RNA–Protein interactions for RNA: ENSMUST00000187727.1

Gm28578-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28578, Length 2,698 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28578-201ENSMUST00000187727 Tceal9Q9DD24 104 aa15□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Ppp1r42Q8R1Z4 357 aa14.99□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Slc5a4bQ91ZP4 660 aa14.99□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Shank3Q4ACU6 1730 aa14.99□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Hspa1lP16627 641 aa14.99□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Srgap3Q812A2 1099 aa14.99□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Ddx58Q6Q899 926 aa14.98□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Emilin2Q8K482 1074 aa14.98□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Ric1Q69ZJ7 1422 aa14.98□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Ddx60E9PZQ1 1711 aa14.98□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Mcmdc2E9Q956 681 aa14.98□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Ankrd23Q812A3 306 aa14.98□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Akap11E9Q777 1895 aa14.97□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Ier5O89113 308 aa14.97□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Mphosph10Q810V0 681 aaKnown RBP14.97□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Anapc15-psA0A140T8L6 141 aa14.97□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Exoc6bA6H5Z3 810 aa14.97□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Pde4dQ01063 747 aa14.97□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Exoc5Q3TPX4 708 aa14.97□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Cfdp1O88271 295 aaKnown RBP14.96□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Zap70P43404 618 aa14.96□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Prkab2Q6PAM0 271 aa14.96□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Bicc1Q99MQ1 977 aaKnown RBP14.96□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Fer1l6E0CZ42 1862 aa14.96□□□□□ -0.01
Gm28578-201ENSMUST00000187727 Grm8P47743 908 aa14.96□□□□□ -0.02
Gm28578-201ENSMUST00000187727 VgfQ0VGU4 617 aa14.96□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Irx6Q9ER75 438 aa14.96□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Atg4a-psA0A0G2JFS9 396 aa14.95□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Prr29B1ARI9 187 aa14.95□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Atg4aQ8C9S8 396 aa14.95□□□□□ -0.02
Gm28578-201ENSMUST00000187727 FanclQ9CR14 375 aa14.95□□□□□ -0.02
Gm28578-201ENSMUST00000187727 PigbQ9JJQ0 542 aa14.95□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Nwd2Q6P5U7 1742 aa14.95□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Mrc1Q61830 1456 aa14.95□□□□□ -0.02
Gm28578-201ENSMUST00000187727 AbraQ8BUZ1 375 aa14.95□□□□□ -0.02
Gm28578-201ENSMUST00000187727 ApobrQ8VBT6 942 aa14.95□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Noc3lQ8VI84 807 aaKnown RBP14.95□□□□□ -0.02
Gm28578-201ENSMUST00000187727 CenppQ9CZ92 286 aa14.95□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Bcl2l13P59017 434 aa14.94□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Ccnl1Q52KE7 532 aaKnown RBP14.94□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Zbtb40Q6PCS8 1258 aa14.94□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Cog6Q8R3I3 657 aa14.94□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Cyp46a1Q9WVK8 500 aa14.94□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Nav1Q8CH77 1875 aa14.94□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Cct4P80315 539 aaKnown RBP14.94□□□□□ -0.02
Gm28578-201ENSMUST00000187727 4930567H17RikQ3V0K5 233 aa14.94□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Ccdc129Q14B48 1034 aa14.93□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Cwc27Q3TKY6 469 aa14.93□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Gnl3lQ6PGG6 577 aaKnown RBP14.93□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Hdac6Q9Z2V5 1149 aa14.93□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Kndc1Q0KK55 1742 aa14.93□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Cacna1sQ02789 1880 aa14.93□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Jmjd4Q8BFT6 427 aa14.92□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Ehd4Q9EQP2 541 aa14.92□□□□□ -0.02
Gm28578-201ENSMUST00000187727 MetP16056 1379 aa14.92□□□□□ -0.02
Gm28578-201ENSMUST00000187727 MypnQ5DTJ9 1315 aa14.92□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Pnmal2G3X9N3 661 aa14.92□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Gm12185Q5NCB2 835 aa14.92□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Smg7Q5RJH6 1138 aaKnown RBP14.92□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Zkscan2G3X952 960 aa14.91□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Kiaa0232Q80U59 1396 aaKnown RBP14.91□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Rabep1O35551 862 aa14.91□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Nkx1-2P42580 305 aa14.91□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Abcc4E9Q236 1325 aa14.91□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Hsp90ab1P11499 724 aaKnown RBP14.9□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Sipa1l3G3X9J0 1776 aa14.9□□□□□ -0.02
Gm28578-201ENSMUST00000187727 InhbeO08717 350 aa14.9□□□□□ -0.02
Gm28578-201ENSMUST00000187727 Ddb1Q3U1J4 1140 aaKnown RBP14.89□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Ripor2Q80U16 1078 aa14.89□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Rnf123Q5XPI3 1314 aa14.89□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Pde3bQ61409 1100 aa14.89□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Gigyf1Q99MR1 1044 aaKnown RBP14.89□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Casz1Q9CWL2 1761 aa14.89□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Syde2E9PUP1 1314 aa14.89□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Ttll7A4Q9F0 912 aa14.89□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Ccdc146E9Q9F7 977 aa14.89□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Dnai1Q8C0M8 701 aa14.89□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Lmbr1lQ9D1E5 489 aa14.89□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Sos2Q02384 1333 aa14.88□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Nlrp9bQ66X22 1003 aa14.88□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Igfbp6P47880 238 aa14.88□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Fkbp5Q64378 456 aa14.88□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Mast2Q60592 1734 aa14.87□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Tlr7P58681 1050 aa14.87□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Gnat3Q3V3I2 354 aa14.87□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Ppp1r9bQ6R891 817 aaKnown RBP14.87□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Tmem87bQ8BKU8 555 aa14.87□□□□□ -0.03
Gm28578-201ENSMUST00000187727 InsrrQ9WTL4 1300 aa14.87□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Tbc1d9Q3UYK3 1264 aa14.87□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Dcaf5Q80T85 946 aa14.87□□□□□ -0.03
Gm28578-201ENSMUST00000187727 AK157302I3ITR1 129 aa14.86□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Slc39a6Q8C145 765 aa14.86□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Cap2Q9CYT6 476 aa14.86□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Isca1Q9D924 129 aa14.86□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Tbc1d4Q8BYJ6 1307 aa14.86□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Nhsl1Q8CAF4 1587 aa14.86□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Smarca5Q91ZW3 1051 aaKnown RBP14.86□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Stard3nlQ9DCI3 235 aa14.86□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Rps6ka4Q9Z2B9 773 aa14.86□□□□□ -0.03
Gm28578-201ENSMUST00000187727 Rbm27Q5SFM8 1060 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms