RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 PHOX2BQ99453 314 aa13.42□□□□□ -0.26
SCNN1A-215ENST00000540037 RERGLQ9H628 205 aa13.42□□□□□ -0.26
SCNN1A-215ENST00000540037 CLEC2DQ9UHP7 191 aa13.42□□□□□ -0.26
SCNN1A-215ENST00000540037 NINQ8N4C6 2090 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 CCDC88CQ9P219 2028 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 RPS3P23396 243 aaKnown RBP eCLIP13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 AOAHP28039 575 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 POU1F1P28069 291 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 HNF1BP35680 557 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 STARD3Q14849 445 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 FAM209AQ5JX71 171 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 FRG2Q64ET8 278 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 KLHL17Q6TDP4 642 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 RNF165Q6ZSG1 346 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 WDR53Q7Z5U6 358 aaPredicted RBP13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 WDR36Q8NI36 951 aaKnown RBP13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 FRG2BQ96QU4 278 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 RAD9AQ99638 391 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 DOHHQ9BU89 302 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 SMURF1Q9HCE7 757 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 SNTG1Q9NSN8 517 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 RGS17Q9UGC6 210 aaPredicted RBP13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 NUFIP1Q9UHK0 495 aaKnown RBP13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 DNMT3LQ9UJW3 386 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 V9GYH0 126 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 GLYATL1P3A0A0U1RQE8 302 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 GABRR3A8MPY1 467 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 COCHO43405 550 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 ETHE1O95571 254 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 ETFAP13804 333 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 ITGALP20701 1170 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 PRPS1L1P21108 318 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 DSC1Q08554 894 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 CHIT1Q13231 466 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 RGNQ15493 299 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 ARMC4Q5T2S8 1044 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 GLB1LQ6UWU2 654 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 BCDIN3DQ7Z5W3 292 aaKnown RBP13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 FOXJ1Q92949 421 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 DHRS1Q96LJ7 313 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 IL4I1Q96RQ9 567 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 PARK7Q99497 189 aaKnown RBP13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 P2RY13Q9BPV8 354 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 CHST8Q9H2A9 424 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 ABCB8Q9NUT2 735 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 GPATCH2Q9NW75 528 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 PCDHB11Q9Y5F2 797 aa13.41□□□□□ -0.26
SCNN1A-215ENST00000540037 PNMA8CA0A1B0GUJ8 204 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 A0A1W2PQ09 198 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 MEIOCA2RUB1 952 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 CSF2P04141 144 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 IGFBP1P08833 259 aaPredicted RBP13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 CHRNB1P11230 501 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 HOXB6P17509 224 aaKnown RBP13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 ETV6P41212 452 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 CRATP43155 626 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 CCL23P55773 120 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 GALK2Q01415 458 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 PTGES3Q15185 160 aaKnown RBP13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 HKDC1Q2TB90 917 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 LEXMQ3ZCV2 418 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 MFSD4BQ5TF39 518 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 MLIPQ5VWP3 458 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 ERICH5Q6P6B1 374 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 NLRP8Q86W28 1048 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 CHCHD4Q8N4Q1 142 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 GPR26Q8NDV2 337 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 COQ8BQ96D53 544 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 SNX18Q96RF0 628 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 ASPNQ9BXN1 380 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 TRIM39Q9HCM9 518 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 CCRL2O00421 344 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 MTX2O75431 263 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 STC2O76061 302 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 SLITRK5O94991 958 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 SNX4O95219 450 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 TRBC1P01850 177 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 GBAP04062 536 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 ZDHHC11BP0C7U3 371 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 GATMP50440 423 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 B4GALNT1Q00973 533 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 MRPL58Q14197 206 aaKnown RBP13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 TRIM60Q495X7 471 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 FBXO43Q4G163 708 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 LRRC73Q5JTD7 316 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 SLC44A2Q8IWA5 706 aaPredicted RBP13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 OR4K1Q8NGD4 311 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 PIK3R3Q92569 461 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 TCF25Q9BQ70 676 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 RDH14Q9HBH5 336 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 ACSL6Q9UKU0 697 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 PADI2Q9Y2J8 665 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 KLHL20Q9Y2M5 609 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 KLK4Q9Y5K2 254 aa13.4□□□□□ -0.26
SCNN1A-215ENST00000540037 SLC38A8A6NNN8 435 aa13.39□□□□□ -0.27
SCNN1A-215ENST00000540037 HOXD11P31277 338 aaPredicted RBP13.39□□□□□ -0.27
SCNN1A-215ENST00000540037 SSTR4P31391 388 aa13.39□□□□□ -0.27
SCNN1A-215ENST00000540037 KRR1Q13601 381 aaKnown RBP13.39□□□□□ -0.27
SCNN1A-215ENST00000540037 BOP1Q14137 746 aaKnown RBP13.39□□□□□ -0.27
SCNN1A-215ENST00000540037 SMUG1Q53HV7 270 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms