RNA–Protein interactions for RNA: ENSMUST00000076372.4

Sf3b4-201, Transcript of Splicing factor 3B subunit 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b4-201ENSMUST00000076372 Ubap1lG3UW59 384 aa19.43■□□□□ 0.7
Sf3b4-201ENSMUST00000076372 Smc5Q8CG46 1101 aaKnown RBP19.43■□□□□ 0.7
Sf3b4-201ENSMUST00000076372 Mylk2Q8VCR8 613 aa19.43■□□□□ 0.7
Sf3b4-201ENSMUST00000076372 Dbr1Q923B1 550 aa19.43■□□□□ 0.7
Sf3b4-201ENSMUST00000076372 Trim52Q8CDV4 233 aa19.42■□□□□ 0.7
Sf3b4-201ENSMUST00000076372 Map3k13Q1HKZ5 959 aa19.41■□□□□ 0.7
Sf3b4-201ENSMUST00000076372 B4galnt3Q6L8S8 986 aa19.41■□□□□ 0.7
Sf3b4-201ENSMUST00000076372 Rps6ka4Q9Z2B9 773 aa19.41■□□□□ 0.7
Sf3b4-201ENSMUST00000076372 Nolc1E9Q5C9 702 aaKnown RBP19.41■□□□□ 0.7
Sf3b4-201ENSMUST00000076372 Cfdp1O88271 295 aaKnown RBP19.41■□□□□ 0.7
Sf3b4-201ENSMUST00000076372 Lrit1Q8K099 624 aa19.41■□□□□ 0.7
Sf3b4-201ENSMUST00000076372 Ppfibp2O35711 882 aa19.4■□□□□ 0.7
Sf3b4-201ENSMUST00000076372 Ankle2Q6P1H6 964 aa19.39■□□□□ 0.7
Sf3b4-201ENSMUST00000076372 Ppm1mQ8BU27 406 aa19.39■□□□□ 0.7
Sf3b4-201ENSMUST00000076372 Erbb4Q61527 1308 aa19.38■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Tm6sf1P58749 370 aa19.38■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Zcrb1Q9CZ96 217 aaKnown RBP19.38■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Chmp5Q9D7S9 219 aa19.38■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Gnai2P08752 355 aaKnown RBP19.37■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Pde4dQ01063 747 aa19.37■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Nip7Q9CXK8 180 aaKnown RBP19.37■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Miga2Q8BK03 593 aa19.37■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Nav1Q8CH77 1875 aa19.36■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Bicdl1A0JNT9 577 aa19.36■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 HellsQ60848 821 aa19.36■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 MypnQ5DTJ9 1315 aa19.36■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Cers3Q1A3B0 383 aa19.35■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Zbtb1Q91VL9 713 aa19.35■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Gigyf1Q99MR1 1044 aaKnown RBP19.35■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Sugp2Q8CH09 1067 aa19.35■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Lmbr1lQ9D1E5 489 aa19.35■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Trim27Q62158 513 aa19.34■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Zbtb40Q6PCS8 1258 aa19.34■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Fam13aQ8BGI4 693 aa19.34■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Stk36Q69ZM6 1316 aa19.34■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Tlr7P58681 1050 aa19.33■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Afg3l2Q8JZQ2 802 aaKnown RBP19.33■□□□□ 0.69
Sf3b4-201ENSMUST00000076372 Fam71e1A1L3C1 212 aa19.33■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Anp32aO35381 247 aa19.32■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Slfnl1Q8BHW9 410 aa19.32■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Hs1bp3Q3TC93 395 aa19.31■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Q8BT18 775 aa19.31■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 DiexfQ8BTT6 772 aaKnown RBP19.31■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 HnrnpuQ8VEK3 800 aaKnown RBP19.31■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Arhgap33Q80YF9 1305 aa19.31■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 MetP16056 1379 aa19.31■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Kiaa0319lQ8K135 1048 aa19.31■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Atl3Q91YH5 541 aa19.31■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Srgap3Q812A2 1099 aa19.3■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Ppp1r42Q8R1Z4 357 aa19.3■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 EspnQ9ET47 871 aa19.3■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 NmiO35309 314 aa19.29■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Grm8P47743 908 aa19.29■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 GalcP54818 684 aa19.29■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Cwc27Q3TKY6 469 aa19.29■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 SkilQ60665 675 aa19.29■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Adam1aQ60813 791 aa19.29■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Fkbp5Q64378 456 aa19.29■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Ddx58Q6Q899 926 aa19.29■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Sos2Q02384 1333 aa19.29■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Fbln2P37889 1221 aa19.29■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Atp8b2P98199 1209 aa19.29■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Kiaa0319Q5SZV5 1081 aa19.29■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Ppp6r1Q7TSI3 856 aa19.29■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Abca3Q8R420 1704 aa19.28■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Ripor2Q80U16 1078 aa19.28■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Ltb4r2Q9JJL9 360 aa19.28■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Soga3Q6NZL0 945 aa19.27■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Eif3aP23116 1344 aaKnown RBP19.27■□□□□ 0.68
Sf3b4-201ENSMUST00000076372 Smarcc1P97496 1104 aa19.27■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Tgfb1i1Q62219 461 aa19.27■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Ankib1Q6ZPS6 1085 aa19.27■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 CarsQ9ER72 831 aaKnown RBP19.27■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Pnmal2G3X9N3 661 aa19.26■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 AK157302I3ITR1 129 aa19.26■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Wwc1Q5SXA9 1104 aa19.26■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Isca1Q9D924 129 aa19.26■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Kndc1Q0KK55 1742 aa19.26■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Ier5O89113 308 aa19.25■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Strn4P58404 760 aa19.25■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Rapgef4Q9EQZ6 1011 aa19.25■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Prr5lA2AVJ5 370 aa19.25■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Gnl3lQ6PGG6 577 aaKnown RBP19.25■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 FanclQ9CR14 375 aa19.25■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Sart3Q9JLI8 962 aaKnown RBP19.25■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Gm13023A2A8N2 498 aa19.24■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Smarca5Q91ZW3 1051 aaKnown RBP19.24■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Ddx60E9PZQ1 1711 aa19.24■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Myd88P22366 296 aa19.23■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Slc4a10Q5DTL9 1118 aa19.23■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Mum1Q6DID5 682 aa19.23■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Tceal9Q9DD24 104 aa19.23■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Eif4g2Q62448 906 aaKnown RBP19.23■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Nlrp3Q8R4B8 1033 aa19.23■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Nphp1Q9QY53 687 aa19.23■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Mmp8O70138 465 aa19.22■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 LifrP42703 1092 aa19.22■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Liat1Q810M6 228 aa19.22■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Cwc25Q9DBF7 416 aa19.22■□□□□ 0.67
Sf3b4-201ENSMUST00000076372 Ric1Q69ZJ7 1422 aa19.22■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms