RNA–Protein interactions for RNA: ENSMUST00000106118.9

Ebf3-202, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 3,736 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-202ENSMUST00000106118 Exoc6bA6H5Z3 810 aa13.76□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Mum1Q6DID5 682 aa13.76□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Sptbn5F6UCX4 1208 aa13.76□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Asic4Q7TNS7 539 aa13.76□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Anapc15-psA0A140T8L6 141 aa13.76□□□□□ -0.21
Ebf3-202ENSMUST00000106118 SympkQ80X82 1284 aa13.75□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Tns2Q8CGB6 1400 aa13.75□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Zkscan2G3X952 960 aa13.75□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Gimap5Q8BWF2 308 aa13.75□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Flad1Q8R123 492 aa13.75□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Acsbg1Q99PU5 721 aa13.75□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Mmp8O70138 465 aa13.74□□□□□ -0.21
Ebf3-202ENSMUST00000106118 CenppQ9CZ92 286 aa13.74□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Iqsec3Q3TES0 1195 aa13.74□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Map3k2Q61083 619 aa13.74□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Smarca5Q91ZW3 1051 aaKnown RBP13.74□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Abca15E9PWH4 1668 aa13.74□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Bend3Q6PAL0 825 aa13.74□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Zap70P43404 618 aa13.73□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Tbc1d9Q3UYK3 1264 aa13.73□□□□□ -0.21
Ebf3-202ENSMUST00000106118 HellsQ60848 821 aa13.73□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Mcmdc2E9Q956 681 aa13.73□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Slc4a10Q5DTL9 1118 aa13.73□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Tnpo1Q8BFY9 898 aaKnown RBP13.73□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Atg4a-psA0A0G2JFS9 396 aa13.72□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Atg4aQ8C9S8 396 aa13.72□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Cyp2d11P24457 504 aa13.72□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Cers3Q1A3B0 383 aa13.72□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Flt4P35917 1363 aa13.71□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Ier5O89113 308 aa13.71□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Pde3bQ61409 1100 aa13.71□□□□□ -0.21
Ebf3-202ENSMUST00000106118 FocadA2AKG8 1798 aa13.71□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Nkx2-3P97334 362 aa13.71□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Efcab2Q9CQ46 164 aa13.71□□□□□ -0.22
Ebf3-202ENSMUST00000106118 BcorQ8CGN4 1759 aa13.7□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Cct4P80315 539 aaKnown RBP13.7□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Ankle2Q6P1H6 964 aa13.69□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Adcy9P51830 1353 aa13.69□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Tnks1bp1P58871 1720 aa13.69□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Elp1Q7TT37 1333 aaKnown RBP13.69□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Ptpdc1Q6NZK8 747 aa13.69□□□□□ -0.22
Ebf3-202ENSMUST00000106118 GorabQ8BRM2 368 aa13.69□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Q9D2X8 372 aa13.69□□□□□ -0.22
Ebf3-202ENSMUST00000106118 VgfQ0VGU4 617 aa13.68□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Gm10093D3YYI8 482 aa13.68□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Hdac1O09106 482 aaKnown RBP13.68□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Map3k13Q1HKZ5 959 aa13.68□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Ddx54Q8K4L0 874 aaKnown RBP13.68□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Noc3lQ8VI84 807 aaKnown RBP13.68□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Erbb4Q61527 1308 aa13.68□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Pard3Q99NH2 1333 aa13.68□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Grm8P47743 908 aa13.67□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Bicc1Q99MQ1 977 aaKnown RBP13.67□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Prkab2Q6PAM0 271 aa13.67□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Bcar3Q9QZK2 820 aa13.67□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Hsp90b1P08113 802 aaKnown RBP13.67□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Ddx58Q6Q899 926 aa13.67□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Ppip5k2Q6ZQB6 1129 aa13.67□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Pdcl3Q8BVF2 240 aa13.67□□□□□ -0.22
Ebf3-202ENSMUST00000106118 AceP09470 1312 aa13.67□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Hmox1P14901 289 aa13.66□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Larp1Q6ZQ58 1072 aaKnown RBP13.66□□□□□ -0.22
Ebf3-202ENSMUST00000106118 1700010I14RikQ7TPG0 532 aa13.66□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Pdia3P27773 505 aaKnown RBP13.66□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Nucb1Q02819 459 aaKnown RBP13.66□□□□□ -0.22
Ebf3-202ENSMUST00000106118 MccE9PWI3 1003 aa13.66□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Lrrc59Q922Q8 307 aaKnown RBP13.66□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Erc2Q6PH08 957 aa13.65□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Pdia6Q922R8 440 aaKnown RBP13.65□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Bcl11bQ99PV8 884 aa13.65□□□□□ -0.22
Ebf3-202ENSMUST00000106118 Zfp142G5E869 1843 aa13.64□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Smg7Q5RJH6 1138 aaKnown RBP13.64□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Ppp6r3Q922D4 844 aa13.64□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Lmbr1lQ9D1E5 489 aa13.64□□□□□ -0.23
Ebf3-202ENSMUST00000106118 ApobrQ8VBT6 942 aa13.63□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Rfx1P48377 963 aa13.63□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Tnnt2P50752 301 aa13.63□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Gnl3lQ6PGG6 577 aaKnown RBP13.63□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Ginm1Q91WR6 327 aa13.63□□□□□ -0.23
Ebf3-202ENSMUST00000106118 PigbQ9JJQ0 542 aa13.63□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Ubr2Q6WKZ8 1755 aa13.62□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Fkbp5Q64378 456 aa13.62□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Ybx3Q9JKB3 361 aaKnown RBP13.62□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Tlr7P58681 1050 aa13.62□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Trim52Q8CDV4 233 aa13.62□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Tfip11Q9ERA6 838 aaKnown RBP13.62□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Smc4Q8CG47 1286 aa13.62□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Ubap1lG3UW59 384 aa13.61□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Smim5Q8BT42 78 aa13.61□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Stard3nlQ9DCI3 235 aa13.61□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Tom1O88746 492 aa13.61□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Slc39a6Q8C145 765 aa13.61□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Ccnl1Q52KE7 532 aaKnown RBP13.61□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Ppm1mQ8BU27 406 aa13.61□□□□□ -0.23
Ebf3-202ENSMUST00000106118 RestQ8VIG1 1082 aa13.61□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Marf1Q8BJ34 1730 aaKnown RBP13.6□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Kcnh4A2A5F7 1018 aa13.6□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Tmem87bQ8BKU8 555 aa13.6□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Rbm10Q99KG3 930 aaKnown RBP13.6□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Samd1D3YXK1 519 aa13.6□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms