RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CER1O95813 267 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 NPPAP01160 153 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 DGCR6Q14129 220 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 SIM2Q14190 667 aaPredicted RBP9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 PDK3Q15120 406 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 LPAL2Q16609 132 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 C9orf50Q5SZB4 431 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 AQP12AQ8IXF9 295 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 CACTIN-AS1Q8N1I8 211 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 IL22RA1Q8N6P7 574 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 TMEM125Q96AQ2 219 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 PTCHD1Q96NR3 888 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 DUSP23Q9BVJ7 150 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 PELI2Q9HAT8 420 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 KLRF1Q9NZS2 232 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 MARK1Q9P0L2 795 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 THAP10Q9P2Z0 257 aaPredicted RBP9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 AP4B1Q9Y6B7 739 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 HOXC11O43248 304 aaPredicted RBP9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 GBAP04062 536 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 C8orf89P0DMQ9 161 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 CDK6Q00534 326 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 ACY1Q03154 408 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 HYAL2Q12891 473 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 ANGPT1Q15389 498 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 SPANXN4Q5MJ08 99 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 C6orf136Q5SQH8 315 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 CEACAM20Q6UY09 585 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 SYVN1Q86TM6 617 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 PDZD3Q86UT5 571 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 ZFAND4Q86XD8 727 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 OR2A12Q8NGT7 310 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 TSPEARQ8WU66 669 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 FATE1Q969F0 183 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 DCUN1D5Q9BTE7 237 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 OR8D2Q9GZM6 311 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 TPT1P8Q9HAU6 139 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 FADS3Q9Y5Q0 445 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 A8MUI8 341 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 WWP2O00308 870 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 PDYNP01213 254 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 THRBP10828 461 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 COL11A2P13942 1736 aaPredicted RBP9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 CXCR1P25024 350 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 YAP1P46937 504 aaKnown RBP9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 CLDN2P57739 230 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 YPEL5P62699 121 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 ABHD18Q0P651 414 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 ZNF267Q14586 743 aaPredicted RBP9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 DGUOKQ16854 277 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 ADGRD2Q7Z7M1 963 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 FAM110BQ8TC76 370 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 SMPDL3BQ92485 455 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 MPP4Q96JB8 637 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 GFM1Q96RP9 751 aaKnown RBP9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 TIMM29Q9BSF4 260 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 PRSS16Q9NQE7 514 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 STMN3Q9NZ72 180 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 ATXN10Q9UBB4 475 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 TAF1LQ8IZX4 1826 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 C1orf226A1L170 272 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 ZNF860A6NHJ4 632 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 ARHGEF33A8MVX0 844 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 PRSS56P0CW18 603 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 CD9P21926 228 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 CTHP32929 405 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 RGRP47804 291 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 NFATC4Q14934 902 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 ZNF77Q15935 545 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 DEFB134Q4QY38 66 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 SLC2A7Q6PXP3 512 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 KLHL24Q6TFL4 600 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 KDM1BQ8NB78 822 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 C19orf18Q8NEA5 215 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 TSPAN14Q8NG11 270 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 RHBDD1Q8TEB9 315 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 GEMIN6Q8WXD5 167 aaKnown RBP9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 OR5P2Q8WZ92 322 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 PKP4Q99569 1192 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 CIB1Q99828 191 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 METTL7AQ9H8H3 244 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 ZNF395Q9H8N7 513 aaPredicted RBP9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 ZBTB26Q9HCK0 441 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 TAS2R9Q9NYW1 312 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 DNAJB9Q9UBS3 223 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 PRDM4Q9UKN5 801 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 PDE10AQ9Y233 779 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 WBP11Q9Y2W2 641 aaKnown RBP9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 SPIN1Q9Y657 262 aaPredicted RBP9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 BCKDKO14874 412 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 MED26O95402 600 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 C6orf47O95873 294 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 BCHEP06276 602 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 TCEA1P23193 301 aaKnown RBP9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 ARSFP54793 590 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 TRAF3Q13114 568 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 SNTA1Q13424 505 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 RAPSNQ13702 412 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 SGCBQ16585 318 aa9.1□□□□□ -0.95
CLTCL1-208ENST00000615606 TAZQ16635 292 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms