RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Foxp4Q9DBY0 795 aaKnown RBP12.94□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Atp8b2P98199 1209 aa12.93□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Mphosph10Q810V0 681 aaKnown RBP12.93□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Tmx3Q8BXZ1 456 aa12.93□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Cypt1Q8CH20 168 aa12.93□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 TatQ8QZR1 454 aa12.93□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Col14a1Q80X19 1797 aa12.93□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 NexnQ7TPW1 607 aa12.93□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Nkx2-3P97334 362 aa12.92□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Rbm27Q5SFM8 1060 aaKnown RBP12.92□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Ccdc155Q80VJ8 648 aa12.92□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Fam114a1Q9D281 569 aa12.92□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Sipa1l2Q80TE4 1722 aa12.92□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Brpf1B2RRD7 1212 aa12.92□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 EvcP57680 1005 aa12.92□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Babam1Q3UI43 333 aa12.92□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Gm9992B2RWK3 458 aa12.92□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Pa2g4P50580 394 aaKnown RBP12.92□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Unc93aQ710D3 458 aa12.92□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Ncapd2Q8K2Z4 1392 aa12.91□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Syce3B5KM66 88 aa12.91□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Mlh1Q9JK91 760 aa12.91□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Tmem2Q5FWI3 1383 aa12.91□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Scn7aB1AYL1 1681 aa12.91□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Fyb1O35601 819 aa12.9□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Mknk2Q8CDB0 459 aa12.9□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Dnajc10Q9DC23 793 aa12.9□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 EspnlQ3UYR4 1005 aa12.9□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Edc3Q8K2D3 508 aaKnown RBP12.9□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Filip1lQ6P6L0 1131 aa12.9□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Elp1Q7TT37 1333 aaKnown RBP12.89□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Mcmdc2E9Q956 681 aa12.89□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Btbd11Q6GQW0 1109 aa12.89□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Mum1Q6DID5 682 aa12.89□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Ano8Q6PB70 1060 aa12.89□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Slx4ipQ9D7Y9 413 aa12.89□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Pmfbp1Q9WVQ0 1022 aa12.89□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Nrxn3Q6P9K9 1571 aa12.89□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Ier5O89113 308 aa12.88□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Pof1bQ8K4L4 587 aa12.88□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 MccE9PWI3 1003 aa12.88□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Atf5O70191 283 aa12.88□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Rad17Q6NXW6 688 aa12.88□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Unc5clQ6R653 518 aa12.88□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Naa30Q8CES0 364 aa12.88□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Msh6P54276 1358 aaKnown RBP12.88□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Tgfb1i1Q62219 461 aa12.87□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Arhgap4B1AUY3 965 aa12.87□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Hspa2P17156 633 aa12.87□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Slain2Q8CI08 581 aa12.87□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Ccdc94Q9D6J3 314 aa12.87□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 PtprvP70289 1705 aa12.87□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Unc13bQ9Z1N9 1602 aa12.87□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 1700017N19RikA0A087WPJ1 469 aa12.87□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Brf1Q8CFK2 676 aa12.87□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Fam13bQ8K2H3 851 aa12.87□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Gm10471E9Q1C7 252 aa12.86□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Lmod3E9QA62 571 aa12.86□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 EappQ5BU09 281 aa12.86□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Mrps27Q8BK72 415 aaKnown RBP12.86□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Eif4a1P60843 406 aaKnown RBP12.86□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Ddx17Q501J6 650 aaKnown RBP12.86□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Ncoa4Q5U4H9 625 aa12.86□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Nol11Q8BJW5 723 aaKnown RBP12.86□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 4931400O07RikQ9D4M5 137 aa12.86□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Tceal9Q9DD24 104 aa12.86□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Adgrb1Q3UHD1 1582 aa12.86□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Slit2Q9R1B9 1521 aa12.85□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Vwa3bJ9JI28 736 aa12.85□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Gsdma3Q5Y4Y6 464 aa12.85□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Map3k2Q61083 619 aa12.85□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Tceanc2Q8R2M0 207 aa12.85□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Ets1P27577 440 aa12.85□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Pcmtd1P59913 357 aa12.85□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Pdzrn3Q69ZS0 1063 aa12.85□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Phlpp1Q8CHE4 1687 aa12.85□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 CoilQ5SU73 570 aa12.84□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 LlphQ9D945 130 aaKnown RBP12.84□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Zbtb22Q9Z0G7 638 aa12.84□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Wdr17E9Q271 1322 aa12.84□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 Igsf1Q7TQA1 1317 aa12.84□□□□□ -0.35
Ptcd1-201ENSMUST00000031628 GnpatP98192 678 aa12.83□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 St18Q80TY4 1045 aa12.83□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Gjb2Q00977 226 aa12.82□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Bend3Q6PAL0 825 aa12.82□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Gimap6Q8K349 305 aa12.82□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Il1rapl2Q9ERS6 686 aa12.82□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Stk36Q69ZM6 1316 aa12.82□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Pnpla7A2AJ88 1352 aa12.82□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Prdm4Q80V63 803 aa12.82□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 AnlnQ8K298 1121 aaKnown RBP12.82□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Tet3Q8BG87 1668 aa12.82□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Gm45015A0A140LII9 184 aa12.82□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Gm18336A0A140LIU8 765 aa12.82□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Evi5lH3BKQ3 813 aa12.82□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Sparcl1P70663 650 aa12.82□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Pank2Q3U4S0 443 aa12.82□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Usp48Q3V0C5 1052 aa12.82□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Fbxo41Q6NS60 873 aa12.82□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Ptpn23Q6PB44 1692 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 55.9 ms