RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 NDUFAF4Q9P032 175 aa17.95■□□□□ 0.46
ECHDC1-214ENST00000474289 NUP50Q9UKX7 468 aa17.95■□□□□ 0.46
ECHDC1-214ENST00000474289 MOXD2PA6NHM9 499 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 TMEM229AB2RXF0 380 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 ZNF670-ZNF695F2Z2N8 137 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 SUV39H1O43463 412 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 PDYNP01213 254 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 NUDT7P0C024 238 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 LPOP22079 712 aaPredicted RBP17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 CSTF2P33240 577 aaKnown RBP eCLIP17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 RGRP47804 291 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 TBX4P57082 545 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 POU6F2P78424 691 aaPredicted RBP17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 HSPA14Q0VDF9 509 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 DUOXA1Q1HG43 343 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 PLET1Q6UQ28 207 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 CPA6Q8N4T0 437 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 GDPD1Q8N9F7 314 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 LPCAT1Q8NF37 534 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 MARVELD3Q96A59 401 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 HHIPQ96QV1 700 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 B3GNT2Q9NY97 397 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 TEX51A0A1B0GUA7 166 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 OR5K3A6NET4 321 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 SCAMP3O14828 347 aaKnown RBP17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 ACADMP11310 421 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 PRPS2P11908 318 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 TNFRSF1BP20333 461 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 PSMA3P25788 255 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 OR1E1P30953 314 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 PTGER3P43115 390 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 PCDH1Q08174 1060 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 PTPRRQ15256 657 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 PXDC1Q5TGL8 231 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 ALG1LQ6GMV1 187 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 SLC44A2Q8IWA5 706 aaPredicted RBP17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 DIRAS2Q96HU8 199 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 EXOC2Q96KP1 924 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 C8orf48Q96LL4 319 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 B3GNT4Q9C0J1 378 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 P2RY12Q9H244 342 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 OARD1Q9Y530 152 aa17.94■□□□□ 0.46
ECHDC1-214ENST00000474289 MAGEB17A8MXT2 336 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 ADAMDEC1O15204 470 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 TRIM3O75382 744 aaPredicted RBP17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 PRLP01236 227 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 THP07101 528 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 ANXA8P13928 327 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 PSMA1P25786 263 aaKnown RBP17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 MAPK12P53778 367 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 VEZF1Q14119 521 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 CCNJQ5T5M9 372 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 LGI4Q8N135 537 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 SYNPOQ8N3V7 929 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 OR9Q2Q8NGE9 314 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 SPPL2AQ8TCT8 520 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 PDFQ9HBH1 243 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 GLTPQ9NZD2 209 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 EIF3KQ9UBQ5 218 aaKnown RBP17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 ALPK3Q96L96 1907 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 A0A1W2PQL4 384 aaPredicted RBP17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 WWP2O00308 870 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 NBNO60934 754 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 CCNB2O95067 398 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 TSPAN19P0C672 248 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 CKMT1AP12532 417 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 POU2F1P14859 743 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 TAGLNQ01995 201 aaKnown RBP17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 GDPGP1Q6ZNW5 385 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 GPRC5AQ8NFJ5 357 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 RPRD1AQ96P16 312 aaPredicted RBP17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 ING3Q9NXR8 418 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 MAPRE3Q9UPY8 281 aa17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 LSM2Q9Y333 95 aaKnown RBP17.93■□□□□ 0.46
ECHDC1-214ENST00000474289 F2P00734 622 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 EPB42P16452 691 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 DDX5P17844 614 aaKnown RBP17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 DSC3Q14574 896 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 PYDC2Q56P42 97 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 DEFB132Q7Z7B7 95 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 OR4C15Q8NGM1 316 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 LRRC20Q8TCA0 184 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 CREB3L4Q8TEY5 395 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 HASPINQ8TF76 798 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 MAL2Q969L2 176 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 SLC25A46Q96AG3 418 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 MYEOVQ96EZ4 313 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 MGME1Q9BQP7 344 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 TRAF4Q9BUZ4 470 aaPredicted RBP17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 FAM126AQ9BYI3 521 aaPredicted RBP17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 MCUBQ9NWR8 336 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 SEC14L4Q9UDX3 406 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 HCN4Q9Y3Q4 1203 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 NLRC5Q86WI3 1866 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 TRAV19A0A0A6YYK7 116 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 SH3D21A4FU49 640 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 PDE9AO76083 593 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 ODC1P11926 461 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 NAGAP17050 411 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms