RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Rtf1A2AQ19 715 aaKnown RBP16.24■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Zkscan2G3X952 960 aa16.24■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Cers3Q1A3B0 383 aa16.24■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Eif3aP23116 1344 aaKnown RBP16.24■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Ripk4Q9ERK0 786 aa16.24■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 MpndQ3TV65 487 aa16.23■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Ddx17Q501J6 650 aaKnown RBP16.23■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Zfp142G5E869 1843 aa16.23■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Gnai2P08752 355 aaKnown RBP16.23■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Fmnl2A2APV2 1086 aa16.22■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Atp6v1dP57746 247 aa16.22■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Atp8b2P98199 1209 aa16.22■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Kiaa0753Q6A000 959 aa16.22■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Mum1Q6DID5 682 aa16.22■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Mcm4P49717 862 aa16.21■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Ppip5k2Q6ZQB6 1129 aa16.21■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Tbc1d4Q8BYJ6 1307 aa16.21■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Zhx1P70121 873 aa16.21■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Tns2Q8CGB6 1400 aa16.21■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Smarce1O54941 411 aaKnown RBP16.21■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Mmp8O70138 465 aa16.21■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Mmp14P53690 582 aa16.21■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 AnlnQ8K298 1121 aaKnown RBP16.21■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Ssr1Q9CY50 286 aaKnown RBP16.21■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Eya1P97767 591 aa16.2■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Erich4Q3UNU4 136 aa16.2■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Abca3Q8R420 1704 aa16.2■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 CoilQ5SU73 570 aa16.2■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 TatQ8QZR1 454 aa16.2■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Casq1O09165 405 aa16.19■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 ImpactO55091 318 aa16.19■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Pdia3P27773 505 aaKnown RBP16.19■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Ddit3P35639 168 aa16.19■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Rfx1P48377 963 aa16.19■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Sv2bQ8BG39 683 aa16.19■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Gimap5Q8BWF2 308 aa16.19■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 1700006A11RikB9EHI3 544 aa16.19■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Erc2Q6PH08 957 aa16.19■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Nsfl1cQ9CZ44 370 aaKnown RBP16.19■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Prkar2bP31324 416 aa16.19■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Ssh1Q76I79 1042 aa16.19■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Zkscan1Q8BGS3 561 aaKnown RBP16.19■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Plin1Q8CGN5 517 aa16.19■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Ccdc7Q9D541 371 aa16.19■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Cyp46a1Q9WVK8 500 aa16.19■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Flt4P35917 1363 aa16.18■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Col1a2Q01149 1372 aa16.18■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Chmp4cQ9D7F7 232 aa16.18■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 LlphQ9D945 130 aaKnown RBP16.18■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Dnajc10Q9DC23 793 aa16.18■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Card10P58660 1021 aa16.18■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Cct4P80315 539 aaKnown RBP16.18■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 HellsQ60848 821 aa16.18■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Vsig10D3YX43 558 aa16.17■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Ddx19aQ61655 478 aaKnown RBP16.17■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 ZgpatQ8VDM1 511 aa16.17■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Disp3A3KFU9 1347 aa16.17■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Mcmdc2E9Q956 681 aa16.17■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Pdia4P08003 638 aaKnown RBP16.17■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Sipa1l3G3X9J0 1776 aa16.16■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Atg4a-psA0A0G2JFS9 396 aa16.16■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Plcb2A3KGF7 1181 aa16.16■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Atg4aQ8C9S8 396 aa16.16■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Aox2Q5SGK3 1345 aa16.16■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 GorabQ8BRM2 368 aa16.16■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Nphp1Q9QY53 687 aa16.16■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Echdc1Q9D9V3 322 aa16.15■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 SetQ9EQU5 289 aaKnown RBP16.15■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Strn4P58404 760 aa16.15■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Ccne1Q61457 408 aa16.15■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Tmem132eQ6IEE6 982 aa16.15■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 Nol11Q8BJW5 723 aaKnown RBP16.15■□□□□ 0.18
Prpf38b-201ENSMUST00000029480 MccE9PWI3 1003 aa16.14■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Fam114a1Q9D281 569 aa16.14■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Nek4Q9Z1J2 792 aa16.14■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Ccdc146E9Q9F7 977 aa16.14■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Klhl34A2AI76 644 aa16.13■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Il4rP16382 810 aa16.13■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 MpripP97434 1024 aa16.13■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Tfip11Q9ERA6 838 aaKnown RBP16.13■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Ybx3Q9JKB3 361 aaKnown RBP16.13■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 OptnQ8K3K8 584 aa16.13■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Nol7Q9D7Z3 254 aaKnown RBP16.13■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Gm21698A0A087WQP8 267 aa16.12■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Gm21671G3UY31 267 aa16.12■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Tiam2Q6ZPF3 1715 aa16.12■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Hspa1lP16627 641 aa16.12■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Amotl2Q8K371 772 aa16.12■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Kiaa0232Q80U59 1396 aaKnown RBP16.11■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 PsapQ61207 557 aaKnown RBP16.11■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Dmrtc1Q9D9R7 182 aa16.11■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Cdhr2E9Q7P9 1308 aa16.11■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Mybbp1aQ7TPV4 1344 aaKnown RBP16.11■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Slx1bQ8BX32 270 aa16.11■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Cyp27a1Q9DBG1 533 aa16.11■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Vwa3bJ9JI28 736 aa16.11■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Mcm10Q0VBD2 885 aa16.11■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Pdcl2Q78Y63 240 aa16.11■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 FanclQ9CR14 375 aa16.11■□□□□ 0.17
Prpf38b-201ENSMUST00000029480 Fbxl16A2RT62 479 aa16.1■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 84.1 ms