RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 SSU72Q9NP77 194 aaKnown RBP12.31□□□□□ -0.44
SMPD1-202ENST00000526280 SEMA4BQ9NPR2 832 aaPredicted RBP12.31□□□□□ -0.44
SMPD1-202ENST00000526280 OXSMQ9NWU1 459 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 SLC17A7Q9P2U7 560 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 NDOR1Q9UHB4 597 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 MID2Q9UJV3 735 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 CROTQ9UKG9 612 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 ACTL7BQ9Y614 415 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 ZFHX4Q86UP3 3567 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 LAMA5O15230 3695 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 C21orf140B9A014 251 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 EFSO43281 561 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 FOXS1O43638 330 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 SUPT7LO94864 414 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 CLDN9O95484 217 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 SERPIND1P05546 499 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 CAPN1P07384 714 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 SERPINA6P08185 405 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 LIFP15018 202 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 F8A1P23610 371 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 ITPKBP27987 946 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 DLSTP36957 453 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 SNRPNP63162 240 aaKnown RBP12.3□□□□□ -0.44
SMPD1-202ENST00000526280 CYP4F2P78329 520 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 CLCQ05315 142 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 RGS1Q08116 209 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 HYAL2Q12891 473 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 SRSF6Q13247 344 aaKnown RBP12.3□□□□□ -0.44
SMPD1-202ENST00000526280 NDUFA9Q16795 377 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 TTMPQ5BVD1 217 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 MED27Q6P2C8 311 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 PRMT9Q6P2P2 845 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 VN1R5Q7Z5H4 357 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 LAS2Q8IYD9 372 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 DTWD1Q8N5C7 304 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 OR52B6Q8NGF0 335 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 PPP4R1Q8TF05 950 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 ATP6V1E2Q96A05 226 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 KIAA1143Q96AT1 154 aaPredicted RBP12.3□□□□□ -0.44
SMPD1-202ENST00000526280 FAM111AQ96PZ2 611 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 GPR87Q9BY21 358 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 FAM117AQ9C073 453 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 SLC6A16Q9GZN6 736 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 STMN4Q9H169 189 aaPredicted RBP12.3□□□□□ -0.44
SMPD1-202ENST00000526280 GPN2Q9H9Y4 310 aaPredicted RBP12.3□□□□□ -0.44
SMPD1-202ENST00000526280 ACSS2Q9NR19 701 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 SLC22A11Q9NSA0 550 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 WDR70Q9NW82 654 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 CDC14AQ9UNH5 594 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 MRPS2Q9Y399 296 aaKnown RBP12.3□□□□□ -0.44
SMPD1-202ENST00000526280 RNF11Q9Y3C5 154 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 TSC22D4Q9Y3Q8 395 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 PCDHGA6Q9Y5G7 932 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 SLC22A7Q9Y694 548 aa12.3□□□□□ -0.44
SMPD1-202ENST00000526280 ZZEF1O43149 2961 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 CFAP47Q6ZTR5 3102 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 A0A1B0GTL3 188 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 ANKDD1BA6NHY2 528 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 GOLGA6L10A6NI86 522 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 H0YIV9 168 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 PPP6CO00743 305 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 CLEC3AO75596 197 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 OTCP00480 354 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 RAB40ALP0C0E4 278 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 PIM1P11309 404 aaPredicted RBP12.29□□□□□ -0.44
SMPD1-202ENST00000526280 TSPAN8P19075 237 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 OR1D4P47884 311 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 NAGLUP54802 743 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 TRAF3Q13114 568 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 DNASE1L3Q13609 305 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 PCLAFQ15004 111 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 BROXQ5VW32 411 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 ADNP2Q6IQ32 1131 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 FAM198BQ6UWH4 519 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 MILR1Q7Z6M3 343 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 MYLK4Q86YV6 388 aaPredicted RBP12.29□□□□□ -0.44
SMPD1-202ENST00000526280 C10orf107Q8IVU9 208 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 AFAP1L2Q8N4X5 818 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 OR7G3Q8NG95 312 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 TRPC4APQ8TEL6 797 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.29□□□□□ -0.44
SMPD1-202ENST00000526280 CDK15Q96Q40 435 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 C17orf62Q9BQA9 187 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 EFHD1Q9BUP0 239 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 DRC3Q9H069 523 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 ZNF304Q9HCX3 659 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 IL17BQ9UHF5 180 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 KCND3Q9UK17 655 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 PCDHGA11Q9Y5H2 935 aa12.29□□□□□ -0.44
SMPD1-202ENST00000526280 PTPRQQ9UMZ3 2332 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 A0A0A6YYC8 382 aaPredicted RBP12.28□□□□□ -0.44
SMPD1-202ENST00000526280 LRIT2A6NDA9 550 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 C9J4A7 227 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 I3L1I5 382 aaPredicted RBP12.28□□□□□ -0.44
SMPD1-202ENST00000526280 PRPF4O43172 522 aaKnown RBP eCLIP12.28□□□□□ -0.44
SMPD1-202ENST00000526280 NSA2O95478 260 aaKnown RBP12.28□□□□□ -0.44
SMPD1-202ENST00000526280 MLYCDO95822 493 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 TBX6O95947 436 aaPredicted RBP12.28□□□□□ -0.44
SMPD1-202ENST00000526280 SMIM10L1P0DMW3 83 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 WT1P19544 449 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms