RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 CDH3P22223 829 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 CPT2P23786 658 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 ASCL1P50553 236 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 RAB28P51157 221 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 ERVK11-1P61568 191 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 IRX3P78415 501 aaPredicted RBP5.1□□□□□ -1.59
NIPBL-203ENST00000503274 TAF10Q12962 218 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 SPP2Q13103 211 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 KYNUQ16719 465 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 UGP2Q16851 508 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 UGT3A2Q3SY77 523 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 ZFP69Q49AA0 526 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 RBPMS2Q6ZRY4 209 aaKnown RBP5.1□□□□□ -1.59
NIPBL-203ENST00000503274 ZBTB49Q6ZSB9 765 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 MAML2Q8IZL2 1156 aaPredicted RBP5.1□□□□□ -1.59
NIPBL-203ENST00000503274 XXYLT1Q8NBI6 393 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 MRGPRDQ8TDS7 321 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 DYRK2Q92630 601 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 WBP2Q969T9 261 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 MOB3AQ96BX8 217 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 PITPNM3Q9BZ71 974 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 WDR13Q9H1Z4 485 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 TRIOBPQ9H2D6 2365 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 ATAD3AQ9NVI7 634 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 P4HTMQ9NXG6 502 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 CLIC5Q9NZA1 410 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 RNF150Q9ULK6 438 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 AGTPBP1Q9UPW5 1226 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 TMED3Q9Y3Q3 217 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 PYGO1Q9Y3Y4 419 aa5.1□□□□□ -1.59
NIPBL-203ENST00000503274 COL2A1P02458 1487 aaPredicted RBP5.09□□□□□ -1.59
NIPBL-203ENST00000503274 MEIOCA2RUB1 952 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 C2orf81A6NN90 581 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 C19orf81C9J6K1 198 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 PLOD3O60568 738 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 IDH1O75874 414 aaKnown RBP5.09□□□□□ -1.59
NIPBL-203ENST00000503274 CGAP01215 116 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 CCL5P13501 91 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 CEBPBP17676 345 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 PTGER4P35408 488 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 RPL21P46778 160 aaKnown RBP5.09□□□□□ -1.59
NIPBL-203ENST00000503274 MCMDC2Q4G0Z9 681 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 XKR3Q5GH77 459 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 KRT39Q6A163 491 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 KRT80Q6KB66 452 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 RPUSD3Q6P087 351 aaKnown RBP5.09□□□□□ -1.59
NIPBL-203ENST00000503274 PSRC1Q6PGN9 363 aaPredicted RBP5.09□□□□□ -1.59
NIPBL-203ENST00000503274 SLC4A11Q8NBS3 891 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 HDAC11Q96DB2 347 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 FAM20AQ96MK3 541 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 CFAP57Q96MR6 1250 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 FEVQ99581 238 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 OR2B2Q9GZK3 357 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 TRPV4Q9HBA0 871 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 AATFQ9NY61 560 aaKnown RBP eCLIP5.09□□□□□ -1.59
NIPBL-203ENST00000503274 GRID1Q9ULK0 1009 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 STUB1Q9UNE7 303 aa5.09□□□□□ -1.59
NIPBL-203ENST00000503274 DNAH12Q6ZR08 3092 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 RFX7Q2KHR2 1363 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 SLCO2B1O94956 709 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 ATP5BP06576 529 aaKnown RBP5.08□□□□□ -1.6
NIPBL-203ENST00000503274 NKX2-1P43699 371 aaPredicted RBP5.08□□□□□ -1.6
NIPBL-203ENST00000503274 CCR10P46092 362 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 LHX1P48742 406 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 BMXP51813 675 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 PPP5CP53041 499 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 LIMK1P53667 647 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 HMGCS2P54868 508 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 BACE1P56817 501 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 SNRPD1P62314 119 aaKnown RBP5.08□□□□□ -1.6
NIPBL-203ENST00000503274 RBPJQ06330 500 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 CUL3Q13618 768 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 ITGA7Q13683 1181 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 SQLEQ14534 574 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 TMEM187Q14656 261 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 KCTD2Q14681 263 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 C14orf177Q52M58 125 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 PDLIM3Q53GG5 364 aaPredicted RBP5.08□□□□□ -1.6
NIPBL-203ENST00000503274 ADAMTSL4-AS1Q5T5F5 129 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 CST9LP1Q5W188 147 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 BHLHB9Q6PI77 547 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 KIRREL3Q8IZU9 778 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 ANKRD13CQ8N6S4 541 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 ART5Q96L15 291 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 CPNE1Q99829 537 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 PANK2Q9BZ23 570 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 FAM207AQ9NSI2 230 aaPredicted RBP5.08□□□□□ -1.6
NIPBL-203ENST00000503274 CACNG5Q9UF02 275 aa5.08□□□□□ -1.6
NIPBL-203ENST00000503274 DOCK2Q92608 1830 aa5.07□□□□□ -1.6
NIPBL-203ENST00000503274 RBBP6Q7Z6E9 1792 aaKnown RBP5.07□□□□□ -1.6
NIPBL-203ENST00000503274 ZBED9Q6R2W3 1325 aa5.07□□□□□ -1.6
NIPBL-203ENST00000503274 ZNF821O75541 412 aaPredicted RBP5.07□□□□□ -1.6
NIPBL-203ENST00000503274 EEF1B2P24534 225 aaKnown RBP5.07□□□□□ -1.6
NIPBL-203ENST00000503274 EEF1DP29692 281 aaKnown RBP5.07□□□□□ -1.6
NIPBL-203ENST00000503274 POLR2LP62875 67 aaKnown RBP5.07□□□□□ -1.6
NIPBL-203ENST00000503274 CCNA1P78396 465 aa5.07□□□□□ -1.6
NIPBL-203ENST00000503274 PPARDQ03181 441 aa5.07□□□□□ -1.6
NIPBL-203ENST00000503274 VEZF1Q14119 521 aa5.07□□□□□ -1.6
NIPBL-203ENST00000503274 HERC3Q15034 1050 aa5.07□□□□□ -1.6
NIPBL-203ENST00000503274 TCP11X2Q5H9J9 407 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms