RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 NmiO35309 314 aa9.89□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Strn4P58404 760 aa9.89□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Nol8Q3UHX0 1147 aaKnown RBP9.89□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Tbc1d30Q69ZT9 766 aa9.89□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Kif20bQ80WE4 1774 aaKnown RBP9.88□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Cdk12Q14AX6 1484 aaKnown RBP9.88□□□□□ -0.83
Cdc40-201ENSMUST00000044166 CalcaP70160 136 aa9.88□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Ncbp1Q3UYV9 790 aaKnown RBP9.88□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Kcna4Q61423 654 aa9.88□□□□□ -0.83
Cdc40-201ENSMUST00000044166 RbsnQ80Y56 783 aa9.88□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Idi2Q8BFZ6 227 aa9.88□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Adcy5P84309 1262 aa9.88□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Ppm1eQ80TL0 749 aa9.88□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Vps37dQ810I0 261 aa9.88□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Prune1Q8BIW1 454 aa9.88□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Plekhg1F6S200 1446 aa9.88□□□□□ -0.83
Cdc40-201ENSMUST00000044166 NktrP30415 1453 aa9.88□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Cavin1O54724 392 aa9.87□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Gnai2P08752 355 aaKnown RBP9.87□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Ptgs1P22437 602 aa9.87□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Cc2d1aQ8K1A6 943 aa9.87□□□□□ -0.83
Cdc40-201ENSMUST00000044166 SrrtQ99MR6 875 aaKnown RBP9.87□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Ccar2Q8VDP4 922 aaKnown RBP9.87□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Pibf1E9Q6K3 756 aa9.87□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Mmp14P53690 582 aa9.87□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Pcmtd1P59913 357 aa9.87□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Sv2bQ8BG39 683 aa9.87□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Hoxa7P02830 229 aa9.86□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Hoxb7P09024 217 aa9.86□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Utp18Q5SSI6 552 aaKnown RBP9.86□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Ints3Q7TPD0 1041 aaKnown RBP9.86□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Srgap3Q812A2 1099 aa9.86□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Inpp5bQ8K337 993 aa9.86□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Noc3lQ8VI84 807 aaKnown RBP9.86□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Ccdc7Q9D541 371 aa9.86□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Abca14E9Q8F8 1683 aa9.86□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Nol12Q8BG17 217 aa9.86□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Med4Q9CQA5 270 aa9.86□□□□□ -0.83
Cdc40-201ENSMUST00000044166 SetQ9EQU5 289 aaKnown RBP9.86□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Adamts7Q68SA9 1657 aa9.86□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Jakmip1Q8BVL9 626 aa9.86□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Tshz3Q8CGV9 1081 aa9.86□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Ppp1r42Q8R1Z4 357 aa9.86□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Mx2Q9WVP9 655 aa9.86□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Frmpd2A0A140LI67 1392 aa9.85□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Psmd1Q3TXS7 953 aa9.85□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Zfp51Q3U4L8 781 aa9.85□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Pdzrn3Q69ZS0 1063 aa9.85□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Adam1bQ8R534 806 aa9.85□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Irx4Q9QY61 515 aa9.85□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Ube2hP62257 183 aa9.85□□□□□ -0.83
Cdc40-201ENSMUST00000044166 MpripP97434 1024 aa9.85□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Wdr93Q402B2 695 aa9.85□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Utp3Q9JI13 469 aaKnown RBP9.85□□□□□ -0.83
Cdc40-201ENSMUST00000044166 4930407I10RikD3Z5T8 1512 aa9.85□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Samm50Q8BGH2 469 aa9.84□□□□□ -0.83
Cdc40-201ENSMUST00000044166 PdiltQ9DAN1 588 aa9.84□□□□□ -0.83
Cdc40-201ENSMUST00000044166 NpatQ8BMA5 1420 aa9.84□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Mmp8O70138 465 aa9.84□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Gabpb2P81069 414 aa9.84□□□□□ -0.83
Cdc40-201ENSMUST00000044166 AglF8VPN4 1532 aa9.84□□□□□ -0.83
Cdc40-201ENSMUST00000044166 PtprtQ99M80 1454 aa9.84□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Ahdc1Q6PAL7 1594 aaKnown RBP9.84□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Eif4a2P10630 407 aa9.83□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Tpm3P21107 285 aaKnown RBP9.83□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Nucb2P81117 420 aa9.83□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Anp32eP97822 260 aaKnown RBP9.83□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Ggnbp2Q5SV77 696 aa9.83□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Slx4ipQ9D7Y9 413 aa9.83□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Cspp1B2RX88 1205 aa9.83□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Elmsan1E9Q2I4 1089 aaKnown RBP9.83□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Atp8b2P98199 1209 aa9.83□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Prpf38aQ4FK66 312 aaKnown RBP9.83□□□□□ -0.84
Cdc40-201ENSMUST00000044166 TmpoQ61033 693 aaKnown RBP9.83□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Ccdc178Q8CDV0 866 aa9.83□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Rbm42Q91V81 474 aaKnown RBP9.83□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Pmfbp1Q9WVQ0 1022 aa9.83□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Qser1A2BIE1 1698 aa9.83□□□□□ -0.84
Cdc40-201ENSMUST00000044166 MecomP14404 1042 aa9.83□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Trim30aP15533 496 aa9.83□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Tmx1Q8VBT0 278 aa9.83□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Stx6Q9JKK1 255 aa9.83□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Cfap73J3QPZ5 306 aa9.82□□□□□ -0.84
Cdc40-201ENSMUST00000044166 4930519G04RikQ9CPT7 205 aa9.82□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Smc3Q9CW03 1217 aaKnown RBP9.82□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Mmel1Q9JLI3 765 aa9.82□□□□□ -0.84
Cdc40-201ENSMUST00000044166 AdgbG3UZ78 1657 aa9.82□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Nap1l1P28656 391 aaKnown RBP9.82□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Zscan22Q8BGS5 496 aa9.82□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Sf3a1Q8K4Z5 791 aaKnown RBP9.82□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Mcmdc2E9Q956 681 aa9.82□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Cwc27Q3TKY6 469 aa9.82□□□□□ -0.84
Cdc40-201ENSMUST00000044166 PdcQ9QW08 244 aa9.82□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Kif1aP33173 1695 aa9.82□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Ms4a2P20490 235 aa9.81□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Ccdc162pQ0VG85 912 aa9.81□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Naa30Q8CES0 364 aa9.81□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Mcm3P25206 812 aaKnown RBP9.81□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Dip2cE9PWR4 1557 aa9.81□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Tpx2A2APB8 745 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms