RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 AMZ1Q400G9 498 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 FNBP1LQ5T0N5 605 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 SUSD4Q5VX71 490 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 FAM109BQ6ICB4 259 aaPredicted RBP3.91□□□□□ -1.78
VPS13D-207ENST00000476169 CTR9Q6PD62 1173 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 CD164L2Q6UWJ8 174 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 BNIPLQ7Z465 357 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 ADGRD2Q7Z7M1 963 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 TMPRSS12Q86WS5 348 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 PRAG1Q86YV5 1406 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 LRRC17Q8N6Y2 441 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 BCORP1Q8N888 145 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 STKLD1Q8NE28 680 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 DQX1Q8TE96 717 aaKnown RBP3.91□□□□□ -1.78
VPS13D-207ENST00000476169 RNF128Q8TEB7 428 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 U2AF1L4Q8WU68 220 aaKnown RBP3.91□□□□□ -1.78
VPS13D-207ENST00000476169 FBXO32Q969P5 355 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 LGALS12Q96DT0 336 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 OXNAD1Q96HP4 312 aaPredicted RBP3.91□□□□□ -1.78
VPS13D-207ENST00000476169 URB1-AS1Q96HZ7 61 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 FAM84BQ96KN1 310 aaPredicted RBP3.91□□□□□ -1.78
VPS13D-207ENST00000476169 PCDHB18PQ96TA0 734 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 PLIN2Q99541 437 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 CCDC77Q9BR77 488 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 ZPBPQ9BS86 351 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 MRIQ9BWK5 157 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 TBC1D10AQ9BXI6 508 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 NMNAT2Q9BZQ4 307 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 MIS12Q9H081 205 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 ACKR4Q9NPB9 350 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 FAM207AQ9NSI2 230 aaPredicted RBP3.91□□□□□ -1.78
VPS13D-207ENST00000476169 ATXN10Q9UBB4 475 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 LRWD1Q9UFC0 647 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 PSORS1C1Q9UIG5 152 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 CLEC4AQ9UMR7 237 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 TNNQ9UQP3 1299 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 NCKAP1Q9Y2A7 1128 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 TMED7Q9Y3B3 224 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 KLK4Q9Y5K2 254 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 NSD2O96028 1365 aa3.9□□□□□ -1.78
VPS13D-207ENST00000476169 TRAV18A0A075B6X5 111 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 ARPC4-TTLL3A0A0A6YYG9 625 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 IGHV4-28A0A0C4DH34 117 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 A0A1W2PP11 408 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 XKRY2A2RUG3 117 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 GOLGA6L9A6NEM1 432 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 ZSCAN5BA6NJL1 495 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 C17orf105B2RV13 164 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 NPIPA3F8WFD2 350 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 BOLA2-SMG1P6H3BVE0 249 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 M0R296 226 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 GAPDHSO14556 408 aaPredicted RBP3.9□□□□□ -1.79
VPS13D-207ENST00000476169 DVL1O14640 695 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 ADAM12O43184 909 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 RGS14O43566 566 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 SPRY3O43610 288 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 BUD23O43709 281 aaKnown RBP3.9□□□□□ -1.79
VPS13D-207ENST00000476169 AKAP8O43823 692 aaKnown RBP3.9□□□□□ -1.79
VPS13D-207ENST00000476169 GPRIN2O60269 458 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 TBX19O60806 448 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 CSO75390 466 aaKnown RBP3.9□□□□□ -1.79
VPS13D-207ENST00000476169 ZNF821O75541 412 aaPredicted RBP3.9□□□□□ -1.79
VPS13D-207ENST00000476169 GRAP2O75791 330 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 SOX30O94993 753 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 WDPCPO95876 746 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 ZCCHC18P0CG32 403 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 CKMT2P17540 419 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 POLR2CP19387 275 aaPredicted RBP3.9□□□□□ -1.79
VPS13D-207ENST00000476169 DLSTP36957 453 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 PTGER3P43115 390 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 NUMBP49757 651 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 GEMP55040 296 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 RPS18P62269 152 aaKnown RBP3.9□□□□□ -1.79
VPS13D-207ENST00000476169 CX3CL1P78423 397 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 TNFRSF17Q02223 184 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 PLD1Q13393 1074 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 CDH18Q13634 790 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 RFTN1Q14699 578 aaPredicted RBP3.9□□□□□ -1.79
VPS13D-207ENST00000476169 PPP1R7Q15435 360 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 UGT3A2Q3SY77 523 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 PHLDA2Q53GA4 152 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 ZNF542PQ5EBM4 170 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 ARMCX4Q5H9R4 360 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 SPATA46Q5T0L3 261 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 NDUFAF5Q5TEU4 345 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 IL23RQ5VWK5 629 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 NCR3LG1Q68D85 454 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 FIP1L1Q6UN15 594 aaKnown RBP3.9□□□□□ -1.79
VPS13D-207ENST00000476169 MRPL10Q7Z7H8 261 aaKnown RBP3.9□□□□□ -1.79
VPS13D-207ENST00000476169 TDHQ8IZJ6 230 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 GBP7Q8N8V2 638 aaPredicted RBP3.9□□□□□ -1.79
VPS13D-207ENST00000476169 SIDT2Q8NBJ9 832 aaKnown RBP3.9□□□□□ -1.79
VPS13D-207ENST00000476169 NPEPL1Q8NDH3 523 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 OR11H4Q8NGC9 324 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 OR13J1Q8NGT2 312 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 AKR7LQ8NHP1 331 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 AGR3Q8TD06 166 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 GANCQ8TET4 914 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 UBTD2Q8WUN7 234 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 METTL21AQ8WXB1 218 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms