RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 PRPHP41219 470 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 TSFMP43897 325 aaKnown RBP3.16□□□□□ -1.9
VPS13B-207ENST00000518569 DCDC1P59894 354 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 IFT88Q13099 833 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 DRP2Q13474 957 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 CDH18Q13634 790 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 E2F5Q15329 346 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 MTHFSDQ2M296 383 aaKnown RBP3.16□□□□□ -1.9
VPS13B-207ENST00000518569 FGD3Q5JSP0 725 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 MPP7Q5T2T1 576 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 TTC27Q6P3X3 843 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 CYB5D1Q6P9G0 228 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 ZNF613Q6PF04 617 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 C11orf88Q6PI97 169 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 BTNL8Q6UX41 500 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 TMEM182Q6ZP80 229 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-207ENST00000518569 Q6ZRP5 223 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 APCDD1Q8J025 514 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 OR8H3Q8N146 312 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 LRTM2Q8N967 370 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 SPATA18Q8TC71 538 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 CORO2AQ92828 525 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 MOCOSQ96EN8 888 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 ZNF300Q96RE9 604 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-207ENST00000518569 MLPHQ9BV36 600 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-207ENST00000518569 FGFBP2Q9BYJ0 223 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 HOXD1Q9GZZ0 328 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 ABCG4Q9H172 646 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 UBQLN3Q9H347 655 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 C10orf88Q9H8K7 445 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 MTHFD2LQ9H903 347 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-207ENST00000518569 MED20Q9H944 212 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 IARS2Q9NSE4 1012 aaKnown RBP3.16□□□□□ -1.9
VPS13B-207ENST00000518569 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.16□□□□□ -1.9
VPS13B-207ENST00000518569 TBC1D13Q9NVG8 400 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 ASIC3Q9UHC3 531 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 GTF3C4Q9UKN8 822 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 RRP15Q9Y3B9 282 aaKnown RBP3.16□□□□□ -1.9
VPS13B-207ENST00000518569 ANGPTL3Q9Y5C1 460 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 POMT1Q9Y6A1 747 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 RNF215Q9Y6U7 377 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 NPHP3Q7Z494 1330 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 ARID2Q68CP9 1835 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 TRAV18A0A075B6X5 111 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 MTMR11A4FU01 709 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 NTN3O00634 580 aaPredicted RBP3.15□□□□□ -1.91
VPS13B-207ENST00000518569 MAGEC1O60732 1142 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 B3GALNT1O75752 331 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 SERPINB2P05120 415 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 ZNF883P0CG24 379 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 EEF2P13639 858 aaKnown RBP3.15□□□□□ -1.91
VPS13B-207ENST00000518569 MYOGP15173 224 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 AADACP22760 399 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 PSMB4P28070 264 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 HPDP32754 393 aaPredicted RBP3.15□□□□□ -1.91
VPS13B-207ENST00000518569 SOAT1P35610 550 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 KRT2P35908 639 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 OPRL1P41146 370 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 SOX3P41225 446 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 PRKCIP41743 596 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 OR3A3P47888 321 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 LBX1P52954 281 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 XGP55808 180 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 CLDN17P56750 224 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 OR1D5P58170 312 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 TRA2AQ13595 282 aaKnown RBP eCLIP3.15□□□□□ -1.91
VPS13B-207ENST00000518569 TMEM132DQ14C87 1099 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 FAM47EQ6ZV65 393 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 CCDC91Q7Z6B0 441 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 KRTAP7-1Q8IUC3 87 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 SIX6OS1Q8N1H7 587 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 OR4D10Q8NGI6 311 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 OR4C15Q8NGM1 316 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 CHURC1Q8WUH1 139 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 RIT1Q92963 219 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 MR1Q95460 341 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 ST6GALNAC6Q969X2 333 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 ZNF486Q96H40 463 aaPredicted RBP3.15□□□□□ -1.91
VPS13B-207ENST00000518569 TRIM51Q9BSJ1 452 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 DGCR6LQ9BY27 220 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 GFRA4Q9GZZ7 299 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 MINDY3Q9H8M7 445 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 PHPT1Q9NRX4 125 aaPredicted RBP3.15□□□□□ -1.91
VPS13B-207ENST00000518569 MRGBPQ9NV56 204 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 EXOC1Q9NV70 894 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 PANK4Q9NVE7 773 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 UTP6Q9NYH9 597 aaKnown RBP3.15□□□□□ -1.91
VPS13B-207ENST00000518569 MTRRQ9UBK8 725 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 PCSK1NQ9UHG2 260 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 SLC12A6Q9UHW9 1150 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 PILRBQ9UKJ0 227 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 CDH7Q9ULB5 785 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 KNSTRNQ9Y448 316 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 KLK4Q9Y5K2 254 aa3.15□□□□□ -1.91
VPS13B-207ENST00000518569 IGKV3D-15A0A087WSY6 115 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 A0A0B4J203 849 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 TRBV4-1A0A0J9YWV2 114 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 OOEPA6NGQ2 149 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 NKX6-3A6NJ46 265 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms