RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 MACROD1Q9BQ69 325 aa18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 SIKE1Q9BRV8 207 aa18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 PRM3Q9NNZ6 103 aa18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 GOLGA8QA0A0J9YX86 632 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 GOLGA8OA6NCC3 632 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 GOLGA8NF8WBI6 632 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 SLC28A1O00337 649 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 SNX3O60493 162 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 DIAPH2O60879 1101 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 CLEC3AO75596 197 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 SERPIND1P05546 499 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 CTSBP07858 339 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 GSTM2P28161 218 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 SERPINB1P30740 379 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 PHEXP78562 749 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 CSTF3Q12996 717 aaKnown RBP18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 SPATA21Q7Z572 469 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 PIGWQ7Z7B1 504 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 ASPGQ86U10 573 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 GBP7Q8N8V2 638 aaPredicted RBP18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 TRPV3Q8NET8 790 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 ADAMTS14Q8WXS8 1223 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 TM4SF19Q96DZ7 209 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 SEC16BQ96JE7 1060 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 CCT7Q99832 543 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 TMEM121BQ9BXQ6 578 aaPredicted RBP18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 MS4A8Q9BY19 250 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 OR51B5Q9H339 312 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 BRF2Q9HAW0 419 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 GIMAP2Q9UG22 337 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 KLK13Q9UKR3 277 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 PLCL2Q9UPR0 1127 aa18.06■□□□□ 0.48
TNFRSF1A-213ENST00000540022 AGRPO00253 132 aa18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 P2RX6O15547 441 aa18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 NDUFS4O43181 175 aa18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 MAP3K7O43318 606 aa18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 HSD3B1P14060 373 aa18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 FOLR1P15328 257 aa18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 HSD3B2P26439 372 aa18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 VSX2P58304 361 aaPredicted RBP18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 HYAL2Q12891 473 aa18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 IMPG1Q17R60 797 aa18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 RBM44Q6ZP01 1051 aaKnown RBP18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 C10orf82Q8WW14 230 aa18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 SLC13A3Q8WWT9 602 aa18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 OR52B2Q96RD2 323 aa18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 TMEM120AQ9BXJ8 343 aa18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 AICDAQ9GZX7 198 aa18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 PFDN4Q9NQP4 134 aa18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 PSD3Q9NYI0 1048 aa18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 PPT2Q9UMR5 302 aa18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 SLC12A4Q9UP95 1085 aa18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 APOBEC2Q9Y235 224 aaKnown RBP18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 KMT2BQ9UMN6 2715 aaPredicted RBP18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 PCM1Q15154 2024 aa18.05■□□□□ 0.48
TNFRSF1A-213ENST00000540022 RGS14O43566 566 aa18.04■□□□□ 0.48
TNFRSF1A-213ENST00000540022 EIF2S1P05198 315 aaKnown RBP18.04■□□□□ 0.48
TNFRSF1A-213ENST00000540022 ARFIP2P53365 341 aa18.04■□□□□ 0.48
TNFRSF1A-213ENST00000540022 TRA2AQ13595 282 aaKnown RBP eCLIP18.04■□□□□ 0.48
TNFRSF1A-213ENST00000540022 C16orf72Q14CZ0 275 aa18.04■□□□□ 0.48
TNFRSF1A-213ENST00000540022 NR6A1Q15406 480 aa18.04■□□□□ 0.48
TNFRSF1A-213ENST00000540022 GPR19Q15760 415 aa18.04■□□□□ 0.48
TNFRSF1A-213ENST00000540022 CDCP2Q5VXM1 449 aa18.04■□□□□ 0.48
TNFRSF1A-213ENST00000540022 MARCH9Q86YJ5 346 aa18.04■□□□□ 0.48
TNFRSF1A-213ENST00000540022 RERGQ96A58 199 aaPredicted RBP18.04■□□□□ 0.48
TNFRSF1A-213ENST00000540022 TUBGCP3Q96CW5 907 aa18.04■□□□□ 0.48
TNFRSF1A-213ENST00000540022 CMTM7Q96FZ5 175 aa18.04■□□□□ 0.48
TNFRSF1A-213ENST00000540022 AKTIPQ9H8T0 292 aa18.04■□□□□ 0.48
TNFRSF1A-213ENST00000540022 RIC8BQ9NVN3 520 aa18.04■□□□□ 0.48
TNFRSF1A-213ENST00000540022 NEUROG3Q9Y4Z2 214 aa18.04■□□□□ 0.48
TNFRSF1A-213ENST00000540022 FREM2Q5SZK8 3169 aa18.04■□□□□ 0.48
TNFRSF1A-213ENST00000540022 SNRNP200O75643 2136 aaKnown RBP18.04■□□□□ 0.48
TNFRSF1A-213ENST00000540022 LRIT2A6NDA9 550 aa18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 LSM1O15116 133 aaKnown RBP18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 SRPX2O60687 465 aaPredicted RBP18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 SERPINA6P08185 405 aa18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 PRR35P0CG20 571 aa18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 PTX3P26022 381 aaPredicted RBP18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 HNRNPH1P31943 449 aaKnown RBP18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 PWP1Q13610 501 aa18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 HKDC1Q2TB90 917 aa18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 ADPRMQ3LIE5 342 aa18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 LSM12Q3MHD2 195 aaKnown RBP18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 TMTC4Q5T4D3 741 aa18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 DEPDC1Q5TB30 811 aa18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 KHDRBS2Q5VWX1 349 aaKnown RBP18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 LARP4Q71RC2 724 aaKnown RBP eCLIP18.03■□□□□ 0.481e-7■□□□□ 11.3
TNFRSF1A-213ENST00000540022 KCT2Q8NC54 265 aa18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 NT5CQ8TCD5 201 aa18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 BCAS4Q8TDM0 211 aa18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 GATA6Q92908 595 aa18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 ZNF285Q96NJ3 590 aa18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 TMEM74Q96NL1 305 aa18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 F2RL3Q96RI0 385 aa18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 SERPINI1Q99574 410 aa18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 MRPL1Q9BYD6 325 aaKnown RBP18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 SLC6A16Q9GZN6 736 aa18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 KLHL31Q9H511 634 aa18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 VPS29Q9UBQ0 182 aa18.03■□□□□ 0.48
TNFRSF1A-213ENST00000540022 C1QTNF9BB2RNN3 333 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms