RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 CENPOQ9BU64 300 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 SLC25A23Q9BV35 468 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 Q9H8V8 135 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 GSN-AS1Q9NRJ2 163 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 CLIC5Q9NZA1 410 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 GOLGA3Q08378 1498 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 CAMSAP2Q08AD1 1489 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 TIAM1Q13009 1591 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 SAMD9LQ8IVG5 1584 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 TRBV5-5A0A0J9YX44 114 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 URADA6NGE7 173 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 ASB14A6NK59 587 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 A8MXE2 369 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 SNURFLB1AK76 121 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 FPGTO14772 594 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 AP5Z1O43299 807 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 BCL2L11O43521 198 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 SNX3O60493 162 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 DIAPH2O60879 1101 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 SLCO2B1O94956 709 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 CSN3P07498 182 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 KRTAP1-4P0C5Y4 121 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 RPL35AP18077 110 aaKnown RBP3.13□□□□□ -1.91
LINC01088-211ENST00000515597 HSPA4P34932 840 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 HSD17B3P37058 310 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 LBX1P52954 281 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 IRX4P78413 519 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 MYL7Q01449 175 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 TRAP1Q12931 704 aaKnown RBP3.13□□□□□ -1.91
LINC01088-211ENST00000515597 COG2Q14746 738 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 TAB1Q15750 504 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 SLC25A30Q5SVS4 291 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 CES4AQ5XG92 561 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 CCDC186Q7Z3E2 898 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 ZNF584Q8IVC4 421 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 SLC39A11Q8N1S5 342 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 CAMKVQ8NCB2 501 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 SLC37A3Q8NCC5 494 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 OR10Q1Q8NGQ4 319 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 MRPS27Q92552 414 aaKnown RBP3.13□□□□□ -1.91
LINC01088-211ENST00000515597 VPS33AQ96AX1 596 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 RMDN2Q96LZ7 410 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 HOXD1Q9GZZ0 328 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 GNB4Q9HAV0 340 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 PFDN4Q9NQP4 134 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 CFDP1Q9UEE9 299 aaPredicted RBP3.13□□□□□ -1.91
LINC01088-211ENST00000515597 CCL27Q9Y4X3 112 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 R4GN57 208 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 A2MP01023 1474 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 PZPP20742 1482 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 CTTNBP2Q8WZ74 1663 aa3.13□□□□□ -1.91
LINC01088-211ENST00000515597 SAMD9Q5K651 1589 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 KDM5AP29375 1690 aaKnown RBP3.12□□□□□ -1.91
LINC01088-211ENST00000515597 IGLV3-10A0A075B6K4 115 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 TRAV24A0A0B4J272 114 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 CASTOR2A6NHX0 329 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 SHISA7A6NL88 538 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 C2CD4DB7Z1M9 353 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 TBX10O75333 385 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 HPRP00739 348 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 THEGLP0DJG4 465 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 CDC25CP30307 473 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 PPP5CP53041 499 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 LIMK2P53671 638 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 ILF2Q12905 390 aaKnown RBP3.12□□□□□ -1.91
LINC01088-211ENST00000515597 SGCGQ13326 291 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 CAMK2DQ13557 499 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 CDH18Q13634 790 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 RPUSD3Q6P087 351 aaKnown RBP3.12□□□□□ -1.91
LINC01088-211ENST00000515597 GDPGP1Q6ZNW5 385 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 SLC47A2Q86VL8 602 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 ZFAND4Q86XD8 727 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 METTL4Q8N3J2 472 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 OR7A2PQ8NGA2 310 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 OR5T2Q8NGG2 359 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 EXT2Q93063 718 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 FAM218AQ96MZ4 157 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 LGMNQ99538 433 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 CCDC3Q9BQI4 270 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 TDRD1Q9BXT4 1180 aaKnown RBP3.12□□□□□ -1.91
LINC01088-211ENST00000515597 NYXQ9GZU5 481 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 FN3KQ9H479 309 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 XAB2Q9HCS7 855 aaKnown RBP3.12□□□□□ -1.91
LINC01088-211ENST00000515597 B3GAT2Q9NPZ5 323 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.12□□□□□ -1.91
LINC01088-211ENST00000515597 CTSZQ9UBR2 303 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 RARRES3Q9UL19 164 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 KLF2Q9Y5W3 355 aaPredicted RBP3.12□□□□□ -1.91
LINC01088-211ENST00000515597 UBR1Q8IWV7 1749 aa3.12□□□□□ -1.91
LINC01088-211ENST00000515597 LRRC9Q6ZRR7 1453 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 RALGAPBQ86X10 1494 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 SLIT1O75093 1534 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 FAM135AQ9P2D6 1515 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 ACOD1A6NK06 481 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 SRRM5B3KS81 715 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 TFECO14948 347 aaPredicted RBP3.11□□□□□ -1.91
LINC01088-211ENST00000515597 LUC7L3O95232 432 aaKnown RBP3.11□□□□□ -1.91
LINC01088-211ENST00000515597 CYP11B2P19099 503 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 ITIH1P19827 911 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 AZGP1P25311 298 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms