RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 LIPAP38571 399 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 RXRGP48443 463 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 STARD3Q14849 445 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 INAQ16352 499 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 SYT6Q5T7P8 510 aaPredicted RBP17.04■□□□□ 0.32
XRCC3-218ENST00000557439 GRHL2Q6ISB3 625 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 FAHD1Q6P587 224 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 ERICH5Q6P6B1 374 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 TTC23LQ6PF05 361 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 CCDC103Q8IW40 242 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 SYTL1Q8IYJ3 562 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 NLGN4XQ8N0W4 816 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 SLC5A8Q8N695 610 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 ZNF740Q8NDX6 193 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 TAMM41Q96BW9 452 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 SORBS1Q9BX66 1292 aaKnown RBP17.04■□□□□ 0.32
XRCC3-218ENST00000557439 EMILIN2Q9BXX0 1053 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 RNF167Q9H6Y7 350 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 RC3H2Q9HBD1 1191 aaKnown RBP17.04■□□□□ 0.32
XRCC3-218ENST00000557439 ZBTB20Q9HC78 741 aaPredicted RBP17.04■□□□□ 0.32
XRCC3-218ENST00000557439 RAD18Q9NS91 495 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 SOBPA7XYQ1 873 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 ADAM23O75077 832 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 MYO1DO94832 1006 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 ZNF8P17098 575 aaPredicted RBP17.04■□□□□ 0.32
XRCC3-218ENST00000557439 TGFBR2P37173 567 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 SLC19A1P41440 591 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 IDH2P48735 452 aaKnown RBP17.04■□□□□ 0.32
XRCC3-218ENST00000557439 ST13P50502 369 aaKnown RBP17.04■□□□□ 0.32
XRCC3-218ENST00000557439 POLR2LP62875 67 aaKnown RBP17.04■□□□□ 0.32
XRCC3-218ENST00000557439 NTHL1P78549 312 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 ZNF846Q147U1 533 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 CNKSR3Q6P9H4 555 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 MSANTD1Q6ZTZ1 278 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 ARMCX6Q7L4S7 300 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 TSPYL5Q86VY4 417 aaPredicted RBP17.04■□□□□ 0.32
XRCC3-218ENST00000557439 KREMEN2Q8NCW0 462 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 DYNC2LI1Q8TCX1 351 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 NIPSNAP1Q9BPW8 284 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 HEPHQ9BQS7 1158 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 ASAH2Q9NR71 780 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 NDUFAF4Q9P032 175 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 TRIM17Q9Y577 477 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 K7ESM1 405 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 FGF18O76093 207 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 CDH3P22223 829 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 CD97P48960 835 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 MVDP53602 400 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 CDH12P55289 794 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 TMEM115Q12893 351 aaPredicted RBP17.03■□□□□ 0.32
XRCC3-218ENST00000557439 RASGRP3Q8IV61 690 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 MFSD4AQ8N468 514 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 OR9Q2Q8NGE9 314 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 ZNF480Q8WV37 535 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 CHTF18Q8WVB6 975 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 TBC1D20Q96BZ9 403 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 ERVW-1Q9UQF0 538 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 MAP4K5Q9Y4K4 846 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 PLXND1Q9Y4D7 1925 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 KRBA1A5PL33 1030 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 H0YIV9 168 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 CRISP3P54108 245 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 TBPL1P62380 186 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 CYP4F2P78329 520 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 MPEG1Q2M385 716 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 SLC39A5Q6ZMH5 540 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 PAGE2Q7Z2X7 111 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 PGBD3Q8N328 593 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 NFKBIDQ8NI38 313 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 BTN2A2Q8WVV5 523 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 IRF7Q92985 503 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 AP2M1Q96CW1 435 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 LGALS12Q96DT0 336 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 HMG20AQ9NP66 347 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 TAS2R16Q9NYV7 291 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 RHCGQ9UBD6 479 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 LYVE1Q9Y5Y7 322 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 NOTCH4Q99466 2003 aa17.03■□□□□ 0.32
XRCC3-218ENST00000557439 TNFRSF11BO00300 401 aa17.02■□□□□ 0.32
XRCC3-218ENST00000557439 SLC22A1O15245 554 aa17.02■□□□□ 0.32
XRCC3-218ENST00000557439 XPAP23025 273 aaPredicted RBP17.02■□□□□ 0.32
XRCC3-218ENST00000557439 TIA1P31483 386 aaKnown RBP eCLIP17.02■□□□□ 0.32
XRCC3-218ENST00000557439 MESP2Q0VG99 397 aa17.02■□□□□ 0.32
XRCC3-218ENST00000557439 CBX3Q13185 183 aa17.02■□□□□ 0.32
XRCC3-218ENST00000557439 CFAP206Q8IYR0 622 aa17.02■□□□□ 0.32
XRCC3-218ENST00000557439 YME1L1Q96TA2 773 aa17.02■□□□□ 0.32
XRCC3-218ENST00000557439 PALMDQ9NP74 551 aa17.02■□□□□ 0.32
XRCC3-218ENST00000557439 OR2A25A4D2G3 310 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 FAM227AF5H4B4 570 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 PRMT3O60678 531 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 CXCL14O95715 111 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 CATP04040 527 aaKnown RBP17.02■□□□□ 0.31
XRCC3-218ENST00000557439 CSF2RAP15509 400 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 LAG3P18627 525 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 GRK5P34947 590 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 VEZF1Q14119 521 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 SLBPQ14493 270 aaKnown RBP eCLIP17.02■□□□□ 0.31
XRCC3-218ENST00000557439 GANABQ14697 944 aaKnown RBP17.02■□□□□ 0.31
XRCC3-218ENST00000557439 ZNF284Q2VY69 593 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 DEFB115Q30KQ5 88 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms