RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Ccdc112A0AUP1 442 aa10.85□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Ccdc181Q80ZU5 509 aa10.85□□□□□ -0.67
Ctc1-201ENSMUST00000021278 TnmdQ9EP64 317 aa10.85□□□□□ -0.67
Ctc1-201ENSMUST00000021278 PrimpolQ6P1E7 537 aa10.85□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Rufy1Q8BIJ7 712 aa10.85□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Smc3Q9CW03 1217 aaKnown RBP10.85□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Actn3O88990 900 aaKnown RBP10.85□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Cnga1P29974 684 aa10.85□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Ccdc57Q6PHN1 1016 aa10.85□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Gimap5Q8BWF2 308 aa10.85□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Hnrnpul1Q8VDM6 859 aaKnown RBP10.85□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Dip2bQ3UH60 1574 aa10.85□□□□□ -0.67
Ctc1-201ENSMUST00000021278 AlkP97793 1621 aa10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Smarcc1P97496 1104 aa10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Znf697Q569E7 569 aa10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Smc1aQ9CU62 1233 aaKnown RBP10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Abcc6Q9R1S7 1498 aa10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Asxl2Q8BZ32 1370 aa10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Vps37dQ810I0 261 aa10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Phf20l1Q8CCJ9 1013 aa10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Calcoco1Q8CGU1 691 aa10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Gdpd2Q9ESM6 539 aa10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 EcsitQ9QZH6 435 aa10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Usp47Q8BY87 1376 aa10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Tpm3-rs7D3Z2H9 248 aa10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Cnnm3Q32NY4 713 aa10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Sycp1Q62209 993 aa10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Suds3Q8BR65 328 aa10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Ddx27Q921N6 760 aaKnown RBP10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Xrn1P97789 1719 aaKnown RBP10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Jakmip3Q5DTN8 844 aa10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Smarcc2Q6PDG5 1213 aa10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 HnrnpuQ8VEK3 800 aaKnown RBP10.84□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Gm9992B2RWK3 458 aa10.83□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Unc93aQ710D3 458 aa10.83□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Proca1B0QZF7 307 aa10.83□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Tbc1d31Q6NXY1 996 aa10.83□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Ppp6r1Q7TSI3 856 aa10.83□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Ccdc60Q8C4J0 545 aa10.83□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Elf2Q9JHC9 593 aa10.83□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Zscan29E9Q5B4 869 aa10.83□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Rab3il1Q8VDV3 383 aa10.83□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Tex19.1Q99MV2 351 aa10.83□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Sall3Q62255 1320 aa10.83□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Ttll5Q8CHB8 1328 aa10.82□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Gigyf2Q6Y7W8 1291 aaKnown RBP10.82□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Q9D9H8 365 aa10.82□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Adgrl2Q8JZZ7 1487 aa10.82□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Mcm2P97310 904 aa10.82□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Kmt5bQ3U8K7 883 aa10.82□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Eif4g2Q62448 906 aaKnown RBP10.82□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Trak2Q6P9N8 913 aa10.82□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Hook1Q8BIL5 728 aa10.82□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Ccer1Q9CQL2 403 aa10.82□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Tpcn1Q9EQJ0 817 aa10.82□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Plch2A2AP18 1501 aa10.82□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Naif1Q6PFD7 327 aa10.82□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Slu7Q8BHJ9 585 aa10.82□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Rassf10Q8BL43 508 aa10.82□□□□□ -0.68
Ctc1-201ENSMUST00000021278 ClasrpQ8CFC7 668 aa10.82□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Med4Q9CQA5 270 aa10.82□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Odf2lQ9D478 642 aa10.82□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Secisbp2lQ6A098 1086 aaKnown RBP10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Znf532Q6NXK2 1036 aa10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Ppip5k2Q6ZQB6 1129 aa10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Rbbp5Q8BX09 538 aaKnown RBP10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Psmd2Q8VDM4 908 aa10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Tmf1B9EKI3 1091 aa10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Dpf1Q9QX66 387 aa10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Arl10Q9QXJ4 243 aa10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Bcl9Q9D219 1425 aa10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Rims2Q9EQZ7 1530 aa10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Cnbd1B1AWM0 430 aa10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Gm10093D3YYI8 482 aa10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Hdac1O09106 482 aaKnown RBP10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Psen1P49769 467 aa10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Usp25P57080 1055 aa10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Evi5P97366 809 aa10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Abcf1Q6P542 837 aaKnown RBP10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 U2af1Q9D883 239 aaKnown RBP10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Vps8Q0P5W1 1427 aa10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Cd109Q8R422 1442 aa10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Phlpp2Q8BXA7 1320 aa10.81□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Duxf3A0A0N4SV92 674 aa10.8□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Scp2P32020 547 aaKnown RBP10.8□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Shq1Q7TMX5 569 aa10.8□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Frat2Q8K025 231 aa10.8□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Nsd2Q8BVE8 1365 aa10.8□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Ltbp4Q8K4G1 1666 aa10.8□□□□□ -0.68
Ctc1-201ENSMUST00000021278 FosbP13346 338 aa10.8□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Q32P12 615 aa10.8□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Bag1Q60739 355 aa10.8□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Slc5a4bQ91ZP4 660 aa10.8□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Ccdc73Q8CDM4 1066 aa10.8□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Naa30Q8CES0 364 aa10.8□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Cfdp1O88271 295 aaKnown RBP10.8□□□□□ -0.68
Ctc1-201ENSMUST00000021278 EappQ5BU09 281 aa10.8□□□□□ -0.68
Ctc1-201ENSMUST00000021278 KinQ8K339 391 aa10.8□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Knl1Q66JQ7 1612 aa10.79□□□□□ -0.68
Ctc1-201ENSMUST00000021278 Myom3A2ABU4 1439 aa10.79□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms