RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 Pdzd9Q9D9M4 266 aa12.26□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Atp8b2P98199 1209 aa12.26□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Hs1bp3Q3TC93 395 aa12.26□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Dixdc1Q80Y83 711 aa12.26□□□□□ -0.45
Rnft1-201ENSMUST00000020827 KnstrnQ9D9Z1 312 aaKnown RBP12.25□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Bag4Q8CI61 457 aa12.25□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Dnttip2Q8R2M2 758 aaKnown RBP12.25□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Slx4ipQ9D7Y9 413 aa12.25□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Il1rapl2Q9ERS6 686 aa12.25□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Znf335A2A5K6 1337 aa12.24□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Elmsan1E9Q2I4 1089 aaKnown RBP12.24□□□□□ -0.45
Rnft1-201ENSMUST00000020827 SympkQ80X82 1284 aa12.24□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Tsr2Q8C8T8 191 aa12.24□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Mrpl50Q8VDT9 159 aaKnown RBP12.24□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Zfp142G5E869 1843 aa12.24□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Adora1Q60612 326 aa12.24□□□□□ -0.45
Rnft1-201ENSMUST00000020827 OptnQ8K3K8 584 aa12.24□□□□□ -0.45
Rnft1-201ENSMUST00000020827 GckrQ91X44 587 aa12.24□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Zfp804bA0A0G2JGH6 1343 aa12.24□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Lmbr1lQ9D1E5 489 aa12.24□□□□□ -0.45
Rnft1-201ENSMUST00000020827 EvcP57680 1005 aa12.23□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Bicc1Q99MQ1 977 aaKnown RBP12.23□□□□□ -0.45
Rnft1-201ENSMUST00000020827 RgmbQ7TQ33 436 aa12.23□□□□□ -0.45
Rnft1-201ENSMUST00000020827 GphnQ8BUV3 769 aaKnown RBP12.23□□□□□ -0.45
Rnft1-201ENSMUST00000020827 AceP09470 1312 aa12.23□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Cetn4Q8K4K1 168 aa12.23□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Col1a2Q01149 1372 aa12.22□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Rsph4aQ8BYM7 716 aa12.22□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Zbtb22Q9Z0G7 638 aa12.22□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Gli3Q61602 1583 aa12.22□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Mcmdc2E9Q956 681 aa12.22□□□□□ -0.45
Rnft1-201ENSMUST00000020827 PogkQ80TC5 607 aa12.22□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Pof1bQ8K4L4 587 aa12.22□□□□□ -0.45
Rnft1-201ENSMUST00000020827 CebpaP53566 359 aa12.22□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Zranb3Q6NZP1 1069 aa12.21□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Kdm4cQ8VCD7 1054 aa12.21□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Nid2O88322 1403 aa12.21□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Scn4aQ9ER60 1841 aa12.21□□□□□ -0.45
Rnft1-201ENSMUST00000020827 Pkp1P97350 728 aaKnown RBP12.21□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Ano8Q6PB70 1060 aa12.21□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Igsf1Q7TQA1 1317 aa12.2□□□□□ -0.46
Rnft1-201ENSMUST00000020827 TimelessQ9R1X4 1197 aa12.2□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Vwa3bJ9JI28 736 aa12.2□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Ms4a2P20490 235 aa12.2□□□□□ -0.46
Rnft1-201ENSMUST00000020827 NpeppsQ11011 920 aa12.2□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Brf1Q8CFK2 676 aa12.2□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Sept12Q9D451 317 aa12.2□□□□□ -0.46
Rnft1-201ENSMUST00000020827 TrhQ62361 256 aa12.19□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Asic4Q7TNS7 539 aa12.19□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Ppm1mQ8BU27 406 aa12.19□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Ugt1a5B2RT14 529 aa12.19□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Zbtb3Q91X45 518 aa12.19□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Syde2E9PUP1 1314 aa12.19□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Gm21698A0A087WQP8 267 aa12.19□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Gm21671G3UY31 267 aa12.19□□□□□ -0.46
Rnft1-201ENSMUST00000020827 CrklP47941 303 aa12.19□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Paxip1Q6NZQ4 1056 aa12.19□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Ints5Q8CHT3 1018 aa12.19□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Gcc1Q9D4H2 778 aa12.19□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Pdzrn3Q69ZS0 1063 aa12.18□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Rnf214Q8BFU3 668 aaKnown RBP12.18□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Farp2Q91VS8 1065 aa12.18□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Rufy3Q9D394 469 aa12.18□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Amotl1Q9D4H4 968 aa12.18□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Hsp90b1P08113 802 aaKnown RBP12.18□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Erc2Q6PH08 957 aa12.18□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Nol11Q8BJW5 723 aaKnown RBP12.18□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Rims2Q9EQZ7 1530 aa12.17□□□□□ -0.46
Rnft1-201ENSMUST00000020827 ThemisQ8BGW0 636 aa12.17□□□□□ -0.46
Rnft1-201ENSMUST00000020827 CerkQ8K4Q7 531 aa12.17□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Cyp2d10P24456 504 aa12.17□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Sp8Q8BMJ8 486 aa12.17□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Tmx3Q8BXZ1 456 aa12.17□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Pank2Q3U4S0 443 aa12.17□□□□□ -0.46
Rnft1-201ENSMUST00000020827 TnrQ8BYI9 1358 aa12.17□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Cnksr1A2A9K7 700 aa12.17□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Taf5lQ91WQ5 589 aa12.17□□□□□ -0.46
Rnft1-201ENSMUST00000020827 IncenpQ9WU62 880 aa12.17□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Anapc15-psA0A140T8L6 141 aa12.16□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Brpf1B2RRD7 1212 aa12.16□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Vps54Q5SPW0 977 aa12.16□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Ncoa4Q5U4H9 625 aa12.16□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Cnnm1Q0GA42 951 aa12.16□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Bms1Q6PGF5 1284 aaKnown RBP12.16□□□□□ -0.46
Rnft1-201ENSMUST00000020827 MypnQ5DTJ9 1315 aa12.16□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Tjp1P39447 1745 aaKnown RBP12.16□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Rtn4Q99P72 1162 aaKnown RBP12.15□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Ank1Q02357 1862 aa12.15□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Mdm2P23804 489 aa12.15□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Nol8Q3UHX0 1147 aaKnown RBP12.15□□□□□ -0.46
Rnft1-201ENSMUST00000020827 Syce3B5KM66 88 aa12.15□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Anxa1P10107 346 aaKnown RBP12.15□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Shisa4Q8CA71 197 aa12.15□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Timm10P62073 90 aa12.14□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Htatsf1Q8BGC0 757 aa12.14□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Siglec1Q62230 1695 aa12.14□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Rimbp3Q3V0F0 1606 aa12.14□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Dis3l2Q8CI75 870 aaKnown RBP12.14□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Phkg2Q9DB30 406 aa12.14□□□□□ -0.47
Rnft1-201ENSMUST00000020827 Flt4P35917 1363 aa12.14□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms