RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Cpa2Q504N0 417 aa13.69□□□□□ -0.22
Lig1-211ENSMUST00000177588 Anp32cQ64G17 123 aa13.69□□□□□ -0.22
Lig1-211ENSMUST00000177588 Chd1lQ9CXF7 900 aa13.69□□□□□ -0.22
Lig1-211ENSMUST00000177588 Kcna6Q61923 529 aa13.69□□□□□ -0.22
Lig1-211ENSMUST00000177588 Tbc1d30Q69ZT9 766 aa13.68□□□□□ -0.22
Lig1-211ENSMUST00000177588 Camta1A2A891 1682 aa13.68□□□□□ -0.22
Lig1-211ENSMUST00000177588 Hsp90b1P08113 802 aaKnown RBP13.67□□□□□ -0.22
Lig1-211ENSMUST00000177588 Ncoa4Q5U4H9 625 aa13.67□□□□□ -0.22
Lig1-211ENSMUST00000177588 Tshz3Q8CGV9 1081 aa13.67□□□□□ -0.22
Lig1-211ENSMUST00000177588 Fam83gQ5SWY7 812 aa13.67□□□□□ -0.22
Lig1-211ENSMUST00000177588 Ano8Q6PB70 1060 aa13.67□□□□□ -0.22
Lig1-211ENSMUST00000177588 Ccdc7Q9D541 371 aa13.67□□□□□ -0.22
Lig1-211ENSMUST00000177588 Msh6P54276 1358 aaKnown RBP13.67□□□□□ -0.22
Lig1-211ENSMUST00000177588 NcapgE9PWG6 1004 aa13.67□□□□□ -0.22
Lig1-211ENSMUST00000177588 Smarce1O54941 411 aaKnown RBP13.67□□□□□ -0.22
Lig1-211ENSMUST00000177588 Unc13bQ9Z1N9 1602 aa13.67□□□□□ -0.22
Lig1-211ENSMUST00000177588 Atp8b2P98199 1209 aa13.66□□□□□ -0.22
Lig1-211ENSMUST00000177588 Dnajc10Q9DC23 793 aa13.66□□□□□ -0.22
Lig1-211ENSMUST00000177588 Parp14Q2EMV9 1817 aa13.66□□□□□ -0.22
Lig1-211ENSMUST00000177588 Utp18Q5SSI6 552 aaKnown RBP13.66□□□□□ -0.22
Lig1-211ENSMUST00000177588 Amigo3Q8C2S7 508 aa13.66□□□□□ -0.22
Lig1-211ENSMUST00000177588 Noc3lQ8VI84 807 aaKnown RBP13.66□□□□□ -0.22
Lig1-211ENSMUST00000177588 Kcnh5Q920E3 988 aa13.66□□□□□ -0.22
Lig1-211ENSMUST00000177588 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.65□□□□□ -0.22
Lig1-211ENSMUST00000177588 KinQ8K339 391 aa13.65□□□□□ -0.22
Lig1-211ENSMUST00000177588 Snap23O09044 210 aa13.65□□□□□ -0.22
Lig1-211ENSMUST00000177588 Ddx19aQ61655 478 aaKnown RBP13.65□□□□□ -0.22
Lig1-211ENSMUST00000177588 Pdzrn3Q69ZS0 1063 aa13.65□□□□□ -0.22
Lig1-211ENSMUST00000177588 Dzip1Q8BMD2 852 aa13.65□□□□□ -0.22
Lig1-211ENSMUST00000177588 Olfml1Q8BSH2 233 aa13.65□□□□□ -0.22
Lig1-211ENSMUST00000177588 Pmfbp1Q9WVQ0 1022 aa13.65□□□□□ -0.22
Lig1-211ENSMUST00000177588 Elmsan1E9Q2I4 1089 aaKnown RBP13.65□□□□□ -0.23
Lig1-211ENSMUST00000177588 Strn4P58404 760 aa13.65□□□□□ -0.23
Lig1-211ENSMUST00000177588 Ccar2Q8VDP4 922 aaKnown RBP13.65□□□□□ -0.23
Lig1-211ENSMUST00000177588 Igsf1Q7TQA1 1317 aa13.64□□□□□ -0.23
Lig1-211ENSMUST00000177588 Ccdc173A0JLY1 547 aa13.64□□□□□ -0.23
Lig1-211ENSMUST00000177588 Fmnl2A2APV2 1086 aa13.64□□□□□ -0.23
Lig1-211ENSMUST00000177588 Tbc1d31Q6NXY1 996 aa13.64□□□□□ -0.23
Lig1-211ENSMUST00000177588 Dixdc1Q80Y83 711 aa13.64□□□□□ -0.23
Lig1-211ENSMUST00000177588 Jakmip1Q8BVL9 626 aa13.64□□□□□ -0.23
Lig1-211ENSMUST00000177588 Rps6ka5Q8C050 863 aa13.64□□□□□ -0.23
Lig1-211ENSMUST00000177588 Tpx2A2APB8 745 aaKnown RBP13.64□□□□□ -0.23
Lig1-211ENSMUST00000177588 Mcmdc2E9Q956 681 aa13.64□□□□□ -0.23
Lig1-211ENSMUST00000177588 Ms4a2P20490 235 aa13.64□□□□□ -0.23
Lig1-211ENSMUST00000177588 Stk36Q69ZM6 1316 aa13.64□□□□□ -0.23
Lig1-211ENSMUST00000177588 Robo1O89026 1612 aa13.63□□□□□ -0.23
Lig1-211ENSMUST00000177588 Bach2P97303 839 aa13.63□□□□□ -0.23
Lig1-211ENSMUST00000177588 Cyb5rlB1AS42 316 aa13.63□□□□□ -0.23
Lig1-211ENSMUST00000177588 Cwc27Q3TKY6 469 aa13.63□□□□□ -0.23
Lig1-211ENSMUST00000177588 Rad17Q6NXW6 688 aa13.63□□□□□ -0.23
Lig1-211ENSMUST00000177588 Lekr1B2RVN1 116 aa13.63□□□□□ -0.23
Lig1-211ENSMUST00000177588 Wdr78E9PYY5 807 aa13.63□□□□□ -0.23
Lig1-211ENSMUST00000177588 Slx4ipQ9D7Y9 413 aa13.63□□□□□ -0.23
Lig1-211ENSMUST00000177588 Fam184aE9PW83 1143 aa13.62□□□□□ -0.23
Lig1-211ENSMUST00000177588 Scaf1Q5U4C3 1256 aaKnown RBP13.62□□□□□ -0.23
Lig1-211ENSMUST00000177588 Nol12Q8BG17 217 aa13.61□□□□□ -0.23
Lig1-211ENSMUST00000177588 Ltbp4Q8K4G1 1666 aa13.61□□□□□ -0.23
Lig1-211ENSMUST00000177588 Hoxa7P02830 229 aa13.61□□□□□ -0.23
Lig1-211ENSMUST00000177588 Unc5clQ6R653 518 aa13.61□□□□□ -0.23
Lig1-211ENSMUST00000177588 Ints3Q7TPD0 1041 aaKnown RBP13.61□□□□□ -0.23
Lig1-211ENSMUST00000177588 Amotl2Q8K371 772 aa13.61□□□□□ -0.23
Lig1-211ENSMUST00000177588 HypkQ9CR41 129 aa13.61□□□□□ -0.23
Lig1-211ENSMUST00000177588 Foxp4Q9DBY0 795 aaKnown RBP13.61□□□□□ -0.23
Lig1-211ENSMUST00000177588 Col18a1P39061 1774 aa13.61□□□□□ -0.23
Lig1-211ENSMUST00000177588 Q3TQI7 289 aaKnown RBP13.61□□□□□ -0.23
Lig1-211ENSMUST00000177588 Wdr93Q402B2 695 aa13.61□□□□□ -0.23
Lig1-211ENSMUST00000177588 Casc1Q6TDU8 730 aa13.61□□□□□ -0.23
Lig1-211ENSMUST00000177588 Hvcn1Q3U2S8 269 aa13.59□□□□□ -0.23
Lig1-211ENSMUST00000177588 Disp3A3KFU9 1347 aa13.59□□□□□ -0.23
Lig1-211ENSMUST00000177588 Rad50P70388 1312 aa13.59□□□□□ -0.23
Lig1-211ENSMUST00000177588 Zfp51Q3U4L8 781 aa13.59□□□□□ -0.23
Lig1-211ENSMUST00000177588 Zfp804bA0A0G2JGH6 1343 aa13.59□□□□□ -0.23
Lig1-211ENSMUST00000177588 Gm21698A0A087WQP8 267 aa13.59□□□□□ -0.23
Lig1-211ENSMUST00000177588 Gm21671G3UY31 267 aa13.59□□□□□ -0.23
Lig1-211ENSMUST00000177588 Adcy5P84309 1262 aa13.59□□□□□ -0.23
Lig1-211ENSMUST00000177588 Ncbp1Q3UYV9 790 aaKnown RBP13.59□□□□□ -0.23
Lig1-211ENSMUST00000177588 Bms1Q6PGF5 1284 aaKnown RBP13.59□□□□□ -0.23
Lig1-211ENSMUST00000177588 Naa30Q8CES0 364 aa13.59□□□□□ -0.23
Lig1-211ENSMUST00000177588 Inpp5bQ8K337 993 aa13.59□□□□□ -0.23
Lig1-211ENSMUST00000177588 Mlh1Q9JK91 760 aa13.59□□□□□ -0.23
Lig1-211ENSMUST00000177588 Mx2Q9WVP9 655 aa13.58□□□□□ -0.24
Lig1-211ENSMUST00000177588 Pnpla7A2AJ88 1352 aa13.58□□□□□ -0.24
Lig1-211ENSMUST00000177588 Brpf1B2RRD7 1212 aa13.58□□□□□ -0.24
Lig1-211ENSMUST00000177588 Gsdma3Q5Y4Y6 464 aa13.58□□□□□ -0.24
Lig1-211ENSMUST00000177588 Atf5O70191 283 aa13.57□□□□□ -0.24
Lig1-211ENSMUST00000177588 Ube2hP62257 183 aa13.57□□□□□ -0.24
Lig1-211ENSMUST00000177588 Gys2Q8VCB3 704 aa13.57□□□□□ -0.24
Lig1-211ENSMUST00000177588 Brinp3Q499E0 766 aa13.57□□□□□ -0.24
Lig1-211ENSMUST00000177588 Samm50Q8BGH2 469 aa13.57□□□□□ -0.24
Lig1-211ENSMUST00000177588 Rufy3Q9D394 469 aa13.57□□□□□ -0.24
Lig1-211ENSMUST00000177588 Stx6Q9JKK1 255 aa13.57□□□□□ -0.24
Lig1-211ENSMUST00000177588 Kif3aP28741 701 aa13.57□□□□□ -0.24
Lig1-211ENSMUST00000177588 Gjb2Q00977 226 aa13.57□□□□□ -0.24
Lig1-211ENSMUST00000177588 Zscan22Q8BGS5 496 aa13.57□□□□□ -0.24
Lig1-211ENSMUST00000177588 DpydQ8CHR6 1025 aa13.57□□□□□ -0.24
Lig1-211ENSMUST00000177588 Pof1bQ8K4L4 587 aa13.57□□□□□ -0.24
Lig1-211ENSMUST00000177588 Grpel1Q99LP6 217 aa13.57□□□□□ -0.24
Lig1-211ENSMUST00000177588 SrrtQ99MR6 875 aaKnown RBP13.57□□□□□ -0.24
Lig1-211ENSMUST00000177588 Med4Q9CQA5 270 aa13.57□□□□□ -0.24
Lig1-211ENSMUST00000177588 Ptgs1P22437 602 aa13.56□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms