187758 Tnrc6cQ3UHC0 1690 aaKnown RBP9.32□□□□□ -0.92
Usp40-204ENSMUST00000187758 ScaperF8VQ70 1398 aaKnown RBP9.32□□□□□ -0.92
Usp40-204ENSMUST00000187758 Gnl3lQ6PGG6 577 aaKnown RBP9.32□□□□□ -0.92
Usp40-204ENSMUST00000187758 Bsdc1Q80Y55 427 aa9.32□□□□□ -0.92
Usp40-204ENSMUST00000187758 Taok3Q8BYC6 898 aa9.32□□□□□ -0.92
Usp40-204ENSMUST00000187758 Cwc27Q3TKY6 469 aa9.32□□□□□ -0.92
Usp40-204ENSMUST00000187758 Cetn4Q8K4K1 168 aa9.32□□□□□ -0.92
Usp40-204ENSMUST00000187758 CarsQ9ER72 831 aaKnown RBP9.32□□□□□ -0.92
Usp40-204ENSMUST00000187758 Syde2E9PUP1 1314 aa9.32□□□□□ -0.92
Usp40-204ENSMUST00000187758 Tjp1P39447 1745 aaKnown RBP9.31□□□□□ -0.92
Usp40-204ENSMUST00000187758 Trim30dE9PWL0 497 aa9.31□□□□□ -0.92
Usp40-204ENSMUST00000187758 Mum1Q6DID5 682 aa9.31□□□□□ -0.92
Usp40-204ENSMUST00000187758 Ddx58Q6Q899 926 aa9.31□□□□□ -0.92
Usp40-204ENSMUST00000187758 Ppp1r42Q8R1Z4 357 aa9.31□□□□□ -0.92
Usp40-204ENSMUST00000187758 4930567H17RikQ3V0K5 233 aa9.31□□□□□ -0.92
Usp40-204ENSMUST00000187758 Ppp2r3aB2RXC8 1150 aa9.31□□□□□ -0.92
Usp40-204ENSMUST00000187758 Igfbp6P47880 238 aa9.31□□□□□ -0.92
Usp40-204ENSMUST00000187758 Slc4a10Q5DTL9 1118 aa9.31□□□□□ -0.92
Usp40-204ENSMUST00000187758 Clcn1Q64347 994 aa9.31□□□□□ -0.92
Usp40-204ENSMUST00000187758 Fkbp5Q64378 456 aa9.31□□□□□ -0.92
Usp40-204ENSMUST00000187758 Nip7Q9CXK8 180 aaKnown RBP9.31□□□□□ -0.92
Usp40-204ENSMUST00000187758 Nphp1Q9QY53 687 aa9.31□□□□□ -0.92
Usp40-204ENSMUST00000187758 Mast2Q60592 1734 aa9.31□□□□□ -0.92
Usp40-204ENSMUST00000187758 Grm8P47743 908 aa9.31□□□□□ -0.92
Usp40-204ENSMUST00000187758 Atp8b2P98199 1209 aa9.31□□□□□ -0.92
Usp40-204ENSMUST00000187758 Lmbr1lQ9D1E5 489 aa9.31□□□□□ -0.92
Usp40-204ENSMUST00000187758 Hspa2P17156 633 aa9.3□□□□□ -0.92
Usp40-204ENSMUST00000187758 LifrP42703 1092 aa9.3□□□□□ -0.92
Usp40-204ENSMUST00000187758 Fnbp4Q6ZQ03 1031 aa9.3□□□□□ -0.92
Usp40-204ENSMUST00000187758 Q8BT18 775 aa9.3□□□□□ -0.92
Usp40-204ENSMUST00000187758 KnstrnQ9D9Z1 312 aaKnown RBP9.3□□□□□ -0.92
Usp40-204ENSMUST00000187758 Ubap1lG3UW59 384 aa9.3□□□□□ -0.92
Usp40-204ENSMUST00000187758 Irx3P81067 507 aa9.3□□□□□ -0.92
Usp40-204ENSMUST00000187758 Zbtb40Q6PCS8 1258 aa9.3□□□□□ -0.92
Usp40-204ENSMUST00000187758 Rps6ka4Q9Z2B9 773 aa9.3□□□□□ -0.92
Usp40-204ENSMUST00000187758 Ccdc146E9Q9F7 977 aa9.29□□□□□ -0.92
Usp40-204ENSMUST00000187758 Nav1Q8CH77 1875 aa9.29□□□□□ -0.92
Usp40-204ENSMUST00000187758 Bicdl1A0JNT9 577 aa9.29□□□□□ -0.92
Usp40-204ENSMUST00000187758 Soga3Q6NZL0 945 aa9.29□□□□□ -0.92
Usp40-204ENSMUST00000187758 Ppm1mQ8BU27 406 aa9.29□□□□□ -0.92
Usp40-204ENSMUST00000187758 Gigyf1Q99MR1 1044 aaKnown RBP9.29□□□□□ -0.92
Usp40-204ENSMUST00000187758 Gcc1Q9D4H2 778 aa9.29□□□□□ -0.92
Usp40-204ENSMUST00000187758 Rapgef4Q9EQZ6 1011 aa9.29□□□□□ -0.92
Usp40-204ENSMUST00000187758 Liat1Q810M6 228 aa9.29□□□□□ -0.92
Usp40-204ENSMUST00000187758 Stard3nlQ9DCI3 235 aa9.29□□□□□ -0.92
Usp40-204ENSMUST00000187758 Ppfibp2O35711 882 aa9.28□□□□□ -0.92
Usp40-204ENSMUST00000187758 Ier5O89113 308 aa9.28□□□□□ -0.92
Usp40-204ENSMUST00000187758 Ankib1Q6ZPS6 1085 aa9.28□□□□□ -0.92
Usp40-204ENSMUST00000187758 Zcrb1Q9CZ96 217 aaKnown RBP9.28□□□□□ -0.92
Usp40-204ENSMUST00000187758 Brd1E9PZ26 1189 aaKnown RBP9.28□□□□□ -0.92
Usp40-204ENSMUST00000187758 Hsp90aa1P07901 733 aaKnown RBP9.28□□□□□ -0.92
Usp40-204ENSMUST00000187758 Kif18aQ91WD7 886 aa9.28□□□□□ -0.92
Usp40-204ENSMUST00000187758 MypnQ5DTJ9 1315 aa9.28□□□□□ -0.92
Usp40-204ENSMUST00000187758 GakQ99KY4 1305 aa9.28□□□□□ -0.92
Usp40-204ENSMUST00000187758 Tlr7P58681 1050 aa9.28□□□□□ -0.92
Usp40-204ENSMUST00000187758 Aldh8a1Q8BH00 487 aa9.28□□□□□ -0.92
Usp40-204ENSMUST00000187758 Nlrp3Q8R4B8 1033 aa9.28□□□□□ -0.92
Usp40-204ENSMUST00000187758 Smarca5Q91ZW3 1051 aaKnown RBP9.28□□□□□ -0.92
Usp40-204ENSMUST00000187758 FanclQ9CR14 375 aa9.28□□□□□ -0.92
Usp40-204ENSMUST00000187758 Ltbp1Q8CG19 1712 aa9.27□□□□□ -0.92
Usp40-204ENSMUST00000187758 Myd88P22366 296 aa9.27□□□□□ -0.92
Usp40-204ENSMUST00000187758 Mcm2P97310 904 aa9.27□□□□□ -0.92
Usp40-204ENSMUST00000187758 Miga2Q8BK03 593 aa9.27□□□□□ -0.92
Usp40-204ENSMUST00000187758 MetP16056 1379 aa9.27□□□□□ -0.93
Usp40-204ENSMUST00000187758 Mmp8O70138 465 aa9.27□□□□□ -0.93
Usp40-204ENSMUST00000187758 Zbtb1Q91VL9 713 aa9.27□□□□□ -0.93
Usp40-204ENSMUST00000187758 Cwc25Q9DBF7 416 aa9.27□□□□□ -0.93
Usp40-204ENSMUST00000187758 NmiO35309 314 aa9.27□□□□□ -0.93
Usp40-204ENSMUST00000187758 Gtf3c3Q3TMP1 882 aa9.27□□□□□ -0.93
Usp40-204ENSMUST00000187758 Phlpp2Q8BXA7 1320 aa9.27□□□□□ -0.93
Usp40-204ENSMUST00000187758 4930523C07RikE9Q2T4 99 aa9.26□□□□□ -0.93
Usp40-204ENSMUST00000187758 Sugp2Q8CH09 1067 aa9.26□□□□□ -0.93
Usp40-204ENSMUST00000187758 Smarcc1P97496 1104 aa9.26□□□□□ -0.93
Usp40-204ENSMUST00000187758 Gnat3Q3V3I2 354 aa9.26□□□□□ -0.93
Usp40-204ENSMUST00000187758 Smc4Q8CG47 1286 aa9.26□□□□□ -0.93
Usp40-204ENSMUST00000187758 Shank3Q4ACU6 1730 aa9.26□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 99 ms