RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 CLIP3Q96DZ5 547 aa6.71□□□□□ -1.33
TGFBR3-207ENST00000525962 HDHD5Q9BXW7 423 aa6.71□□□□□ -1.33
TGFBR3-207ENST00000525962 TMEM248Q9NWD8 314 aa6.71□□□□□ -1.33
TGFBR3-207ENST00000525962 NLKQ9UBE8 527 aa6.71□□□□□ -1.33
TGFBR3-207ENST00000525962 SNX7Q9UNH6 387 aa6.71□□□□□ -1.33
TGFBR3-207ENST00000525962 ERVK-11Q9UQG0 969 aa6.71□□□□□ -1.33
TGFBR3-207ENST00000525962 SPAG17Q6Q759 2223 aa6.71□□□□□ -1.33
TGFBR3-207ENST00000525962 LY75O60449 1722 aa6.71□□□□□ -1.33
TGFBR3-207ENST00000525962 DNAJC25-GNG10A0A024R161 153 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 H0YJX3 145 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 E2F3O00716 465 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 NUPL2O15504 423 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 KLHL18O94889 574 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 URODP06132 367 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 FGF4P08620 206 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 BMP1P13497 986 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 PRG2P13727 222 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 SPNP16150 400 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 ITGA2P17301 1181 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 CSTF2P33240 577 aaKnown RBP eCLIP6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 RYKP34925 604 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 HNF1BP35680 557 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 EPHB3P54753 998 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 TAS2R50P59544 299 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 MVKQ03426 396 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 FOXM1Q08050 763 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 ABHD18Q0P651 414 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 SEMA3BQ13214 749 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 TUBA3CQ13748 450 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 ZNF267Q14586 743 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 SUZ12Q15022 739 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 WSCD2Q2TBF2 565 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 GCNT6Q5T4J0 391 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 ADNP2Q6IQ32 1131 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 BHLHB9Q6PI77 547 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 RNF44Q7L0R7 432 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 SPRED1Q7Z699 444 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 APCDD1Q8J025 514 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 CYP4Z2PQ8N1L4 340 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 RHEBL1Q8TAI7 183 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 SLC9A6Q92581 669 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 ARSGQ96EG1 525 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 ALOXE3Q9BYJ1 711 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 SLC32A1Q9H598 525 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 KLHL28Q9NXS3 571 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 MRPL15Q9P015 296 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 DHRS7Q9Y394 339 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 DOCK5Q9H7D0 1870 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 ASPDHA6ND91 283 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 H7C4K7 107 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 MATN4O95460 622 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 CPN2P22792 545 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 CNR2P34972 360 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 AVPR1BP47901 424 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 ATP4BP51164 291 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 AP2S1P53680 142 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 CDH4P55283 916 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 ITGA1P56199 1179 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 FBXW4P57775 412 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 PURAQ00577 322 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 C10orf62Q5T681 223 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 FAAH2Q6GMR7 532 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 TMEM220Q6QAJ8 160 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 HACD2Q6Y1H2 254 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 METTL4Q8N3J2 472 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 PARP16Q8N5Y8 322 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 ASCC1Q8N9N2 400 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 KCT2Q8NC54 265 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 FBXO22Q8NEZ5 403 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 KCNJ9Q92806 393 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 ZNF486Q96H40 463 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 C8orf48Q96LL4 319 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 NEDD4LQ96PU5 975 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 OR5M11Q96RB7 305 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 MACROD1Q9BQ69 325 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 EMILIN2Q9BXX0 1053 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 ACPTQ9BZG2 426 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 MED28Q9H204 178 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 ELAC1Q9H777 363 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 ACOT13Q9NPJ3 140 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 NANSQ9NR45 359 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 PLSCR3Q9NRY6 295 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 VNN3Q9NY84 501 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 ING4Q9UNL4 249 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 GPSM3Q9Y4H4 160 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 PCDHGB6Q9Y5F9 930 aa6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 COL5A3P25940 1745 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-207ENST00000525962 A0A0U1RQF3 1178 aa6.7□□□□□ -1.34
TGFBR3-207ENST00000525962 COCHO43405 550 aa6.7□□□□□ -1.34
TGFBR3-207ENST00000525962 FRS3O43559 492 aa6.7□□□□□ -1.34
TGFBR3-207ENST00000525962 UGT2B17O75795 530 aa6.7□□□□□ -1.34
TGFBR3-207ENST00000525962 PTHP01270 115 aa6.7□□□□□ -1.34
TGFBR3-207ENST00000525962 RPS17P08708 135 aaKnown RBP6.7□□□□□ -1.34
TGFBR3-207ENST00000525962 IGFBP1P08833 259 aaPredicted RBP6.7□□□□□ -1.34
TGFBR3-207ENST00000525962 TIE1P35590 1138 aa6.7□□□□□ -1.34
TGFBR3-207ENST00000525962 HTR2BP41595 481 aa6.7□□□□□ -1.34
TGFBR3-207ENST00000525962 CCR4P51679 360 aa6.7□□□□□ -1.34
TGFBR3-207ENST00000525962 SNRPD1P62314 119 aaKnown RBP6.7□□□□□ -1.34
TGFBR3-207ENST00000525962 ADARB1P78563 741 aaKnown RBP6.7□□□□□ -1.34
TGFBR3-207ENST00000525962 KCNC4Q03721 635 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms