RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 PROKR1Q8TCW9 393 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 TRAPPC9Q96Q05 1148 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 OR2A5Q96R48 311 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 CENPKQ9BS16 269 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 RTKNQ9BST9 563 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 SLC25A23Q9BV35 468 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 MRPL1Q9BYD6 325 aaKnown RBP13.53□□□□□ -0.24
VPS26A-205ENST00000489656 C1orf21Q9H246 121 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 LRMDAQ9H2I8 198 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 OR51B5Q9H339 312 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 CCDC167Q9P0B6 97 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 MCM8Q9UJA3 840 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 GMEB2Q9UKD1 530 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 ADAM29Q9UKF5 820 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 MAPRE3Q9UPY8 281 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 KLHL20Q9Y2M5 609 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 ASCC3Q8N3C0 2202 aaKnown RBP13.53□□□□□ -0.24
VPS26A-205ENST00000489656 NUP214P35658 2090 aaPredicted RBP13.52□□□□□ -0.24
VPS26A-205ENST00000489656 LRIT2A6NDA9 550 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 BBIP1A8MTZ0 92 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 NDUFS4O43181 175 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 B4GAT1O43505 415 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 DUX1O43812 170 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 CTSVO60911 334 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 C9P02748 559 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 RETP07949 1114 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 HOXB3P14651 431 aaPredicted RBP13.52□□□□□ -0.25
VPS26A-205ENST00000489656 CD1EP15812 388 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 CDH3P22223 829 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 PTPN4P29074 926 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 GSTM5P46439 218 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 ASMTP46597 345 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 CLNS1AP54105 237 aaKnown RBP13.52□□□□□ -0.25
VPS26A-205ENST00000489656 UFM1P61960 85 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 CYP4F2P78329 520 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 HYAL2Q12891 473 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 STX5Q13190 355 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 PTGR1Q14914 329 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 COQ5Q5HYK3 327 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 IRGCQ6NXR0 463 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 DBX2Q6ZNG2 339 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 ASRGL1Q7L266 308 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 PAGE2Q7Z2X7 111 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 COMMD6Q7Z4G1 85 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 VN1R4Q7Z5H5 301 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 MINDY1Q8N5J2 469 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 C19orf47Q8N9M1 422 aaKnown RBP13.52□□□□□ -0.25
VPS26A-205ENST00000489656 NAT6Q93015 286 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 RGMAQ96B86 450 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 ZDHHC12Q96GR4 267 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 PPM1MQ96MI6 270 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 TMEM74Q96NL1 305 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 ZFYVE21Q9BQ24 234 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 ZNF717Q9BY31 904 aaPredicted RBP13.52□□□□□ -0.25
VPS26A-205ENST00000489656 SLC6A16Q9GZN6 736 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 AICDAQ9GZX7 198 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 SYNPO2LQ9H987 977 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 SLC52A3Q9NQ40 469 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 DNAAF2Q9NVR5 837 aaKnown RBP13.52□□□□□ -0.25
VPS26A-205ENST00000489656 SEMA5BQ9P283 1151 aa13.52□□□□□ -0.25
VPS26A-205ENST00000489656 WBP11Q9Y2W2 641 aaKnown RBP13.52□□□□□ -0.25
VPS26A-205ENST00000489656 MN1Q10571 1320 aaPredicted RBP13.52□□□□□ -0.25
VPS26A-205ENST00000489656 COL27A1Q8IZC6 1860 aaPredicted RBP13.52□□□□□ -0.25
VPS26A-205ENST00000489656 SPTBP11277 2137 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 EME2A4GXA9 379 aaPredicted RBP13.51□□□□□ -0.25
VPS26A-205ENST00000489656 PLPP1O14494 284 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 CAPN5O15484 640 aaPredicted RBP13.51□□□□□ -0.25
VPS26A-205ENST00000489656 PCDH7O60245 1069 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 PVRP15151 417 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 ST6GAL1P15907 406 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 TACR1P25103 407 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 IL12AP29459 219 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 ALDH4A1P30038 563 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 HNRNPH1P31943 449 aaKnown RBP13.51□□□□□ -0.25
VPS26A-205ENST00000489656 BSGP35613 385 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 TSFMP43897 325 aaKnown RBP13.51□□□□□ -0.25
VPS26A-205ENST00000489656 POLR2JP52435 117 aaKnown RBP13.51□□□□□ -0.25
VPS26A-205ENST00000489656 OR1D5P58170 312 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 RGS1Q08116 209 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 SUZ12Q15022 739 aaKnown RBP13.51□□□□□ -0.25
VPS26A-205ENST00000489656 PROX2Q3B8N5 592 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 MANEAQ5SRI9 462 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 WDR74Q6RFH5 385 aaPredicted RBP13.51□□□□□ -0.25
VPS26A-205ENST00000489656 SPRED1Q7Z699 444 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 ASPGQ86U10 573 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 PLXDC1Q8IUK5 500 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 RIMKLAQ8IXN7 391 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 EID2Q8N6I1 236 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 SUMF1Q8NBK3 374 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 SRFBP1Q8NEF9 429 aaKnown RBP13.51□□□□□ -0.25
VPS26A-205ENST00000489656 OR2I1PQ8NGU4 316 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.51□□□□□ -0.25
VPS26A-205ENST00000489656 STARD8Q92502 1023 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 CCDC74AQ96AQ1 378 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 TCTN2Q96GX1 697 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 AHCYL2Q96HN2 611 aaKnown RBP13.51□□□□□ -0.25
VPS26A-205ENST00000489656 TEX37Q96LM6 180 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 QRFPRQ96P65 431 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 F2RL3Q96RI0 385 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 ZBTB18Q99592 522 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms