RNA–Protein interactions for RNA: ENSMUST00000035158.15

Trf-201, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trf, Length 2,571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trf-201ENSMUST00000035158 Lmbr1lQ9D1E5 489 aa17.5■□□□□ 0.39
Trf-201ENSMUST00000035158 TefQ9JLC6 301 aa17.5■□□□□ 0.39
Trf-201ENSMUST00000035158 Slit1Q80TR4 1531 aa17.49■□□□□ 0.39
Trf-201ENSMUST00000035158 Ccnl1Q52KE7 532 aaKnown RBP17.49■□□□□ 0.39
Trf-201ENSMUST00000035158 Pard3Q99NH2 1333 aa17.49■□□□□ 0.39
Trf-201ENSMUST00000035158 Ppm1gQ61074 542 aa17.49■□□□□ 0.39
Trf-201ENSMUST00000035158 Cyp46a1Q9WVK8 500 aa17.49■□□□□ 0.39
Trf-201ENSMUST00000035158 Col4a1P02463 1669 aa17.48■□□□□ 0.39
Trf-201ENSMUST00000035158 Plekhd1B2RPU2 505 aa17.48■□□□□ 0.39
Trf-201ENSMUST00000035158 Mmp8O70138 465 aa17.48■□□□□ 0.39
Trf-201ENSMUST00000035158 Atp8b2P98199 1209 aa17.48■□□□□ 0.39
Trf-201ENSMUST00000035158 Adam1aQ60813 791 aa17.48■□□□□ 0.39
Trf-201ENSMUST00000035158 Ier5O89113 308 aa17.48■□□□□ 0.39
Trf-201ENSMUST00000035158 Ggt6Q6PDE7 497 aa17.48■□□□□ 0.39
Trf-201ENSMUST00000035158 Cetn4Q8K4K1 168 aa17.48■□□□□ 0.39
Trf-201ENSMUST00000035158 Myo5bP21271 1818 aa17.48■□□□□ 0.39
Trf-201ENSMUST00000035158 NmiO35309 314 aa17.47■□□□□ 0.39
Trf-201ENSMUST00000035158 Hmox1P14901 289 aa17.47■□□□□ 0.39
Trf-201ENSMUST00000035158 Ets1P27577 440 aa17.47■□□□□ 0.39
Trf-201ENSMUST00000035158 Cap2Q9CYT6 476 aa17.47■□□□□ 0.39
Trf-201ENSMUST00000035158 Q9D2X8 372 aa17.47■□□□□ 0.39
Trf-201ENSMUST00000035158 Abca15E9PWH4 1668 aa17.47■□□□□ 0.39
Trf-201ENSMUST00000035158 Syde2E9PUP1 1314 aa17.46■□□□□ 0.39
Trf-201ENSMUST00000035158 Aldh8a1Q8BH00 487 aa17.46■□□□□ 0.39
Trf-201ENSMUST00000035158 Ppp1r9bQ6R891 817 aaKnown RBP17.45■□□□□ 0.38
Trf-201ENSMUST00000035158 ApobrQ8VBT6 942 aa17.45■□□□□ 0.38
Trf-201ENSMUST00000035158 Rtn4Q99P72 1162 aaKnown RBP17.45■□□□□ 0.38
Trf-201ENSMUST00000035158 Chmp4cQ9D7F7 232 aa17.45■□□□□ 0.38
Trf-201ENSMUST00000035158 Tmem119Q8R138 280 aa17.44■□□□□ 0.38
Trf-201ENSMUST00000035158 ZgpatQ8VDM1 511 aa17.44■□□□□ 0.38
Trf-201ENSMUST00000035158 DccP70211 1447 aa17.44■□□□□ 0.38
Trf-201ENSMUST00000035158 Igflr1Q3U4N7 345 aa17.44■□□□□ 0.38
Trf-201ENSMUST00000035158 Ybx3Q9JKB3 361 aaKnown RBP17.43■□□□□ 0.38
Trf-201ENSMUST00000035158 Flt4P35917 1363 aa17.43■□□□□ 0.38
Trf-201ENSMUST00000035158 Tpx2A2APB8 745 aaKnown RBP17.42■□□□□ 0.38
Trf-201ENSMUST00000035158 Sptbn5F6UCX4 1208 aa17.42■□□□□ 0.38
Trf-201ENSMUST00000035158 Stk36Q69ZM6 1316 aa17.42■□□□□ 0.38
Trf-201ENSMUST00000035158 Slx1bQ8BX32 270 aa17.42■□□□□ 0.38
Trf-201ENSMUST00000035158 Gcc1Q9D4H2 778 aa17.42■□□□□ 0.38
Trf-201ENSMUST00000035158 Stk3Q9JI10 497 aa17.42■□□□□ 0.38
Trf-201ENSMUST00000035158 Bcl9lQ67FY2 1494 aa17.42■□□□□ 0.38
Trf-201ENSMUST00000035158 Rabep1O35551 862 aa17.41■□□□□ 0.38
Trf-201ENSMUST00000035158 Rfx1P48377 963 aa17.41■□□□□ 0.38
Trf-201ENSMUST00000035158 Ptpdc1Q6NZK8 747 aa17.41■□□□□ 0.38
Trf-201ENSMUST00000035158 Hspa1lP16627 641 aa17.41■□□□□ 0.38
Trf-201ENSMUST00000035158 Pdia3P27773 505 aaKnown RBP17.41■□□□□ 0.38
Trf-201ENSMUST00000035158 Ssfa2Q922B9 1252 aa17.41■□□□□ 0.38
Trf-201ENSMUST00000035158 Grm8P47743 908 aa17.4■□□□□ 0.38
Trf-201ENSMUST00000035158 Ppm1mQ8BU27 406 aa17.4■□□□□ 0.38
Trf-201ENSMUST00000035158 Dmrtc1Q9D9R7 182 aa17.4■□□□□ 0.38
Trf-201ENSMUST00000035158 Mcmdc2E9Q956 681 aa17.4■□□□□ 0.38
Trf-201ENSMUST00000035158 Cgnl1Q6AW69 1298 aa17.4■□□□□ 0.38
Trf-201ENSMUST00000035158 Slfnl1Q8BHW9 410 aa17.4■□□□□ 0.38
Trf-201ENSMUST00000035158 LratQ9JI60 231 aa17.4■□□□□ 0.38
Trf-201ENSMUST00000035158 Dhx38Q80X98 1228 aa17.39■□□□□ 0.38
Trf-201ENSMUST00000035158 4930504O13RikQ8C5Z9 145 aa17.39■□□□□ 0.38
Trf-201ENSMUST00000035158 Ppp6r3Q922D4 844 aa17.39■□□□□ 0.38
Trf-201ENSMUST00000035158 Ubap1lG3UW59 384 aa17.39■□□□□ 0.37
Trf-201ENSMUST00000035158 RestQ8VIG1 1082 aa17.39■□□□□ 0.37
Trf-201ENSMUST00000035158 Tnks1bp1P58871 1720 aa17.39■□□□□ 0.37
Trf-201ENSMUST00000035158 AceP09470 1312 aa17.39■□□□□ 0.37
Trf-201ENSMUST00000035158 MypnQ5DTJ9 1315 aa17.39■□□□□ 0.37
Trf-201ENSMUST00000035158 FocadA2AKG8 1798 aa17.39■□□□□ 0.37
Trf-201ENSMUST00000035158 Tom1O88746 492 aa17.38■□□□□ 0.37
Trf-201ENSMUST00000035158 Adora1Q60612 326 aa17.38■□□□□ 0.37
Trf-201ENSMUST00000035158 Soga3Q6NZL0 945 aa17.38■□□□□ 0.37
Trf-201ENSMUST00000035158 Ccdc129Q14B48 1034 aa17.38■□□□□ 0.37
Trf-201ENSMUST00000035158 Nsfl1cQ9CZ44 370 aaKnown RBP17.38■□□□□ 0.37
Trf-201ENSMUST00000035158 Smg7Q5RJH6 1138 aaKnown RBP17.37■□□□□ 0.37
Trf-201ENSMUST00000035158 Tshz3Q8CGV9 1081 aa17.37■□□□□ 0.37
Trf-201ENSMUST00000035158 CenppQ9CZ92 286 aa17.37■□□□□ 0.37
Trf-201ENSMUST00000035158 Gtf3c3Q3TMP1 882 aa17.36■□□□□ 0.37
Trf-201ENSMUST00000035158 EspnlQ3UYR4 1005 aa17.36■□□□□ 0.37
Trf-201ENSMUST00000035158 GpkowQ56A08 488 aa17.36■□□□□ 0.37
Trf-201ENSMUST00000035158 Flad1Q8R123 492 aa17.36■□□□□ 0.37
Trf-201ENSMUST00000035158 Ccdc9Q8VC31 543 aaKnown RBP17.36■□□□□ 0.37
Trf-201ENSMUST00000035158 Bsdc1Q80Y55 427 aa17.36■□□□□ 0.37
Trf-201ENSMUST00000035158 Tceal9Q9DD24 104 aa17.36■□□□□ 0.37
Trf-201ENSMUST00000035158 Catsper2A2ARP9 588 aa17.35■□□□□ 0.37
Trf-201ENSMUST00000035158 Fam84aQ9D650 292 aa17.35■□□□□ 0.37
Trf-201ENSMUST00000035158 Hsp90b1P08113 802 aaKnown RBP17.35■□□□□ 0.37
Trf-201ENSMUST00000035158 Zbtb3Q91X45 518 aa17.35■□□□□ 0.37
Trf-201ENSMUST00000035158 Atg3Q9CPX6 314 aa17.35■□□□□ 0.37
Trf-201ENSMUST00000035158 Akap11E9Q777 1895 aa17.35■□□□□ 0.37
Trf-201ENSMUST00000035158 Fkbp5Q64378 456 aa17.35■□□□□ 0.37
Trf-201ENSMUST00000035158 Nucb1Q02819 459 aaKnown RBP17.34■□□□□ 0.37
Trf-201ENSMUST00000035158 Elp1Q7TT37 1333 aaKnown RBP17.34■□□□□ 0.37
Trf-201ENSMUST00000035158 BcanQ61361 883 aa17.34■□□□□ 0.37
Trf-201ENSMUST00000035158 Ppip5k2Q6ZQB6 1129 aa17.33■□□□□ 0.36
Trf-201ENSMUST00000035158 Sgsm1Q8BPQ7 1093 aa17.33■□□□□ 0.36
Trf-201ENSMUST00000035158 Ankib1Q6ZPS6 1085 aa17.33■□□□□ 0.36
Trf-201ENSMUST00000035158 Tmc1Q8R4P5 757 aa17.33■□□□□ 0.36
Trf-201ENSMUST00000035158 AppP12023 770 aa17.32■□□□□ 0.36
Trf-201ENSMUST00000035158 Neurod6P48986 337 aa17.32■□□□□ 0.36
Trf-201ENSMUST00000035158 Sik1Q60670 779 aa17.32■□□□□ 0.36
Trf-201ENSMUST00000035158 Lrrc59Q922Q8 307 aaKnown RBP17.32■□□□□ 0.36
Trf-201ENSMUST00000035158 Brpf1B2RRD7 1212 aa17.32■□□□□ 0.36
Trf-201ENSMUST00000035158 Mcm2P97310 904 aa17.32■□□□□ 0.36
Trf-201ENSMUST00000035158 Sf3b2Q3UJB0 878 aaKnown RBP17.32■□□□□ 0.36
Trf-201ENSMUST00000035158 Ripor2Q80U16 1078 aa17.32■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms