RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Erich6bQ9D4S6 220 aa16.09■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Ttc37F8VPK0 1563 aa16.08■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Topbp1Q6ZQF0 1515 aa16.08■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Ints3Q7TPD0 1041 aaKnown RBP16.08■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Ccer1Q9CQL2 403 aa16.08■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Ncbp3Q8BZR9 615 aaKnown RBP16.08■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Mad1l1Q9WTX8 717 aaKnown RBP16.08■□□□□ 0.16
Clcn3-204ENSMUST00000110301 RgmbQ7TQ33 436 aa16.08■□□□□ 0.16
Clcn3-204ENSMUST00000110301 LifrP42703 1092 aa16.07■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Zbtb45Q52KG4 520 aa16.07■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Eno4Q8C042 619 aa16.07■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Ifit1bl2Q3U687 466 aa16.07■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Setd1aE9PYH6 1716 aa16.06■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Chl1P70232 1209 aa16.06■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Agtpbp1Q641K1 1218 aa16.06■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Ier5O89113 308 aa16.05■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Foxp4Q9DBY0 795 aaKnown RBP16.05■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Ncapd2Q8K2Z4 1392 aa16.05■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Rhot2Q8JZN7 620 aa16.05■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Aldh1l2Q8K009 923 aa16.05■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Cyp7a1Q64505 503 aa16.05■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Klf15Q9EPW2 415 aa16.05■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Psma5Q9Z2U1 241 aaKnown RBP16.05■□□□□ 0.16
Clcn3-204ENSMUST00000110301 PtprmP28828 1452 aa16.05■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Mcmdc2E9Q956 681 aa16.04■□□□□ 0.16
Clcn3-204ENSMUST00000110301 NmiO35309 314 aa16.04■□□□□ 0.16
Clcn3-204ENSMUST00000110301 AnlnQ8K298 1121 aaKnown RBP16.04■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Ano8Q6PB70 1060 aa16.04■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Nap1l3Q794H2 544 aa16.04■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Miga2Q8BK03 593 aa16.04■□□□□ 0.16
Clcn3-204ENSMUST00000110301 PigbQ9JJQ0 542 aa16.04■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Tmem2Q5FWI3 1383 aa16.04■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Ppp1r9bQ6R891 817 aaKnown RBP16.04■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Cchcr1Q8K2I2 770 aa16.03■□□□□ 0.16
Clcn3-204ENSMUST00000110301 LratQ9JI60 231 aa16.03■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Larp1Q6ZQ58 1072 aaKnown RBP16.03■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Itsn2Q9Z0R6 1659 aa16.03■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Kdm6aO70546 1401 aa16.02■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Adam1aQ60813 791 aa16.02■□□□□ 0.16
Clcn3-204ENSMUST00000110301 Cnksr1A2A9K7 700 aa16.02■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Cplx2P84086 134 aa16.02■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Smarcc1P97496 1104 aa16.02■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Tmem87bQ8BKU8 555 aa16.02■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Pof1bQ8K4L4 587 aa16.02■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Samd1D3YXK1 519 aa16.01■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Pdia3P27773 505 aaKnown RBP16.01■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Aldh8a1Q8BH00 487 aa16.01■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Golim4Q8BXA1 655 aa16.01■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Ccdc47Q9D024 483 aaKnown RBP16.01■□□□□ 0.15
Clcn3-204ENSMUST00000110301 ScaperF8VQ70 1398 aaKnown RBP16.01■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Fbln2P37889 1221 aa16.01■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Ddx46Q569Z5 1032 aaKnown RBP16.01■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Zkscan1Q8BGS3 561 aaKnown RBP16.01■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Tbc1d7Q9D0K0 293 aa16.01■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Edc3Q8K2D3 508 aaKnown RBP16.01■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Abca17E9PX95 1733 aa16■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Tbc1d32Q3URV1 1296 aa16■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Polr3gQ6NXY9 223 aa16■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Irgm2A0A140LIF8 407 aa16■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Egfem1Q8C088 590 aa16■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Arhgef28P97433 1693 aa16■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Me1P06801 572 aa15.99■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Zbtb3Q91X45 518 aa15.99■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Disp3A3KFU9 1347 aa15.99■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Sf3a1Q8K4Z5 791 aaKnown RBP15.99■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Mmp8O70138 465 aa15.99■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Cpa2Q504N0 417 aa15.99■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Anapc15-psA0A140T8L6 141 aa15.99■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Dnajc2P54103 621 aaKnown RBP15.99■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Kif20aP97329 887 aa15.99■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Gjb2Q00977 226 aa15.99■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Spty2d1Q68FG3 682 aa15.99■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Atf5O70191 283 aa15.98■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Ccp110Q7TSH4 1004 aa15.98■□□□□ 0.15
Clcn3-204ENSMUST00000110301 KdrP35918 1367 aa15.98■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Atg4a-psA0A0G2JFS9 396 aa15.98■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Atg4aQ8C9S8 396 aa15.98■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Mical1Q8VDP3 1048 aa15.98■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Ipo4Q8VI75 1082 aa15.98■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Hspa2P17156 633 aa15.98■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Tomm22Q9CPQ3 142 aa15.98■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Fam213aQ9CYH2 218 aa15.98■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Cdk12Q14AX6 1484 aaKnown RBP15.97■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Cplx1P63040 134 aa15.97■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Prl7d1P04769 244 aa15.97■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Sh3bgrQ9WUZ7 214 aa15.97■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Tceanc2Q8R2M0 207 aa15.96■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Bicd2Q921C5 820 aa15.96■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Erc1Q99MI1 1120 aa15.96■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Gemin5Q8BX17 1502 aaKnown RBP15.96■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Ankrd13dQ6PD24 605 aa15.96■□□□□ 0.15
Clcn3-204ENSMUST00000110301 CenppQ9CZ92 286 aa15.96■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Ttll7A4Q9F0 912 aa15.96■□□□□ 0.15
Clcn3-204ENSMUST00000110301 TnrQ8BYI9 1358 aa15.96■□□□□ 0.15
Clcn3-204ENSMUST00000110301 Emilin2Q8K482 1074 aa15.96■□□□□ 0.15
Clcn3-204ENSMUST00000110301 AdgbG3UZ78 1657 aa15.95■□□□□ 0.14
Clcn3-204ENSMUST00000110301 EvcP57680 1005 aa15.95■□□□□ 0.14
Clcn3-204ENSMUST00000110301 Tlr7P58681 1050 aa15.95■□□□□ 0.14
Clcn3-204ENSMUST00000110301 Tm6sf1P58749 370 aa15.95■□□□□ 0.14
Clcn3-204ENSMUST00000110301 Zc3h12cQ5DTV4 884 aa15.95■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 41.4 ms