RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Arid3cA6PWV5 409 aa21.24■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 MpndQ3TV65 487 aa21.24■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 OvosQ3UU35 1456 aa21.24■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Tmem132aQ922P8 1018 aa21.24■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Plcd3Q8K2J0 785 aa21.23■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Zbtb22Q9Z0G7 638 aa21.23■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 NpatQ8BMA5 1420 aa21.23■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Idi2Q8BFZ6 227 aa21.23■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Ercc6lQ8BHK9 1240 aa21.23■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Nup88Q8CEC0 753 aaKnown RBP21.23■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Card6E9PWH2 1175 aa21.22■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Sv2bQ8BG39 683 aa21.22■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Frmpd2A0A140LI67 1392 aa21.22■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Spata31d1bE9QA57 1361 aa21.22■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Abca14E9Q8F8 1683 aa21.22■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Gjb2Q00977 226 aa21.22■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Babam1Q3UI43 333 aa21.22■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Rufy3Q9D394 469 aa21.22■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Adgrb1Q3UHD1 1582 aa21.22■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Tpx2A2APB8 745 aaKnown RBP21.22■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Cd22P35329 862 aa21.22■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Q9D9H8 365 aa21.21■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Ifi35Q9D8C4 286 aa21.21■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Mlh1Q9JK91 760 aa21.21■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Cdk4P30285 303 aa21.2■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Taf3Q5HZG4 932 aa21.2■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Gtpbp4Q99ME9 634 aaKnown RBP21.2■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Rad50P70388 1312 aa21.2■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Sh3bp1P55194 680 aa21.2■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Syt1P46096 421 aa21.19■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Ttc27Q8CD92 847 aa21.19■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Nlrp3Q8R4B8 1033 aa21.19■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Igbp1bQ9QZ29 343 aa21.19■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Mad1l1Q9WTX8 717 aaKnown RBP21.19■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Atp8b2P98199 1209 aa21.18■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Unc5clQ6R653 518 aa21.18■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Ggnbp2Q5SV77 696 aa21.18■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Ccne1Q61457 408 aa21.18■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Dixdc1Q80Y83 711 aa21.18■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Ddx41Q91VN6 622 aaKnown RBP21.18■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Cers3Q1A3B0 383 aa21.17■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Zfp397Q7TNK4 527 aa21.17■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Wdr33Q8K4P0 1330 aaKnown RBP21.17■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Mcmdc2E9Q956 681 aa21.17■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 MpripP97434 1024 aa21.17■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Cwc27Q3TKY6 469 aa21.17■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Nfe2l3Q9WTM4 660 aa21.17■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Usp48Q3V0C5 1052 aa21.16■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Tyro3P55144 880 aa21.16■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Nrbp1Q99J45 535 aa21.16■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 4930548H24RikQ9D496 437 aa21.16■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Zscan29E9Q5B4 869 aa21.15■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Hoxa7P02830 229 aa21.15■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Hmgn5Q9JL35 406 aa21.15■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Kif13aQ9EQW7 1749 aa21.14■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Brpf1B2RRD7 1212 aa21.14■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Kcnj4P52189 445 aa21.14■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 HypkQ9CR41 129 aa21.14■□□□□ 0.98
Sqstm1-201ENSMUST00000015981 Eif4a2P10630 407 aa21.14■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Ccz1Q8C1Y8 480 aa21.14■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Ms4a1P19437 291 aa21.13■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Fam83gQ5SWY7 812 aa21.13■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Fez2Q6TYB5 348 aa21.13■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 CenpqQ9CPQ5 267 aa21.13■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Zkscan5Q9Z1D8 819 aa21.13■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Polr3gQ6NXY9 223 aa21.13■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Nphp3Q7TNH6 1325 aa21.13■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Kansl3A2RSY1 903 aaKnown RBP21.12■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Gtpbp6Q3U6U5 514 aa21.12■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Ccdc66Q6NS45 935 aa21.12■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Ano6Q6P9J9 911 aa21.12■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Zeb2Q9R0G7 1215 aa21.12■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Evi5lH3BKQ3 813 aa21.12■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Hmx1O70218 332 aa21.12■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Kif1aP33173 1695 aa21.12■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Prim1P20664 417 aa21.12■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 TmpoQ61033 693 aaKnown RBP21.12■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Nap1l3Q794H2 544 aa21.12■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 NaspQ99MD9 773 aaKnown RBP21.12■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Esyt1Q3U7R1 1092 aaKnown RBP21.11■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Tti2Q8BGV4 512 aa21.11■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Ndufa8Q9DCJ5 172 aa21.11■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Stk36Q69ZM6 1316 aa21.11■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Add2Q9QYB8 725 aa21.11■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Ubn2Q80WC1 1314 aa21.1■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Ess2O70279 479 aa21.1■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Hoxb7P09024 217 aa21.1■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Cnnm3Q32NY4 713 aa21.1■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 CgnP59242 1191 aa21.1■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Frmd3Q8BHD4 595 aa21.1■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 TnmdQ9EP64 317 aa21.1■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Stk3Q9JI10 497 aa21.1■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Qser1A2BIE1 1698 aa21.09■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 F2rP30558 430 aa21.09■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Fmnl2A2APV2 1086 aa21.09■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Otud6bQ8K2H2 294 aa21.09■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Tlcd1Q99JT6 247 aa21.09■□□□□ 0.97
Sqstm1-201ENSMUST00000015981 Tet3Q8BG87 1668 aa21.07■□□□□ 0.96
Sqstm1-201ENSMUST00000015981 Cep135Q6P5D4 1140 aa21.07■□□□□ 0.96
Sqstm1-201ENSMUST00000015981 Q9D9S1 216 aa21.07■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 54.1 ms