RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 SLC5A11Q8WWX8 675 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 SUSD6Q92537 303 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 SNX19Q92543 992 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 SH3KBP1Q96B97 665 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 C12orf43Q96C57 262 aaKnown RBP7.78□□□□□ -1.16
SMAD3-212ENST00000559937 ZNF764Q96H86 408 aaPredicted RBP7.78□□□□□ -1.16
SMAD3-212ENST00000559937 HSH2DQ96JZ2 352 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 EPYCQ99645 322 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 BCL7BQ9BQE9 202 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 ZDHHC5Q9C0B5 715 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 PCBD2Q9H0N5 130 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 LMAN2LQ9H0V9 348 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 OR52A5Q9H2C5 316 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 NT5DC2Q9H857 520 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 DZANK1Q9NVP4 752 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 GDE1Q9NZC3 331 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 THAP10Q9P2Z0 257 aaPredicted RBP7.78□□□□□ -1.16
SMAD3-212ENST00000559937 ATXN10Q9UBB4 475 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 FAM8A1Q9UBU6 413 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 PADI2Q9Y2J8 665 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 COQ6Q9Y2Z9 468 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 PLXND1Q9Y4D7 1925 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 HEATR5BQ9P2D3 2071 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 MYO7AQ13402 2215 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 GNG14A0A1W2PPG7 69 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 A8MVJ9 347 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 HEPACAM2A8MVW5 462 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 SLC1A7O00341 560 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 SOX1O00570 391 aaPredicted RBP7.77□□□□□ -1.17
SMAD3-212ENST00000559937 BCKDKO14874 412 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 MMP20O60882 483 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 JRKO75564 520 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 B3GALT4O96024 378 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 C9P02748 559 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 FURINP09958 794 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 HLA-EP13747 358 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 ITIH1P19827 911 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 FSHRP23945 695 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 IGFBP5P24593 272 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 CXCR2P25025 360 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 ELK4P28324 431 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 P2RY2P41231 377 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 VIPR2P41587 438 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 SLC6A11P48066 632 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 IST1P53990 364 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 ISL1P61371 349 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 ERVK-21P61565 698 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 GPM6BQ13491 265 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 DCTN2Q13561 401 aaKnown RBP7.77□□□□□ -1.17
SMAD3-212ENST00000559937 STARD3Q14849 445 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 PLCL1Q15111 1095 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 CYP2A13Q16696 494 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 DUSP6Q16828 381 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 HKDC1Q2TB90 917 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 POM121L1PQ3SYA9 428 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 FAM78AQ5JUQ0 283 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 PRAMEF14Q5SWL7 426 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 PRAMEF13Q5VWM6 474 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 EP400NLQ6ZTU2 488 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 TRMT11Q7Z4G4 463 aaKnown RBP7.77□□□□□ -1.17
SMAD3-212ENST00000559937 LRRTM4Q86VH4 590 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 FAM129CQ86XR2 697 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 ZNF547Q8IVP9 402 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 OR4A15Q8NGL6 344 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 CDC26Q8NHZ8 85 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 C16orf78Q8WTQ4 265 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 FOXJ1Q92949 421 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 PPCDCQ96CD2 204 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 PITX2Q99697 317 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 RHBGQ9H310 441 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 TMEM38AQ9H6F2 299 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 SOX17Q9H6I2 414 aaPredicted RBP7.77□□□□□ -1.17
SMAD3-212ENST00000559937 REEP1Q9H902 201 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 CCNB1IP1Q9NPC3 277 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 WASH6PQ9NQA3 447 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 VNN3Q9NY84 501 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 AHSPQ9NZD4 102 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 UTS2RQ9UKP6 389 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 FZD4Q9ULV1 537 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 ICKQ9UPZ9 632 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 EXO1Q9UQ84 846 aaKnown RBP7.77□□□□□ -1.17
SMAD3-212ENST00000559937 BTBD3Q9Y2F9 522 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 PCDHGB1Q9Y5G3 927 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 PCDHGA8Q9Y5G5 932 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 MAGED1Q9Y5V3 778 aaPredicted RBP7.77□□□□□ -1.17
SMAD3-212ENST00000559937 SNX5Q9Y5X3 404 aa7.77□□□□□ -1.17
SMAD3-212ENST00000559937 TTC28Q96AY4 2481 aa7.76□□□□□ -1.17
SMAD3-212ENST00000559937 MYO10Q9HD67 2058 aa7.76□□□□□ -1.17
SMAD3-212ENST00000559937 E9PQ18 207 aa7.76□□□□□ -1.17
SMAD3-212ENST00000559937 H3BMQ9 156 aa7.76□□□□□ -1.17
SMAD3-212ENST00000559937 K7ESM1 405 aa7.76□□□□□ -1.17
SMAD3-212ENST00000559937 ADAMDEC1O15204 470 aa7.76□□□□□ -1.17
SMAD3-212ENST00000559937 KMOO15229 486 aa7.76□□□□□ -1.17
SMAD3-212ENST00000559937 YY2O15391 372 aa7.76□□□□□ -1.17
SMAD3-212ENST00000559937 SUV39H1O43463 412 aa7.76□□□□□ -1.17
SMAD3-212ENST00000559937 TNFRSF21O75509 655 aa7.76□□□□□ -1.17
SMAD3-212ENST00000559937 KRT75O95678 551 aa7.76□□□□□ -1.17
SMAD3-212ENST00000559937 CDK4P11802 303 aa7.76□□□□□ -1.17
SMAD3-212ENST00000559937 JUNDP17535 347 aa7.76□□□□□ -1.17
SMAD3-212ENST00000559937 EEF1B2P24534 225 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms