RNA–Protein interactions for RNA: ENSMUST00000161455.7

Ctc1-211, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Ctc1, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-211ENSMUST00000161455 Nsd3Q6P2L6 1439 aa12.56□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Jdp2P97875 163 aa12.55□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Fam83gQ5SWY7 812 aa12.55□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Rrp12Q6P5B0 1295 aaKnown RBP12.55□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Snapc4Q8BP86 1333 aa12.55□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Exoc6bA6H5Z3 810 aa12.54□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Cacna1sQ02789 1880 aa12.54□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Abcc12Q80WJ6 1366 aa12.54□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Tnrc6cQ3UHC0 1690 aaKnown RBP12.54□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Kiaa0319lQ8K135 1048 aa12.54□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Gys2Q8VCB3 704 aa12.54□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Plekhh1Q80TI1 1356 aa12.54□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Plekhm2Q80TQ5 1018 aa12.54□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Mphosph10Q810V0 681 aaKnown RBP12.54□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Spef2Q8C9J3 1734 aa12.53□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Vamp4O70480 141 aa12.53□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Slf2Q6P9P0 1278 aa12.53□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Gnl3lQ6PGG6 577 aaKnown RBP12.53□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Foxp4Q9DBY0 795 aaKnown RBP12.53□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Lekr1B2RVN1 116 aa12.53□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Cfdp1O88271 295 aaKnown RBP12.53□□□□□ -0.4
Ctc1-211ENSMUST00000161455 SympkQ80X82 1284 aa12.53□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Stac3Q8BZ71 360 aa12.53□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Ccdc171E9Q1U1 1324 aa12.53□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Spryd3E9Q9B3 442 aa12.53□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Ankib1Q6ZPS6 1085 aa12.53□□□□□ -0.4
Ctc1-211ENSMUST00000161455 RtcbQ99LF4 505 aaKnown RBP12.53□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Ttc21aQ8C0S4 1314 aa12.53□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Nwd2Q6P5U7 1742 aa12.52□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Cyp2d12Q8BVD2 504 aa12.52□□□□□ -0.4
Ctc1-211ENSMUST00000161455 NgdnQ9DB96 315 aaKnown RBP12.52□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Pnpla7A2AJ88 1352 aa12.52□□□□□ -0.4
Ctc1-211ENSMUST00000161455 Robo1O89026 1612 aa12.52□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Pank1Q8K4K6 548 aa12.52□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Map3k13Q1HKZ5 959 aa12.52□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Gm12185Q5NCB2 835 aa12.52□□□□□ -0.41
Ctc1-211ENSMUST00000161455 BcanQ61361 883 aa12.52□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Zbtb1Q91VL9 713 aa12.52□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Pdia4P08003 638 aaKnown RBP12.51□□□□□ -0.41
Ctc1-211ENSMUST00000161455 L3mbtl2P59178 703 aa12.51□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Dnai1Q8C0M8 701 aa12.51□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Tpm2P58774 284 aa12.51□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Gtpbp6Q3U6U5 514 aa12.51□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Nlrp3Q8R4B8 1033 aa12.51□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Ahnak2E9PYB0 1738 aaKnown RBP12.5□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Ltbp1Q8CG19 1712 aa12.5□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Cers3Q1A3B0 383 aa12.5□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Nup153E9Q3G8 1462 aaKnown RBP12.5□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Crb1Q8VHS2 1405 aa12.5□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Col1a2Q01149 1372 aa12.5□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Adam1aQ60813 791 aa12.5□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Erbb4Q61527 1308 aa12.49□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Mdc1Q5PSV9 1707 aa12.49□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Ezh2Q61188 746 aaKnown RBP12.49□□□□□ -0.41
Ctc1-211ENSMUST00000161455 KarsQ99MN1 595 aaKnown RBP12.49□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Mapk8ip1Q9WVI9 707 aa12.49□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Uhrf1bp1B2KF50 1429 aa12.49□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Erbb3Q61526 1339 aa12.49□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Gm13023A2A8N2 498 aa12.49□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Iqsec3Q3TES0 1195 aa12.49□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Lrrc43Q3V0L5 667 aa12.49□□□□□ -0.41
Ctc1-211ENSMUST00000161455 BbxQ8VBW5 907 aa12.49□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Trim34aQ99PP6 485 aa12.49□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Ifit1bl2Q3U687 466 aa12.48□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Slfnl1Q8BHW9 410 aa12.48□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Tns2Q8CGB6 1400 aa12.48□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Irf9Q61179 399 aa12.48□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Eva1cP58659 440 aa12.48□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Hspa2P17156 633 aa12.47□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Fbxo2Q80UW2 297 aa12.47□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Rbm5Q91YE7 815 aaKnown RBP12.47□□□□□ -0.41
Ctc1-211ENSMUST00000161455 MeiocA2AG06 965 aa12.47□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Pde4bB1AWC9 736 aa12.47□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Aifm3Q3TY86 605 aa12.47□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Map3k2Q61083 619 aa12.47□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Arfgef2A2A5R2 1792 aa12.47□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Ttll7A4Q9F0 912 aa12.47□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Hmgb2P30681 210 aaKnown RBP12.47□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Q3UPC7 1272 aa12.47□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Nol10Q5RJG1 687 aaKnown RBP12.47□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Ankle2Q6P1H6 964 aa12.47□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Fer1l6E0CZ42 1862 aa12.47□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Rgs17Q9QZB0 210 aa12.46□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Atf5O70191 283 aa12.46□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Il4rP16382 810 aa12.46□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Igflr1Q3U4N7 345 aa12.46□□□□□ -0.41
Ctc1-211ENSMUST00000161455 Fkbp5Q64378 456 aa12.46□□□□□ -0.42
Ctc1-211ENSMUST00000161455 Esco1Q69Z69 843 aa12.46□□□□□ -0.42
Ctc1-211ENSMUST00000161455 NppbP40753 121 aa12.45□□□□□ -0.42
Ctc1-211ENSMUST00000161455 HmcesQ8R1M0 353 aaKnown RBP12.45□□□□□ -0.42
Ctc1-211ENSMUST00000161455 Atp1b3P97370 278 aa12.45□□□□□ -0.42
Ctc1-211ENSMUST00000161455 Ttc19Q8CC21 365 aa12.45□□□□□ -0.42
Ctc1-211ENSMUST00000161455 Ccdc6D3YZP9 469 aa12.45□□□□□ -0.42
Ctc1-211ENSMUST00000161455 Ncbp3Q8BZR9 615 aaKnown RBP12.45□□□□□ -0.42
Ctc1-211ENSMUST00000161455 Chmp3Q9CQ10 224 aa12.45□□□□□ -0.42
Ctc1-211ENSMUST00000161455 Adgrb1Q3UHD1 1582 aa12.45□□□□□ -0.42
Ctc1-211ENSMUST00000161455 Apba2P98084 750 aa12.45□□□□□ -0.42
Ctc1-211ENSMUST00000161455 Trim58Q5NCC9 485 aa12.44□□□□□ -0.42
Ctc1-211ENSMUST00000161455 Eif4g2Q62448 906 aaKnown RBP12.44□□□□□ -0.42
Ctc1-211ENSMUST00000161455 Echdc1Q9D9V3 322 aa12.44□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms