RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 SPINT3P49223 89 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 SCN1BQ07699 218 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 GRM2Q14416 872 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 TMIGD2Q96BF3 282 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 GFM1Q96RP9 751 aaKnown RBP13.93□□□□□ -0.18
SCARB2-216ENST00000639300 REEP4Q9H6H4 257 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 DNAJC27Q9NZQ0 273 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 MAGEA3P43357 314 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 BTN3A2P78410 334 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 PON2Q15165 354 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 CTC1Q2NKJ3 1217 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 KCTD11Q693B1 232 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 HACD2Q6Y1H2 254 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 LARP4Q71RC2 724 aaKnown RBP eCLIP13.93□□□□□ -0.18
SCARB2-216ENST00000639300 DCUN1D3Q8IWE4 304 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 LRRC17Q8N6Y2 441 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 TRIM63Q969Q1 353 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 GAL3ST4Q96RP7 486 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 RNF38Q9H0F5 515 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 ACSL6Q9UKU0 697 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 MYBPC1Q00872 1141 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 SP140Q13342 867 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 ZNF311Q5JNZ3 666 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 LCN8Q6JVE9 175 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 RANBP3LQ86VV4 465 aaPredicted RBP13.93□□□□□ -0.18
SCARB2-216ENST00000639300 DTWD1Q8N5C7 304 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 OR4C6Q8NH72 309 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 GATA6Q92908 595 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 TOGARAM1Q9Y4F4 1720 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 NPIPB15A6NHN6 443 aaPredicted RBP13.93□□□□□ -0.18
SCARB2-216ENST00000639300 B3GALT2O43825 422 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 NRIP1P48552 1158 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 CLDN8P56748 225 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 ZNF630Q2M218 657 aaPredicted RBP13.93□□□□□ -0.18
SCARB2-216ENST00000639300 TCEANCQ8N8B7 351 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 MYRFLQ96LU7 910 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 CEP290O15078 2479 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 GLI3P10071 1580 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 IQCMA0A1B0GVH7 501 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 LOC285095A0A1B0GVY8 99 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 FABP12A6NFH5 140 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 SLC16A8O95907 504 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 GPX3P22352 226 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 VIPR2P41587 438 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 MYBPC3Q14896 1274 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 TSTQ16762 297 aaKnown RBP13.92□□□□□ -0.18
SCARB2-216ENST00000639300 SPNS2Q8IVW8 549 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 ATP6V1C2Q8NEY4 427 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 HMGB4Q8WW32 186 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 TMEM165Q9HC07 324 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 HCN4Q9Y3Q4 1203 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 DDX60LQ5H9U9 1706 aaKnown RBP13.92□□□□□ -0.18
SCARB2-216ENST00000639300 A6NHS1 94 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 CHST10O43529 356 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 TGM5O43548 720 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 C1GALT1C1LP0DN25 315 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 SRCP12931 536 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 HSD17B2P37059 387 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 MAP2K4P45985 399 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 STT3AP46977 705 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 RPS26P62854 115 aaKnown RBP13.92□□□□□ -0.18
SCARB2-216ENST00000639300 CDKL1Q00532 357 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 IRF5Q13568 498 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 SPATS1Q496A3 300 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 LIPJQ5W064 366 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 ANKFN1Q8N957 763 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 VAPAQ9P0L0 249 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 TMA7Q9Y2S6 64 aaKnown RBP13.92□□□□□ -0.18
SCARB2-216ENST00000639300 MCIDASD6RGH6 385 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 GABBR2O75899 941 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 CLPXO76031 633 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 TFPIP10646 304 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 OXTRP30559 389 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 SDC2P34741 201 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 ZXDBP98169 803 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 REEP3Q6NUK4 255 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 GJD3Q8N144 294 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 MYLIPQ8WY64 445 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 KLHL6Q8WZ60 621 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 NT5C3BQ969T7 300 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 APIPQ96GX9 242 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 UCK2Q9BZX2 261 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 TAS2R9Q9NYW1 312 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 GMPR2Q9P2T1 348 aaKnown RBP13.92□□□□□ -0.18
SCARB2-216ENST00000639300 GJD2Q9UKL4 321 aa13.92□□□□□ -0.18
SCARB2-216ENST00000639300 MUSKO15146 869 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 LAMP1P11279 417 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 JUPP14923 745 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 DDX6P26196 483 aaKnown RBP eCLIP13.91□□□□□ -0.18
SCARB2-216ENST00000639300 STAT5AP42229 794 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 PIK3CBP42338 1070 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 RPP38P78345 283 aaKnown RBP13.91□□□□□ -0.18
SCARB2-216ENST00000639300 ID2Q02363 134 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 RAB33AQ14088 237 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 ZFP69Q49AA0 526 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 USP43Q70EL4 1123 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 CCDC116Q8IYX3 515 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 SLC22A15Q8IZD6 547 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 PXYLP1Q8TE99 480 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 ZFAND2BQ8WV99 257 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms