RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 UBE2Q2Q8WVN8 375 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 METTL21AQ8WXB1 218 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 PIK3R3Q92569 461 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 ZNF597Q96LX8 424 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 C1orf147Q96MC9 270 aaPredicted RBP3.14□□□□□ -1.91
SCFD1-210ENST00000553693 FAM218AQ96MZ4 157 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 ZNF830Q96NB3 372 aaPredicted RBP3.14□□□□□ -1.91
SCFD1-210ENST00000553693 GOLPH3LQ9H4A5 285 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 NOL11Q9H8H0 719 aaKnown RBP3.14□□□□□ -1.91
SCFD1-210ENST00000553693 PIH1D3Q9NQM4 214 aaKnown RBP3.14□□□□□ -1.91
SCFD1-210ENST00000553693 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.14□□□□□ -1.91
SCFD1-210ENST00000553693 PRDM4Q9UKN5 801 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 CFAP65Q6ZU64 1925 aaKnown RBP3.14□□□□□ -1.91
SCFD1-210ENST00000553693 PIK3C2BO00750 1634 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 AHDC1Q5TGY3 1603 aaPredicted RBP3.14□□□□□ -1.91
SCFD1-210ENST00000553693 MROH1Q8NDA8 1641 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 NKTRP30414 1462 aaKnown RBP3.14□□□□□ -1.91
SCFD1-210ENST00000553693 CCDC141Q6ZP82 1450 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 FYCO1Q9BQS8 1478 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 EP400Q96L91 3159 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 NWD1Q149M9 1564 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 MAST1Q9Y2H9 1570 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 SETD5Q9C0A6 1442 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 TRBV4-1A0A0J9YWV2 114 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 SHISA7A6NL88 538 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 TRAFD1O14545 582 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-210ENST00000553693 GPRIN2O60269 458 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 SNAP91O60641 907 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 ABCB1P08183 1280 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-210ENST00000553693 SAGP10523 405 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-210ENST00000553693 MYOGP15173 224 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 ETV5P41161 510 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 DCDC1P59894 354 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 CD300CQ08708 224 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 SRSF9Q13242 221 aaKnown RBP eCLIP3.13□□□□□ -1.91
SCFD1-210ENST00000553693 OPCMLQ14982 345 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 C3P1Q6ZMU1 363 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 SLC24A5Q71RS6 500 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 RNF130Q86XS8 419 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 FAM9BQ8IZU0 186 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 DGAT2Q96PD7 388 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 ZNF577Q9BSK1 485 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 CHORDC1Q9UHD1 332 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-210ENST00000553693 CAMSAP2Q08AD1 1489 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 KDM5AP29375 1690 aaKnown RBP3.13□□□□□ -1.91
SCFD1-210ENST00000553693 EFCAB6Q5THR3 1501 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 CEP152O94986 1710 aa3.13□□□□□ -1.91
SCFD1-210ENST00000553693 PNPLA6Q8IY17 1366 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 ARHGAP31Q2M1Z3 1444 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 NCOA3Q9Y6Q9 1424 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 ATRXP46100 2492 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 IGLV4-3A0A075B6K6 122 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 TRIM49BA6NDI0 452 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 SHISA9B4DS77 424 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 CCER2I3L3R5 266 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 SNX3O60493 162 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 GP9P14770 177 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 EPCAMP16422 314 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 CETN2P41208 172 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 RAD52P43351 418 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 FGD3Q5JSP0 725 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 SPECC1Q5M775 1068 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 DET1Q7L5Y6 550 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 ADCK1Q86TW2 530 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 GPC2Q8N158 579 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 GPD1LQ8N335 351 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 RASGEF1AQ8N9B8 481 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 SUMF1Q8NBK3 374 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 PDE7BQ9NP56 450 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 GSN-AS1Q9NRJ2 163 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 HAO2Q9NYQ3 351 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 NLGN3Q9NZ94 848 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 PCDHGB4Q9UN71 923 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.12□□□□□ -1.91
SCFD1-210ENST00000553693 CHD2O14647 1828 aaKnown RBP3.12□□□□□ -1.91
SCFD1-210ENST00000553693 PLEKHG1Q9ULL1 1385 aa3.12□□□□□ -1.91
SCFD1-210ENST00000553693 ATRNO75882 1429 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 CEP162Q5TB80 1403 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 PRRC2AP48634 2157 aaKnown RBP3.11□□□□□ -1.91
SCFD1-210ENST00000553693 ASXL1Q8IXJ9 1541 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 CASTOR2A6NHX0 329 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 NPIPB9F8W1W9 429 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 G3V2L1 256 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 TRIM77I1YAP6 450 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 PTGESO14684 152 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 PHOX2AO14813 284 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 RPS6KA5O75582 802 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 NXPH4O95158 308 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 DUX4L4P0CJ87 422 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 CD22P20273 847 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 EEF1B2P24534 225 aaKnown RBP3.11□□□□□ -1.91
SCFD1-210ENST00000553693 CD27P26842 260 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 PCGF2P35227 344 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 CLCN4P51793 760 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 PRPF4BQ13523 1007 aaKnown RBP3.11□□□□□ -1.91
SCFD1-210ENST00000553693 PTPRCAPQ14761 206 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 EIPR1Q53HC9 387 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 CEACAM19Q7Z692 300 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 KCNMB4Q86W47 210 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 TEKT4Q8WW24 435 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms