RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 EappQ5BU09 281 aa10.86□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Sugp2Q8CH09 1067 aa10.86□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Vps18Q8R307 973 aa10.85□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Nkx1-2P42580 305 aa10.85□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Usp25P57080 1055 aa10.85□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 LyarQ08288 388 aaKnown RBP10.85□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Ccdc172Q810N9 267 aa10.85□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Ccdc150Q8CDI7 1110 aa10.85□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 IncenpQ9WU62 880 aa10.85□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Cfap73J3QPZ5 306 aa10.85□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Map2k1P31938 393 aa10.85□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Zscan29E9Q5B4 869 aa10.85□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Nucb2P81117 420 aa10.85□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 LarsQ8BMJ2 1178 aa10.85□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Neo1P97798 1493 aa10.85□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Cc2d1bQ8BRN9 848 aa10.84□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Erlin1Q91X78 346 aa10.84□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Brms1Q99N20 246 aa10.84□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 SfswapQ3USH5 945 aaKnown RBP10.84□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Bbof1Q3V079 533 aa10.84□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Sdc2P43407 202 aa10.84□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 VeztQ3ZK22 780 aa10.84□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Tmx1Q8VBT0 278 aa10.84□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Ankrd1Q9CR42 319 aa10.84□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Slx4Q6P1D7 1565 aa10.84□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Pde4bB1AWC9 736 aa10.84□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Ccne1Q61457 408 aa10.84□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Nlrp3Q8R4B8 1033 aa10.84□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Mrpl44Q9CY73 333 aaKnown RBP10.84□□□□□ -0.67
Prpf40a-201ENSMUST00000076313 Ccdc155Q80VJ8 648 aa10.83□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Atf7Q8R0S1 413 aa10.83□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Zbtb3Q91X45 518 aa10.83□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Klhdc4Q921I2 584 aa10.83□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Ctr9Q62018 1173 aaKnown RBP10.83□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 FanclQ9CR14 375 aa10.83□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Chd1lQ9CXF7 900 aa10.83□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Gng11P61953 73 aa10.83□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Ncbp1Q3UYV9 790 aaKnown RBP10.83□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 ApobrQ8VBT6 942 aa10.83□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Rfx7F8VPJ6 1459 aa10.83□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Snx13Q6PHS6 957 aa10.83□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Acsbg1Q99PU5 721 aa10.83□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 LlphQ9D945 130 aaKnown RBP10.83□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Bicdl1A0JNT9 577 aa10.82□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Ccdc12Q8R344 166 aaKnown RBP10.82□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Magi1Q6RHR9 1471 aa10.82□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Rad23bP54728 416 aa10.82□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Map3k2Q61083 619 aa10.82□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Tsg101Q61187 391 aa10.82□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Mcm6P97311 821 aa10.82□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Uspl1Q3ULM6 1089 aa10.82□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Hand2Q61039 217 aa10.82□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 NgdnQ9DB96 315 aaKnown RBP10.82□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Bms1Q6PGF5 1284 aaKnown RBP10.82□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Camsap1A2AHC3 1581 aa10.82□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Mtmr3Q8K296 1196 aa10.82□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Baiap2l1Q9DBJ3 514 aa10.82□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 AqrQ8CFQ3 1481 aaKnown RBP10.82□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Serpinb6bO08804 377 aa10.81□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Stat1P42225 749 aa10.81□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Chpf2Q3UU43 768 aa10.81□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Eif3bQ8JZQ9 803 aaKnown RBP10.81□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Ercc3P49135 783 aa10.81□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Q3UJC8 639 aa10.81□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Larp6Q8BN59 492 aa10.81□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Fam135aQ6NS59 1506 aa10.81□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Nfxl1E9Q8I7 918 aaKnown RBP10.81□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 GnpatP98192 678 aa10.81□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Irf9Q61179 399 aa10.81□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Vps37dQ810I0 261 aa10.81□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Ano2Q8CFW1 1002 aa10.81□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Rai14Q9EP71 979 aaKnown RBP10.81□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Ppfia1B2RXQ2 1266 aa10.8□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Ano10Q8BH79 659 aa10.8□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Als2cr12Q8BVM7 383 aa10.8□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Klhl10Q9D5V2 608 aa10.8□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Syt10Q9R0N4 523 aa10.8□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Trim27Q62158 513 aa10.8□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Soga3Q6NZL0 945 aa10.8□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Tceanc2Q8R2M0 207 aa10.8□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Srgap1Q91Z69 1062 aa10.8□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Crocc2F6XLV1 1638 aa10.8□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Skor1Q8BX46 964 aa10.8□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Nap1l5Q9JJF0 156 aa10.8□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Cnga2Q62398 664 aa10.8□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Vps16Q920Q4 839 aa10.8□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Smtnl1Q99LM3 459 aa10.8□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 RalylQ8BTF8 293 aa10.79□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Sil1Q9EPK6 465 aa10.79□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Gjc1P28229 396 aa10.79□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Igf2bp2Q5SF07 592 aaKnown RBP10.79□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Ankrd40Q5SUE8 363 aa10.79□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Pik3c2gO70167 1506 aa10.79□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 RalgapbQ8BQZ4 1484 aa10.79□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Ktn1Q61595 1327 aaKnown RBP10.79□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Zranb1Q7M760 708 aa10.79□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Vps37cQ8R105 352 aa10.79□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Dapk3O54784 448 aa10.79□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Gm10093D3YYI8 482 aa10.79□□□□□ -0.68
Prpf40a-201ENSMUST00000076313 Hdac1O09106 482 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms