RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 SNRNP200O75643 2136 aaKnown RBP6.67□□□□□ -1.34
BRCA1-216ENST00000484087 PTPRQQ9UMZ3 2332 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 A0A088AWK7 358 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 IGHV5-10-1A0A0J9YXX1 117 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 SLC5A10A0PJK1 596 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 TMEM8BA6NDV4 472 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 PRR19A6NJB7 356 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 GPR89AB7ZAQ6 455 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 IFRD1O00458 451 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 MRASO14807 208 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 CLGNO14967 610 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 KMOO15229 486 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 UGDHO60701 494 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 PRAMEF10O60809 474 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 PSIP1O75475 530 aaKnown RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 SLC22A3O75751 556 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 POP7O75817 140 aaKnown RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 TNFSF15O95150 251 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 PSMG1O95456 288 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 RPN2P04844 631 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 ALDOCP09972 364 aaKnown RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 GPR89BP0CG08 455 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 PRR35P0CG20 571 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 GPX3P22352 226 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 ME2P23368 584 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 HALP42357 657 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 GDF5P43026 501 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 PREPP48147 710 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 MRPL19P49406 292 aaKnown RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 CLCNKAP51800 687 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 MTTPP55157 894 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 ACTR3P61158 418 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 UBE2IP63279 158 aaKnown RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 EMX2Q04743 252 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 ZNF33BQ06732 778 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 TRAF3Q13114 568 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 RPA4Q13156 261 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 LRP8Q14114 963 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 GRB7Q14451 532 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 C18orf21Q32NC0 220 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 PTCHD3Q3KNS1 767 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 TBC1D25Q3MII6 688 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 GGTA1PQ4G0N0 100 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 PDCD4Q53EL6 469 aaKnown RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 OXLD1Q5BKU9 147 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 XKR7Q5GH72 579 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 COQ5Q5HYK3 327 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 CACHD1Q5VU97 1274 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 REP15Q6BDI9 236 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 AAGABQ6PD74 315 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 IYDQ6PHW0 289 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 PAOXQ6QHF9 649 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 SCIMPQ6UWF3 145 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 HACD2Q6Y1H2 254 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 RIPOR1Q6ZS17 1223 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 RAB11FIP2Q7L804 512 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 VRK3Q8IV63 474 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 ENDOVQ8N8Q3 282 aaKnown RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 LMNTD1Q8N9Z9 388 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 OR2L2Q8NH16 312 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 DLG3Q92796 817 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 ROPN1LQ96C74 230 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 CLPTM1LQ96KA5 538 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 LINC00615Q96LM1 132 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 ZBTB18Q99592 522 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 SLC38A3Q99624 504 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 NPAS2Q99743 824 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 CTRCQ99895 268 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 HOPXQ9BPY8 73 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 NRSN2Q9GZP1 204 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 POLR1BQ9H9Y6 1135 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 SDR39U1Q9NRG7 319 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 IMP3Q9NV31 184 aaKnown RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 AIG1Q9NVV5 245 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 OCIAD1Q9NX40 245 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 ZIM2Q9NZV7 527 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 CPNE7Q9UBL6 633 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 CIDEBQ9UHD4 219 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 ZNF225Q9UK10 706 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 CROTQ9UKG9 612 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 ZNF490Q9ULM2 529 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 ASB1Q9Y576 335 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 DNMT3AQ9Y6K1 912 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 BOD1L1Q8NFC6 3051 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 BSNQ9UPA5 3926 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 CCDC187A0A096LP49 1063 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 A0A1B0GTL3 188 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 KRT87PA6NCN2 255 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 MGAT4DA6NG13 374 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 CCDC154A6NI56 674 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 H0Y3Z8 333 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 NR5A2O00482 541 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 PLD2O14939 933 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 KIF1CO43896 1103 aaKnown RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 PRMT3O60678 531 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 PDE5AO76074 875 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 CPNE6O95741 557 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 CDK4P11802 303 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 MAPK1P28482 360 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms