RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 FancaQ9JL70 1439 aa13.68□□□□□ -0.22
Herc4-201ENSMUST00000020258 Tpm2P58774 284 aa13.68□□□□□ -0.22
Herc4-201ENSMUST00000020258 Hoxb7P09024 217 aa13.68□□□□□ -0.22
Herc4-201ENSMUST00000020258 Igflr1Q3U4N7 345 aa13.68□□□□□ -0.22
Herc4-201ENSMUST00000020258 Med14A2ABV5 1459 aaKnown RBP13.67□□□□□ -0.22
Herc4-201ENSMUST00000020258 Cct2P80314 535 aaKnown RBP13.67□□□□□ -0.22
Herc4-201ENSMUST00000020258 Ddx46Q569Z5 1032 aaKnown RBP13.67□□□□□ -0.22
Herc4-201ENSMUST00000020258 Zpr1Q62384 459 aa13.67□□□□□ -0.22
Herc4-201ENSMUST00000020258 Unc5clQ6R653 518 aa13.67□□□□□ -0.22
Herc4-201ENSMUST00000020258 Ncbp3Q8BZR9 615 aaKnown RBP13.67□□□□□ -0.22
Herc4-201ENSMUST00000020258 Mdm2P23804 489 aa13.67□□□□□ -0.22
Herc4-201ENSMUST00000020258 PsapQ61207 557 aaKnown RBP13.67□□□□□ -0.22
Herc4-201ENSMUST00000020258 Nup88Q8CEC0 753 aaKnown RBP13.67□□□□□ -0.22
Herc4-201ENSMUST00000020258 Rbm8a2A0A0N4SUH6 174 aa13.67□□□□□ -0.22
Herc4-201ENSMUST00000020258 Rbm8aQ9CWZ3 174 aa13.67□□□□□ -0.22
Herc4-201ENSMUST00000020258 Rrs1Q9CYH6 365 aaKnown RBP13.67□□□□□ -0.22
Herc4-201ENSMUST00000020258 Wdr78E9PYY5 807 aa13.66□□□□□ -0.22
Herc4-201ENSMUST00000020258 CebpzP53569 1052 aaKnown RBP13.66□□□□□ -0.22
Herc4-201ENSMUST00000020258 Ddx17Q501J6 650 aaKnown RBP13.66□□□□□ -0.22
Herc4-201ENSMUST00000020258 Zbtb21E9Q444 1094 aa13.66□□□□□ -0.22
Herc4-201ENSMUST00000020258 Tti2Q8BGV4 512 aa13.66□□□□□ -0.22
Herc4-201ENSMUST00000020258 Gm21698A0A087WQP8 267 aa13.66□□□□□ -0.22
Herc4-201ENSMUST00000020258 Gm21671G3UY31 267 aa13.66□□□□□ -0.22
Herc4-201ENSMUST00000020258 Mmel1Q9JLI3 765 aa13.66□□□□□ -0.22
Herc4-201ENSMUST00000020258 Vwa3bJ9JI28 736 aa13.65□□□□□ -0.22
Herc4-201ENSMUST00000020258 Cct4P80315 539 aaKnown RBP13.65□□□□□ -0.22
Herc4-201ENSMUST00000020258 Rnf20Q5DTM8 973 aa13.65□□□□□ -0.22
Herc4-201ENSMUST00000020258 TnmdQ9EP64 317 aa13.65□□□□□ -0.22
Herc4-201ENSMUST00000020258 Eif2ak4Q9QZ05 1648 aa13.65□□□□□ -0.22
Herc4-201ENSMUST00000020258 Syt1P46096 421 aa13.65□□□□□ -0.22
Herc4-201ENSMUST00000020258 Dip2cE9PWR4 1557 aa13.65□□□□□ -0.22
Herc4-201ENSMUST00000020258 Anapc15P60007 132 aa13.65□□□□□ -0.22
Herc4-201ENSMUST00000020258 Ercc6l2Q9JIM3 1537 aa13.65□□□□□ -0.22
Herc4-201ENSMUST00000020258 Dhx38Q80X98 1228 aa13.65□□□□□ -0.23
Herc4-201ENSMUST00000020258 NaspQ99MD9 773 aaKnown RBP13.65□□□□□ -0.23
Herc4-201ENSMUST00000020258 Bicc1Q99MQ1 977 aaKnown RBP13.65□□□□□ -0.23
Herc4-201ENSMUST00000020258 Irgm2A0A140LIF8 407 aa13.64□□□□□ -0.23
Herc4-201ENSMUST00000020258 Tnnt2P50752 301 aa13.64□□□□□ -0.23
Herc4-201ENSMUST00000020258 Ifit2Q64112 472 aa13.64□□□□□ -0.23
Herc4-201ENSMUST00000020258 Pip4k2bQ80XI4 416 aa13.64□□□□□ -0.23
Herc4-201ENSMUST00000020258 Cchcr1Q8K2I2 770 aa13.64□□□□□ -0.23
Herc4-201ENSMUST00000020258 Uhrf1bp1B2KF50 1429 aa13.64□□□□□ -0.23
Herc4-201ENSMUST00000020258 Ppfia1B2RXQ2 1266 aa13.64□□□□□ -0.23
Herc4-201ENSMUST00000020258 Cfap73J3QPZ5 306 aa13.64□□□□□ -0.23
Herc4-201ENSMUST00000020258 Pde3bQ61409 1100 aa13.64□□□□□ -0.23
Herc4-201ENSMUST00000020258 GckrQ91X44 587 aa13.64□□□□□ -0.23
Herc4-201ENSMUST00000020258 BccipQ9CWI3 316 aa13.64□□□□□ -0.23
Herc4-201ENSMUST00000020258 Ndufa8Q9DCJ5 172 aa13.64□□□□□ -0.23
Herc4-201ENSMUST00000020258 Bag3Q9JLV1 577 aaKnown RBP13.64□□□□□ -0.23
Herc4-201ENSMUST00000020258 Erbb4Q61527 1308 aa13.64□□□□□ -0.23
Herc4-201ENSMUST00000020258 R3hcc1Q8BSI6 488 aa13.64□□□□□ -0.23
Herc4-201ENSMUST00000020258 Utp18Q5SSI6 552 aaKnown RBP13.63□□□□□ -0.23
Herc4-201ENSMUST00000020258 Prkab2Q6PAM0 271 aa13.63□□□□□ -0.23
Herc4-201ENSMUST00000020258 Rufy3Q9D394 469 aa13.63□□□□□ -0.23
Herc4-201ENSMUST00000020258 Echdc1Q9D9V3 322 aa13.63□□□□□ -0.23
Herc4-201ENSMUST00000020258 Fndc1E9Q043 1732 aa13.63□□□□□ -0.23
Herc4-201ENSMUST00000020258 Abca8aQ8K442 1620 aa13.63□□□□□ -0.23
Herc4-201ENSMUST00000020258 Strn4P58404 760 aa13.63□□□□□ -0.23
Herc4-201ENSMUST00000020258 Irf9Q61179 399 aa13.63□□□□□ -0.23
Herc4-201ENSMUST00000020258 MaddQ80U28 1577 aa13.63□□□□□ -0.23
Herc4-201ENSMUST00000020258 Cbx1P83917 185 aaKnown RBP13.63□□□□□ -0.23
Herc4-201ENSMUST00000020258 Hand2Q61039 217 aa13.63□□□□□ -0.23
Herc4-201ENSMUST00000020258 Soga3Q6NZL0 945 aa13.63□□□□□ -0.23
Herc4-201ENSMUST00000020258 RdxP26043 583 aaKnown RBP13.62□□□□□ -0.23
Herc4-201ENSMUST00000020258 Nol10Q5RJG1 687 aaKnown RBP13.62□□□□□ -0.23
Herc4-201ENSMUST00000020258 Kiaa0556Q8C753 1610 aa13.62□□□□□ -0.23
Herc4-201ENSMUST00000020258 Gm973E9Q295 1059 aa13.62□□□□□ -0.23
Herc4-201ENSMUST00000020258 Hook1Q8BIL5 728 aa13.62□□□□□ -0.23
Herc4-201ENSMUST00000020258 Fam84aQ9D650 292 aa13.62□□□□□ -0.23
Herc4-201ENSMUST00000020258 Speer4bQ9D9F7 267 aa13.62□□□□□ -0.23
Herc4-201ENSMUST00000020258 Nrxn1Q9CS84 1514 aa13.62□□□□□ -0.23
Herc4-201ENSMUST00000020258 Abca17E9PX95 1733 aa13.62□□□□□ -0.23
Herc4-201ENSMUST00000020258 Ccdc173A0JLY1 547 aa13.62□□□□□ -0.23
Herc4-201ENSMUST00000020258 Clcn1Q64347 994 aa13.62□□□□□ -0.23
Herc4-201ENSMUST00000020258 Fam170aQ66LM6 333 aa13.62□□□□□ -0.23
Herc4-201ENSMUST00000020258 Ttc19Q8CC21 365 aa13.62□□□□□ -0.23
Herc4-201ENSMUST00000020258 Foxp4Q9DBY0 795 aaKnown RBP13.62□□□□□ -0.23
Herc4-201ENSMUST00000020258 Atp7bQ64446 1462 aa13.62□□□□□ -0.23
Herc4-201ENSMUST00000020258 Astn2Q80Z10 1352 aa13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 PtprmP28828 1452 aa13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 Elmsan1E9Q2I4 1089 aaKnown RBP13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 Vps54Q5SPW0 977 aa13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 Kdm4aQ8BW72 1064 aa13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 Lmbrd2Q8C561 694 aa13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 Ak2Q9WTP6 239 aa13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 Atp10aO54827 1508 aa13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 NmiO35309 314 aa13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 Fsd1Q7TPM6 496 aa13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 TefQ9JLC6 301 aa13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 Psma5Q9Z2U1 241 aaKnown RBP13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 Ahdc1Q6PAL7 1594 aaKnown RBP13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 Gm21663A0A0G2JE01 267 aa13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 Gm7361D3Z6R1 267 aa13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 5031410I06RikE9Q4E0 267 aa13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 Gm1979E9QAN3 267 aa13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 Gm5862K7N5V5 267 aa13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 Gm10220K7N660 267 aa13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 Pkp1P97350 728 aaKnown RBP13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 Ddx19aQ61655 478 aaKnown RBP13.61□□□□□ -0.23
Herc4-201ENSMUST00000020258 Ifit1Q64282 463 aa13.61□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms