RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 PRPF4O43172 522 aaKnown RBP eCLIP12.99□□□□□ -0.33
CD9-208ENST00000538834 OR1F1O43749 312 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 GALR3O60755 368 aaPredicted RBP12.99□□□□□ -0.33
CD9-208ENST00000538834 BMP10O95393 424 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 SERPINA6P08185 405 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 NCF1P14598 390 aaPredicted RBP12.99□□□□□ -0.33
CD9-208ENST00000538834 ALDH18A1P54886 795 aaKnown RBP12.99□□□□□ -0.33
CD9-208ENST00000538834 KLC1Q07866 573 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 ATP1A4Q13733 1029 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 DOC2AQ14183 400 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 NDUFA9Q16795 377 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 VWA2Q5GFL6 755 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 TEX35Q5T0J7 233 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 CPZQ66K79 652 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 WDR93Q6P2C0 686 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 TMEM205Q6UW68 189 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 KIRREL2Q6UWL6 708 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 TMPRSS11BQ86T26 416 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 TDRPQ86YL5 185 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 ZC3H7AQ8IWR0 971 aaKnown RBP12.99□□□□□ -0.33
CD9-208ENST00000538834 METTL27Q8N6F8 245 aaPredicted RBP12.99□□□□□ -0.33
CD9-208ENST00000538834 TRPV3Q8NET8 790 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 OR9A4Q8NGU2 314 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 UTP15Q8TED0 518 aaKnown RBP12.99□□□□□ -0.33
CD9-208ENST00000538834 MTBPQ96DY7 904 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 ABHD17AQ96GS6 310 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 C1QTNF3Q9BXJ4 246 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 ING2Q9H160 280 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 CLK4Q9HAZ1 481 aaKnown RBP12.99□□□□□ -0.33
CD9-208ENST00000538834 SEMA3GQ9NS98 782 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 P4HTMQ9NXG6 502 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 WWOXQ9NZC7 414 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 CROCCQ5TZA2 2017 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 NBASA2RRP1 2371 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 K7EPI3 171 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 AGPSO00116 658 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 PCDH17O14917 1159 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 DNAJB5O75953 348 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 IGHEP01854 428 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 STATHP02808 62 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 PDGFAP04085 211 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 SLC35G6P0C7Q6 338 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 FBLP22087 321 aaKnown RBP12.98□□□□□ -0.33
CD9-208ENST00000538834 CXCR2P25025 360 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 PDK4Q16654 411 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 SYT16Q17RD7 645 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 TSNAXIP1Q2TAA8 658 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 DCAF10Q5QP82 559 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 TMIGD1Q6UXZ0 262 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 LCA5Q86VQ0 697 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 LAS2Q8IYD9 372 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 COL26A1Q96A83 441 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 PTCD3Q96EY7 689 aaKnown RBP12.98□□□□□ -0.33
CD9-208ENST00000538834 MMABQ96EY8 250 aaPredicted RBP12.98□□□□□ -0.33
CD9-208ENST00000538834 MESP1Q9BRJ9 268 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 KLHL31Q9H511 634 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 C14orf105Q9NVL8 296 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 PCDHGB7Q9Y5F8 929 aa12.98□□□□□ -0.33
CD9-208ENST00000538834 LRIT2A6NDA9 550 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 B8ZZF3 427 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 STX16-NPEPL1H3BU86 382 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 E2F3O00716 465 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 STX16O14662 325 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 DNAJB6O75190 326 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 CLEC3AO75596 197 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 SHBGP04278 402 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 RBP1P09455 135 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 ALOX12P18054 663 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 IL1RNP18510 177 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 IL10P22301 178 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 GLRBP48167 497 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 VSNL1P62760 191 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 OCA2Q04671 838 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 HERC3Q15034 1050 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 TAOK1Q7L7X3 1001 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.97□□□□□ -0.33
CD9-208ENST00000538834 TTLQ8NG68 377 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 OR11G2Q8NGC1 345 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 ACMSDQ8TDX5 336 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 AENQ8WTP8 325 aaKnown RBP12.97□□□□□ -0.33
CD9-208ENST00000538834 MIEF2Q96C03 454 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 QRFPRQ96P65 431 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 SMAD5Q99717 465 aaKnown RBP12.97□□□□□ -0.33
CD9-208ENST00000538834 ARHGAP9Q9BRR9 750 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 EFCAB11Q9BUY7 163 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 VPS11Q9H270 941 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 SOX17Q9H6I2 414 aaPredicted RBP12.97□□□□□ -0.33
CD9-208ENST00000538834 LANCL2Q9NS86 450 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 IKBKGQ9Y6K9 419 aa12.97□□□□□ -0.33
CD9-208ENST00000538834 GCN1Q92616 2671 aaKnown RBP12.97□□□□□ -0.33
CD9-208ENST00000538834 LRRC14BA6NHZ5 514 aa12.96□□□□□ -0.33
CD9-208ENST00000538834 ARGFXA6NJG6 315 aa12.96□□□□□ -0.33
CD9-208ENST00000538834 IDSB3KWA1 339 aa12.96□□□□□ -0.33
CD9-208ENST00000538834 SGK494L7N484 410 aa12.96□□□□□ -0.33
CD9-208ENST00000538834 CLGNO14967 610 aa12.96□□□□□ -0.33
CD9-208ENST00000538834 NDUFS4O43181 175 aa12.96□□□□□ -0.33
CD9-208ENST00000538834 UGDHO60701 494 aa12.96□□□□□ -0.33
CD9-208ENST00000538834 H2AFYO75367 372 aaKnown RBP12.96□□□□□ -0.33
CD9-208ENST00000538834 KLHL18O94889 574 aa12.96□□□□□ -0.33
CD9-208ENST00000538834 SLU7O95391 586 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms