RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 SEC16BQ96JE7 1060 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 TRIM54Q9BYV2 358 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 IQCGQ9H095 443 aaKnown RBP12.55□□□□□ -0.4
ERCC3-209ENST00000494464 SEMA3GQ9NS98 782 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 ABCF3Q9NUQ8 709 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 ARL15Q9NXU5 204 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 C5AR2Q9P296 337 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 GRID1Q9ULK0 1009 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 HS3ST3B1Q9Y662 390 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 MAU2Q9Y6X3 613 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 KCNE1BA0A087WTH5 132 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 H7BY64 318 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 SOCS6O14544 535 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 DPM1O60762 260 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 GLRA3O75311 464 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 ALDOAP04075 364 aaKnown RBP12.54□□□□□ -0.4
ERCC3-209ENST00000494464 SERPINB8P50452 374 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 CSNK1G2P78368 415 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 FOXK1P85037 733 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 OCA2Q04671 838 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 NAE1Q13564 534 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 MYBPC3Q14896 1274 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 PPP1R3AQ16821 1122 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 MROH9Q5TGP6 573 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 CAPN13Q6MZZ7 669 aaPredicted RBP12.54□□□□□ -0.4
ERCC3-209ENST00000494464 VN1R4Q7Z5H5 301 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 PLD3Q8IV08 490 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 GALNT16Q8N428 558 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 NKAPQ8N5F7 415 aaKnown RBP12.54□□□□□ -0.4
ERCC3-209ENST00000494464 CCDC197Q8NCU1 140 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 STT3BQ8TCJ2 826 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 LRRC8CQ8TDW0 803 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 ATL1Q8WXF7 558 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 COL26A1Q96A83 441 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 FBXL8Q96CD0 374 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 VPS39Q96JC1 886 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 VPS50Q96JG6 964 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 PRAP1Q96NZ9 151 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 HAUS8Q9BT25 410 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 CRB3Q9BUF7 120 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 DRC3Q9H069 523 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 ATG10Q9H0Y0 220 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 SOX17Q9H6I2 414 aaPredicted RBP12.54□□□□□ -0.4
ERCC3-209ENST00000494464 POPDC3Q9HBV1 291 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 C14orf105Q9NVL8 296 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 SLC17A7Q9P2U7 560 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 SH2B3Q9UQQ2 575 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 PLLPQ9Y342 182 aa12.54□□□□□ -0.4
ERCC3-209ENST00000494464 MYO18BQ8IUG5 2567 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 A0A1W2PQ72 361 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 A6NL46 340 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 FOXS1O43638 330 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 SNX3O60493 162 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 SORBS2O94875 1100 aaKnown RBP12.53□□□□□ -0.4
ERCC3-209ENST00000494464 ALPPP05187 535 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 ZGLP1P0C6A0 271 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 SLC26A3P40879 764 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 PGGT1BP53609 377 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 TAS2R39P59534 338 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 KLC1Q07866 573 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 AIMP2Q13155 320 aaKnown RBP12.53□□□□□ -0.4
ERCC3-209ENST00000494464 NDUFA9Q16795 377 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 ZXDCQ2QGD7 858 aaPredicted RBP12.53□□□□□ -0.4
ERCC3-209ENST00000494464 KIRREL2Q6UWL6 708 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 TMEM207Q6UWW9 146 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 YTHDF3Q7Z739 585 aaKnown RBP12.53□□□□□ -0.4
ERCC3-209ENST00000494464 AMER3Q8N944 861 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 RAB3IL1Q8TBN0 382 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 MIEF2Q96C03 454 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 PAIP2Q9BPZ3 127 aaKnown RBP12.53□□□□□ -0.4
ERCC3-209ENST00000494464 SARGQ9BW04 601 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 TGIF2Q9GZN2 237 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 ATP13A2Q9NQ11 1180 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 FGFR1OP2Q9NVK5 253 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 FBXL4Q9UKA2 621 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 MAP4K5Q9Y4K4 846 aa12.53□□□□□ -0.4
ERCC3-209ENST00000494464 KLF11O14901 512 aa12.52□□□□□ -0.41
ERCC3-209ENST00000494464 PCDH17O14917 1159 aa12.52□□□□□ -0.41
ERCC3-209ENST00000494464 IPO13O94829 963 aaKnown RBP12.52□□□□□ -0.41
ERCC3-209ENST00000494464 WISP3O95389 354 aaPredicted RBP12.52□□□□□ -0.41
ERCC3-209ENST00000494464 NSA2O95478 260 aaKnown RBP12.52□□□□□ -0.41
ERCC3-209ENST00000494464 GSTA1P08263 222 aa12.52□□□□□ -0.41
ERCC3-209ENST00000494464 CDH1P12830 882 aa12.52□□□□□ -0.41
ERCC3-209ENST00000494464 NPPBP16860 134 aa12.52□□□□□ -0.41
ERCC3-209ENST00000494464 GRK3P35626 688 aa12.52□□□□□ -0.41
ERCC3-209ENST00000494464 CD97P48960 835 aa12.52□□□□□ -0.41
ERCC3-209ENST00000494464 CDKL1Q00532 357 aa12.52□□□□□ -0.41
ERCC3-209ENST00000494464 POU4F1Q01851 419 aa12.52□□□□□ -0.41
ERCC3-209ENST00000494464 ZNF460Q14592 562 aa12.52□□□□□ -0.41
ERCC3-209ENST00000494464 RBBP7Q16576 425 aa12.52□□□□□ -0.41
ERCC3-209ENST00000494464 NADK2Q4G0N4 442 aa12.52□□□□□ -0.41
ERCC3-209ENST00000494464 COLEC12Q5KU26 742 aa12.52□□□□□ -0.41
ERCC3-209ENST00000494464 C6orf89Q6UWU4 347 aa12.52□□□□□ -0.41
ERCC3-209ENST00000494464 IGFL3Q6UXB1 125 aa12.52□□□□□ -0.41
ERCC3-209ENST00000494464 SHISA6Q6ZSJ9 500 aa12.52□□□□□ -0.41
ERCC3-209ENST00000494464 ADAMTSL2Q86TH1 951 aa12.52□□□□□ -0.41
ERCC3-209ENST00000494464 LCA5Q86VQ0 697 aa12.52□□□□□ -0.41
ERCC3-209ENST00000494464 TRIM42Q8IWZ5 723 aa12.52□□□□□ -0.41
ERCC3-209ENST00000494464 ANKS4BQ8N8V4 417 aa12.52□□□□□ -0.41
ERCC3-209ENST00000494464 CAMKVQ8NCB2 501 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms