RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 NpatQ8BMA5 1420 aa12.09□□□□□ -0.47
Ccdc40-201ENSMUST00000035935 Rasa1E9PYG6 1038 aa12.09□□□□□ -0.47
Ccdc40-201ENSMUST00000035935 Pdia3P27773 505 aaKnown RBP12.09□□□□□ -0.47
Ccdc40-201ENSMUST00000035935 GnpatP98192 678 aa12.09□□□□□ -0.47
Ccdc40-201ENSMUST00000035935 SelenooQ9DBC0 667 aa12.09□□□□□ -0.47
Ccdc40-201ENSMUST00000035935 Mcmdc2E9Q956 681 aa12.09□□□□□ -0.47
Ccdc40-201ENSMUST00000035935 Stim1P70302 685 aa12.08□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Cpa2Q504N0 417 aa12.08□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Ccdc155Q80VJ8 648 aa12.08□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Cep55Q8BT07 462 aa12.08□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 NgdnQ9DB96 315 aaKnown RBP12.08□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Stx6Q9JKK1 255 aa12.08□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Cfap45Q9D9U9 551 aa12.08□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Phldb2Q8K1N2 1249 aa12.08□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Ppp4r3bQ922R5 820 aa12.08□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Lrriq1Q0P5X1 1673 aa12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Scaf11E9PZM7 1456 aaKnown RBP12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Myd88P22366 296 aa12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Dzip1Q8BMD2 852 aa12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Tango6Q8C3S2 1079 aa12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Cwc25Q9DBF7 416 aa12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Kif1bQ60575 1816 aaKnown RBP12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Synj2Q9D2G5 1434 aa12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Ttc41Q692V3 1318 aa12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Kif14L0N7N1 1674 aaKnown RBP12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 PzpQ61838 1495 aa12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Taok2Q6ZQ29 1240 aa12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Pdcl2Q78Y63 240 aa12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Ccdc39Q9D5Y1 937 aa12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Fam83gQ5SWY7 812 aa12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Tmco3Q8BH01 678 aa12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Slu7Q8BHJ9 585 aa12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Rcan3Q9JKK0 239 aa12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Ube2hP62257 183 aa12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Bag1Q60739 355 aa12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Polr3dQ91WD1 398 aa12.07□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Col17a1Q07563 1470 aa12.06□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Unc13aQ4KUS2 1712 aa12.06□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Znf335A2A5K6 1337 aa12.06□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Nucb1Q02819 459 aaKnown RBP12.06□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Cfap69Q8BH53 942 aa12.06□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Sel1lQ9Z2G6 790 aa12.06□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Zap70P43404 618 aa12.06□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Slc7a3P70423 618 aa12.06□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Aplp1Q03157 653 aa12.06□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 4931400O07RikQ9D4M5 137 aa12.06□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Pde4bB1AWC9 736 aa12.06□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 NcapgE9PWG6 1004 aa12.06□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Nap1l2P51860 460 aa12.06□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Tmem266Q8BZB3 538 aa12.06□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Usp54Q8BL06 1588 aaKnown RBP12.06□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Jakmip2D3YXK0 820 aa12.06□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 CenpqQ9CPQ5 267 aa12.06□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Hvcn1Q3U2S8 269 aa12.05□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Paxip1Q6NZQ4 1056 aa12.05□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Bloc1s2Q9CWG9 143 aa12.05□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Tmem67Q8BR76 992 aa12.05□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Prr29B1ARI9 187 aa12.05□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 AU019823E9PUQ3 292 aa12.05□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Lrrfip1Q3UZ39 729 aaKnown RBP12.05□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Ppp4r3aQ6P2K6 820 aa12.05□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Rnf41Q8BH75 317 aa12.05□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Ccdc178Q8CDV0 866 aa12.05□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 GckrQ91X44 587 aa12.05□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Trim11Q99PQ2 467 aa12.05□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Plekhg1F6S200 1446 aa12.05□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Nsd3Q6P2L6 1439 aa12.05□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Pnmal2G3X9N3 661 aa12.05□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Rufy1Q8BIJ7 712 aa12.05□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Znf692Q3U381 531 aa12.04□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Tmem132eQ6IEE6 982 aa12.04□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Ppm1eQ80TL0 749 aa12.04□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Il1rapl2Q9ERS6 686 aa12.04□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Erbb3Q61526 1339 aa12.04□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 NefhP19246 1090 aa12.04□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Znf287Q9EQB9 759 aa12.04□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Ptch1Q61115 1434 aa12.04□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Mbd5B1AYB6 1498 aa12.04□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Grm8P47743 908 aa12.04□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Bms1Q6PGF5 1284 aaKnown RBP12.04□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Otud6bQ8K2H2 294 aa12.04□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Sytl4Q9R0Q1 673 aa12.04□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Myom2Q14BI5 1463 aa12.03□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 NapbP28663 298 aa12.03□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Nphp3Q7TNH6 1325 aa12.03□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Stat1P42225 749 aa12.03□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Cep112Q5PR68 954 aa12.03□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Mtmr3Q8K296 1196 aa12.03□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Mrpl44Q9CY73 333 aaKnown RBP12.03□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Eya1P97767 591 aa12.03□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 LyarQ08288 388 aaKnown RBP12.03□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Ankrd1Q9CR42 319 aa12.03□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Ccdc96Q9CR92 584 aa12.03□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Luc7lQ9CYI4 371 aaKnown RBP12.03□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Stk36Q69ZM6 1316 aa12.03□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Catsper2A2ARP9 588 aa12.02□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Ubap1lG3UW59 384 aa12.02□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 PrkcshO08795 521 aa12.02□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 HmmrQ00547 794 aaKnown RBP12.02□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Ccdc150Q8CDI7 1110 aa12.02□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 88.5 ms