RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Sbno1Q689Z5 1390 aa14.31□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Ccdc85cE9Q6B2 420 aa14.31□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Dctn1O08788 1281 aa14.31□□□□□ -0.12
Ctr9-201ENSMUST00000005749 NapbP28663 298 aa14.31□□□□□ -0.12
Ctr9-201ENSMUST00000005749 CpvlQ9D3S9 478 aa14.31□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Rab3gap1Q80UJ7 981 aa14.31□□□□□ -0.12
Ctr9-201ENSMUST00000005749 RarsQ9D0I9 660 aaKnown RBP14.31□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Pdzd9Q9D9M4 266 aa14.31□□□□□ -0.12
Ctr9-201ENSMUST00000005749 IncenpQ9WU62 880 aa14.31□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Tbc1d9Q3UYK3 1264 aa14.3□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Trim27Q62158 513 aa14.3□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Kif1bQ60575 1816 aaKnown RBP14.3□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Casp1P29452 402 aa14.3□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Znf18Q810A1 556 aa14.3□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Pik3r4Q8VD65 1358 aa14.3□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Pm20d1Q8C165 503 aa14.29□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Trim29Q8R2Q0 587 aa14.29□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Tut1Q8R3F9 869 aa14.29□□□□□ -0.12
Ctr9-201ENSMUST00000005749 AU019823E9PUQ3 292 aa14.29□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Lmod1Q8BVA4 595 aa14.29□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Krt84Q99M73 603 aa14.29□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Plekho1Q9JIY0 408 aa14.29□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Gjb2Q00977 226 aa14.29□□□□□ -0.12
Ctr9-201ENSMUST00000005749 IntuQ059U7 942 aa14.29□□□□□ -0.12
Ctr9-201ENSMUST00000005749 RtcbQ99LF4 505 aaKnown RBP14.29□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Samd1D3YXK1 519 aa14.29□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Tmem87bQ8BKU8 555 aa14.29□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Gripap1Q8VD04 806 aa14.29□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Gm16486A0A1D5RMD1 1434 aa14.28□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Irx3P81067 507 aa14.28□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Gpatch3Q8BIY1 525 aa14.28□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Col17a1Q07563 1470 aa14.28□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Slc7a3P70423 618 aa14.28□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Ccdc96Q9CR92 584 aa14.28□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Fam213aQ9CYH2 218 aa14.28□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Ces1hD3Z298 562 aa14.27□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Hap1O35668 628 aa14.27□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Pram1Q6BCL1 675 aa14.27□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Polr3dQ91WD1 398 aa14.27□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Gabpb2P81069 414 aa14.27□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Hook1Q8BIL5 728 aa14.27□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Sgsm1Q8BPQ7 1093 aa14.27□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Ginm1Q91WR6 327 aa14.27□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Riok1Q922Q2 567 aa14.27□□□□□ -0.12
Ctr9-201ENSMUST00000005749 Wdr63B2RY71 923 aa14.27□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Anxa1P10107 346 aaKnown RBP14.27□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Timm10P62073 90 aa14.27□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Cct2P80314 535 aaKnown RBP14.27□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Dusp9Q7TNL7 452 aa14.27□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Zkscan1Q8BGS3 561 aaKnown RBP14.27□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Stk38Q91VJ4 465 aa14.27□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Ccdc39Q9D5Y1 937 aa14.27□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Tbc1d8Q9Z1A9 1134 aa14.27□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Fndc1E9Q043 1732 aa14.27□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Dhx8A2A4P0 1244 aaKnown RBP14.27□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Speer4dL7N216 212 aa14.27□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Atp2b3Q0VF55 1220 aa14.27□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Edc3Q8K2D3 508 aaKnown RBP14.27□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Nos1Q9Z0J4 1429 aa14.26□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Sptbn5F6UCX4 1208 aa14.26□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Ccdc178Q8CDV0 866 aa14.26□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Ripk4Q9ERK0 786 aa14.26□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Kif4P33174 1231 aa14.26□□□□□ -0.13
Ctr9-201ENSMUST00000005749 FancaQ9JL70 1439 aa14.26□□□□□ -0.13
Ctr9-201ENSMUST00000005749 F2rP30558 430 aa14.26□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Ttc5Q99LG4 440 aa14.26□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Galntl5Q9D4M9 431 aa14.26□□□□□ -0.13
Ctr9-201ENSMUST00000005749 PigbQ9JJQ0 542 aa14.26□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Rbbp8nlA2ABX0 614 aa14.25□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Ncbp3Q8BZR9 615 aaKnown RBP14.25□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Glg1Q61543 1175 aaKnown RBP14.25□□□□□ -0.13
Ctr9-201ENSMUST00000005749 RgmbQ7TQ33 436 aa14.25□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Uhrf1bp1lA2RSJ4 1457 aa14.25□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Esco1Q69Z69 843 aa14.25□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Zfyve16Q80U44 1528 aa14.25□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Atp8b2P98199 1209 aa14.24□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Ccdc43Q9CR29 222 aaKnown RBP14.24□□□□□ -0.13
Ctr9-201ENSMUST00000005749 AU015836B2RUM3 263 aa14.24□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Sik1Q60670 779 aa14.24□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Larp1Q6ZQ58 1072 aaKnown RBP14.24□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Letm1Q9Z2I0 738 aa14.24□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Cops6O88545 324 aa14.24□□□□□ -0.13
Ctr9-201ENSMUST00000005749 March6Q6ZQ89 909 aa14.24□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Adgrl1Q80TR1 1466 aa14.24□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Krt25Q8VCW2 446 aa14.24□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Abcc3B2RX12 1523 aa14.23□□□□□ -0.13
Ctr9-201ENSMUST00000005749 ImmtQ8CAQ8 757 aaKnown RBP14.23□□□□□ -0.13
Ctr9-201ENSMUST00000005749 NaspQ99MD9 773 aaKnown RBP14.23□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Ier5O89113 308 aa14.23□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Larp6Q8BN59 492 aa14.23□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Dbndd1Q9CZ00 160 aa14.23□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Scaf11E9PZM7 1456 aaKnown RBP14.23□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Stx8O88983 236 aa14.22□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Nkx1-2P42580 305 aa14.22□□□□□ -0.13
Ctr9-201ENSMUST00000005749 EvcP57680 1005 aa14.22□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Nsd3Q6P2L6 1439 aa14.22□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Sde2Q8K1J5 448 aaKnown RBP14.22□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Fhod3Q76LL6 1578 aa14.22□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Trim28Q62318 834 aa14.22□□□□□ -0.13
Ctr9-201ENSMUST00000005749 Cep55Q8BT07 462 aa14.22□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms